├── .editorconfig ├── .gitattributes ├── .gitignore ├── .travis.yml ├── LICENSE ├── README.md ├── Snakefile ├── config.yaml ├── envs ├── samtools.yaml └── wgsim.yaml ├── reads ├── a.chr21.1.fq ├── a.chr21.2.fq ├── a.scerevisiae.1.fq ├── a.scerevisiae.2.fq ├── b.chr21.1.fq ├── b.chr21.2.fq ├── b.scerevisiae.1.fq └── b.scerevisiae.2.fq └── ref ├── annotation.chr21.gtf ├── dbsnp.vcf.gz ├── dbsnp.vcf.gz.tbi ├── dummy.gmt ├── genome.chr21.fa ├── genome.chr21.fa.fai └── transcriptome.chr21.fa /.editorconfig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/snakemake-workflows/ngs-test-data/HEAD/.editorconfig -------------------------------------------------------------------------------- /.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/snakemake-workflows/ngs-test-data/HEAD/.gitattributes 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