├── .github └── workflows │ ├── docker-publish.yml │ └── release.yml ├── CHANGELOG.md ├── Cargo.lock ├── Cargo.toml ├── Dockerfile ├── LICENSE.md ├── README.md ├── environment.yml ├── src ├── assess.rs ├── main.rs ├── merge.rs ├── readfetch.rs ├── reassemble.rs └── utility.rs └── test ├── bins ├── sample_ERR3404870_metabat2_results.574.fasta ├── sample_ERR3405181_metabat2_results.1030.fasta └── sample_ERR3405607_metabat2_results.63.fasta ├── mapids ├── ERR3404870_mapids └── ERR3405181_mapids ├── quality_report.tsv └── reads ├── ERR3404870_1.fastq ├── ERR3404870_2.fastq ├── ERR3405181_1.fastq └── ERR3405181_2.fastq /.github/workflows/docker-publish.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/soedinglab/MAGmax/HEAD/.github/workflows/docker-publish.yml -------------------------------------------------------------------------------- /.github/workflows/release.yml: 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