├── .github ├── stickers.png └── workflows │ ├── build.yml │ └── docker.yml ├── .gitignore ├── Dockerfile.backend ├── Dockerfile.frontend ├── LICENSE ├── Makefile ├── README.md ├── azure-pipelines.yml ├── backend ├── .dockerignore ├── .gitignore ├── alignment.go ├── complexsearchjob.go ├── config.go ├── databases.go ├── dbreader.go ├── decoder.go ├── decoder_test.go ├── decompress_middleware.go ├── folddiscojob.go ├── foldmasonmsa.go ├── go.mod ├── go.sum ├── indexjob.go ├── jobsystem.go ├── lookup.go ├── mail.go ├── mail_transports.go ├── main.go ├── msajob.go ├── pairjob.go ├── ratelimit.go ├── searchjob.go ├── server.go ├── structuresearchjob.go ├── templates.go ├── worker.go ├── worker_linux.go ├── worker_unix.go └── worker_windows.go ├── docker-compose ├── .dockerignore ├── .env ├── .gitignore ├── README.md ├── config.json ├── databases │ └── EMPTY ├── docker-compose-dev.yml ├── docker-compose.local.yml ├── docker-compose.yml ├── examples │ ├── pdb70 │ │ ├── pdb70.awk │ │ └── setup.sh │ ├── pfam │ │ └── setup.sh │ └── uniclust │ │ └── setup.sh ├── jobs │ └── EMPTY ├── nginx.conf └── setup_db.sh ├── docs ├── api.html ├── api │ ├── api.raml │ └── theme │ │ ├── LICENSE │ │ ├── api.html │ │ ├── examples.nunjucks │ │ ├── index.nunjucks │ │ ├── item.nunjucks │ │ └── resource.nunjucks ├── api_example.py ├── package-lock.json └── package.json ├── electron ├── build.js ├── context.js ├── dev-client.js ├── dev-runner.js ├── foldseek-wrapper.sh ├── index.dev.js ├── index.js ├── menu.js ├── mmseqs-wrapper.sh └── webpack.electron.config.js ├── frontend ├── .babelrc ├── Alignment.vue ├── AlignmentPanel.vue ├── ApiDialog.vue ├── App.vue ├── AppLocal.vue ├── Databases.vue ├── DragUploadBox.vue ├── FileButton.vue ├── FoldDiscoSearch.vue ├── FoldMasonSearch.vue ├── FolddiscoHitCluster.vue ├── History.vue ├── Identicon.vue ├── LigandMotifSelection.vue ├── LoadAcessionButton.vue ├── Local.vue ├── MDI.js ├── MSA.vue ├── MSALocal.vue ├── MSAView.vue ├── ModalDialog.vue ├── MotifFilter.vue ├── MotifSelection.vue ├── MultiSlider.vue ├── MultimerSearch.vue ├── Navigation.vue ├── NewDatabase.vue ├── Panel.vue ├── PredictStructureButton.vue ├── Preferences.vue ├── Queries.vue ├── QueryTextarea.vue ├── Queue.vue ├── Reference.vue ├── ResidueSpan.vue ├── Result.vue ├── ResultFoldDisco.vue ├── ResultFoldMason.vue ├── ResultLocal.vue ├── ResultMixin.vue ├── ResultSankeyMixin.vue ├── ResultView.vue ├── Ruler.vue ├── SankeyDiagram.vue ├── Search.vue ├── SequenceLogo.vue ├── StructureViewer.vue ├── StructureViewerMSA.vue ├── StructureViewerMixin.vue ├── StructureViewerMotif.vue ├── StructureViewerToolbar.vue ├── StructureViewerTooltip.vue ├── TMAlignWorker.js ├── TaxonomyAutocomplete.vue ├── Tree.vue ├── Utilities.js ├── assets │ ├── Protsolata.woff │ ├── Protsolata.woff2 │ ├── Protsolata_palettes.css │ ├── _variables.scss │ ├── app.pot │ ├── foldmason.en_US.po │ ├── foldseek.en_US.po │ ├── marv-error_1x.png │ ├── marv-error_2x.png │ ├── marv-error_3x.png │ ├── marv-foldmason-gray.png │ ├── marv-foldseek-small.png │ ├── marv-foldseek.png │ ├── marv-result_1x.png │ ├── marv-result_2x.png │ ├── marv-result_3x.png │ ├── marv-search-gray.png │ ├── marv-search_1x.png │ ├── marv-search_2x.png │ ├── marv-search_3x.png │ ├── marv1-square.svg │ ├── marv1.png │ ├── marv1.svg │ ├── mmseqs.en_US.po │ ├── spiration-dark.png │ ├── spiration-darker.png │ ├── style.css │ └── test.fa ├── index.ejs ├── index.html ├── lib │ ├── AxiosCompressRequest.js │ ├── BlobDatabase.js │ ├── ColorScale.js │ ├── ColorSpace.js │ ├── HistoryMixin.js │ ├── convertToQueryUrl.js │ ├── debounce.js │ ├── identicon.js │ ├── po-loader.js │ ├── po-reader.js │ ├── vue-simple-portal │ │ ├── LICENCE │ │ ├── components │ │ │ ├── Portal.js │ │ │ └── TargetContainer.js │ │ ├── config.js │ │ └── index.js │ └── zip.js ├── main.js ├── main_local.js ├── rankUtils.js └── webpack.frontend.config.js └── package.json /.github/stickers.png: 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