├── DeepTrack 1.0 ├── DeepTrack - Example 1a - Pretrained network.h5 ├── DeepTrack - Example 1a - Tracking single particle.ipynb ├── DeepTrack - Example 1a - Tracking single particle.pdf ├── DeepTrack - Example 1b - Training.ipynb ├── DeepTrack - Example 1b - Training.pdf ├── DeepTrack - Example 2 - Optically Trapped Particle Bad.mp4 ├── DeepTrack - Example 2 - Optically Trapped Particle Good.mp4 ├── DeepTrack - Example 2 - Pretrained network.h5 ├── DeepTrack - Example 2 - Tracking single particle.ipynb ├── DeepTrack - Example 2 - Tracking single particle.pdf ├── DeepTrack - Example 3 - Brownian Particles.mp4 ├── DeepTrack - Example 3 - Pretrained network.h5 ├── DeepTrack - Example 3 - Tracking multiple particles.ipynb ├── DeepTrack - Example 3 - Tracking multiple particles.pdf ├── DeepTrack - Example 4 - Bacteria - Pretrained network.h5 ├── DeepTrack - Example 4 - Brownian particles + bacteria.mp4 ├── DeepTrack - Example 4 - Particles - Pretrained network.h5 ├── DeepTrack - Example 4 - Tracking multiple particles.ipynb ├── DeepTrack - Example 4 - Tracking multiple particles.pdf ├── DeepTrack - Example 5 - Tracking particles in different focal planes.h5 ├── DeepTrack - Example 5 - Tracking particles in different focal planes.ipynb ├── DeepTrack - Example 5 - Tracking particles in different focal planes.mp4 ├── DeepTrack - Example 5 - Tracking particles in different focal planes.pdf ├── DeepTrack - Example 6 - Tracking vesicles.h5 ├── DeepTrack - Example 6 - Tracking vesicles.ipynb ├── DeepTrack - Example 6 - Tracking vesicles.pdf ├── DeepTrack - Example 6 - Vesicles SNR4 mid.mp4 ├── Video1.mp4 ├── Video2.mp4 ├── Video3.mp4 ├── Video4.mp4 ├── Video5.mp4 ├── Video6.mp4 ├── Video7.mp4 ├── Video8.mp4 └── deeptrack.py ├── LICENSE ├── README.md └── figures ├── DeepTrack architecture.png ├── sample_image_1.png ├── sample_image_10.png ├── sample_image_2.png ├── sample_image_3.png ├── sample_image_4.png ├── sample_image_5.png ├── sample_image_6.png ├── sample_image_7.png ├── 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