├── .gitattributes ├── .gitignore ├── CORE ├── fCutClassCORE.py ├── fDataWorkerCORE.py ├── fGraphBuilderCORE.py ├── fImageWorkerCORE.py └── fTheanoNNclassCORE.py ├── README.txt ├── cpuRun.sh ├── doc ├── HOWTO_Examples.rst ├── HOWTO_Install.rst ├── HOWTO_SimpleAutoEncoder.rst ├── HOWTO_SimplestExample.rst ├── Makefile ├── README ├── conf.py ├── doxygen │ ├── conf.dy │ └── doxypy │ │ ├── COPYING │ │ ├── README │ │ └── src │ │ ├── doxypy_updated.py │ │ └── setup.py ├── fCutClassCORE.rst ├── fDataWorkerCORE.rst ├── fGraphBuilderCORE.rst ├── fImageWorkerCORE.rst ├── fTheanoNNclassCORE.rst ├── index.rst └── src │ └── HOWTOs │ ├── Data │ └── CSVtoHDF.py │ ├── SimpleAutoEncoder.py │ ├── SimplestExample.py │ └── gpuRun.sh ├── example ├── LSTMexperiments │ ├── AVSC │ │ ├── Data │ │ │ ├── DBtoHDF_with_labels.py │ │ │ ├── DBtoHDF_without_labels.py │ │ │ ├── DataWorker.py │ │ │ ├── DataWorker_Labeled.py │ │ │ └── __init__.py │ │ ├── RNN.py │ │ ├── RNN_classifier.py │ │ ├── cpuRun.sh │ │ ├── fTheanoNNclassCORE.py │ │ └── gpuRun.sh │ ├── TNNF │ │ ├── __init__.py │ │ ├── fCutClassCORE.py │ │ ├── fDataWorkerCORE.py │ │ ├── fGraphBuilderCORE.py │ │ ├── fImageWorkerCORE.py │ │ └── fTheanoNNclassCORE.py │ ├── accumulate.png │ ├── accumulate_test.png │ ├── accuracy.png │ ├── accuracy_test.png │ ├── cpuRun.sh │ ├── dataGen.py │ ├── error.png │ ├── fPictureFF.png │ ├── fPictureFF2.png │ ├── gpuRun.sh │ ├── gpuRunCuda6.5.sh │ ├── main.png │ ├── main.py │ ├── model │ ├── modelF │ ├── sin.png │ ├── sinG.png │ ├── sinG.py │ ├── sinG2.png │ ├── sinG2.py │ ├── sinGf.png │ ├── sinGf2.png │ ├── sinonly.png │ ├── sinonly.py │ ├── sinonly1.png │ ├── sinonlytest.py │ ├── sinonlytrain.png │ ├── sqr.png │ ├── sqrG.py │ ├── test.py │ ├── ~accumulate.png │ ├── ~error.png │ ├── ~error2.png │ ├── ~model │ ├── ~sinonlytrain.png │ └── ~~~sinonlytrain.png └── fSimple.py ├── gpuRun.sh ├── media ├── AE_MNIST_features_with_dropout.png ├── AE_MNIST_features_without_dropout.png ├── HOWTOs │ ├── AE_error.png │ ├── How_it_performs.gif │ ├── KL.png │ ├── NN_error.png │ ├── data_visualisation.png │ ├── multi_weights.gif │ └── multi_weights.png ├── data.png └── src │ └── data.vsd └── undeployed └── TheanoConv ├── AE ├── AE.py ├── AE_autosave.txt ├── AE_autosave_6x6.txt ├── AE_for_conv.txt ├── SSBweights_to_HDF.py ├── __init__.py ├── cpuRun.sh ├── cutter.py ├── fCutClassCORE.py ├── fTheanoNNclassCORE.py ├── gpuRun.sh ├── img │ ├── f.jpg │ ├── o.jpg │ └── t.jpg ├── train_cv_error.png └── weights │ ├── L1_0.jpg │ ├── L1_1.jpg │ ├── L1_10.jpg │ ├── L1_11.jpg │ ├── L1_12.jpg │ ├── L1_13.jpg │ ├── L1_14.jpg │ ├── L1_15.jpg │ ├── L1_16.jpg │ ├── L1_17.jpg │ ├── L1_18.jpg │ ├── L1_19.jpg │ ├── L1_2.jpg │ ├── L1_20.jpg │ ├── L1_21.jpg │ ├── L1_22.jpg │ ├── L1_23.jpg │ ├── L1_24.jpg │ ├── L1_25.jpg │ ├── L1_26.jpg │ ├── L1_27.jpg │ ├── L1_28.jpg │ ├── L1_29.jpg │ ├── L1_3.jpg │ ├── L1_30.jpg │ ├── L1_31.jpg │ ├── L1_4.jpg │ ├── L1_5.jpg │ ├── L1_6.jpg │ ├── L1_7.jpg │ ├── L1_8.jpg │ └── 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