├── .Rbuildignore ├── .github ├── .gitignore ├── CONTRIBUTING.md ├── FUNDING.yml ├── dependabot.yml └── workflows │ ├── R-CMD-check.yaml │ └── pkgdown.yaml ├── .gitignore ├── DESCRIPTION ├── LICENSE ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── RcppExports.R ├── augdat.R ├── cv_varsel.R ├── data.R ├── divergence_minimizers.R ├── extend_family.R ├── families.R ├── formula.R ├── gamm4.R ├── glmfun.R ├── helper_formula.R ├── latent.R ├── methods.R ├── misc.R ├── project.R ├── projfun.R ├── projpred-package.R ├── refmodel.R ├── search.R ├── summary_funs.R └── varsel.R ├── README.Rmd ├── README.md ├── _pkgdown.yml ├── cran-comments.md ├── data ├── df_binom.rda ├── df_gaussian.rda └── mesquite.rda ├── inst └── CITATION ├── man-roxygen └── args-newdata.R ├── man ├── as.matrix.projection.Rd ├── as_draws_matrix.projection.Rd ├── augdat-internals.Rd ├── augdat_ilink_binom.Rd ├── augdat_link_binom.Rd ├── break_up_matrix_term.Rd ├── cl_agg.Rd ├── cv-indices.Rd ├── cv_proportions.Rd ├── cv_varsel.Rd ├── df_binom.Rd ├── df_gaussian.Rd ├── do_call.Rd ├── extend_family.Rd ├── extra-families.Rd ├── figures │ └── logo.svg ├── force_search_terms.Rd ├── internal-global-options.Rd ├── mesquite.Rd ├── performances.Rd ├── plot.cv_proportions.Rd ├── plot.vsel.Rd ├── pred-projection.Rd ├── predict.refmodel.Rd ├── predictor_terms.Rd ├── print.projection.Rd ├── print.refmodel.Rd ├── print.vsel.Rd ├── print.vselsummary.Rd ├── project.Rd ├── projpred-package.Rd ├── ranking.Rd ├── refmodel-init-get.Rd ├── run_cvfun.Rd ├── solution_terms.Rd ├── suggest_size.Rd ├── summary.vsel.Rd ├── varsel.Rd └── y_wobs_offs.Rd ├── projpred.Rproj ├── src ├── Makevars ├── Makevars.win ├── RcppExports.cpp └── glmfun.cpp ├── tests ├── testthat.R └── testthat │ ├── helpers │ ├── args.R │ ├── creators.R │ ├── dummies.R │ ├── formul_handlers.R │ ├── getters.R │ ├── predictor_handlers.R │ ├── testers.R │ └── unlist_cust.R │ ├── setup.R │ ├── test_as_matrix.R │ ├── test_augdat.R │ ├── test_cvindices.R │ ├── 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