├── .gitignore ├── Makefile ├── Makefile.inc ├── copyrights ├── COPYING └── LICENSE.txt ├── src ├── FastQValidator.cpp └── Makefile └── test ├── .gitignore ├── FastQValidatorTest.sh ├── Makefile ├── README.txt ├── expectedResults ├── ExpectedResults0Errors.txt ├── ExpectedResults10Errors.txt ├── ExpectedResults10Errors5Report.txt ├── ExpectedResultsAutoDetect.txt ├── ExpectedResultsAutoDetectBGZ.txt ├── ExpectedResultsAutoDetectBGZnoeof.txt ├── ExpectedResultsAutoDetectBGZnoeofFail.txt ├── ExpectedResultsAutoDetectGZ.txt ├── ExpectedResultsBase.txt ├── ExpectedResultsBaseCompNoMessages.txt ├── ExpectedResultsColor.txt ├── ExpectedResultsColorLimitError.txt ├── ExpectedResultsDisableSeqID.txt ├── ExpectedResultsInterleaved.txt ├── ExpectedResultsMinRead2.txt ├── ExpectedResultsNoBaseComp.txt ├── ExpectedResultsNoBaseCompNoErrors.txt └── ExpectedResultsTestFile2.txt ├── interleaved.fastq ├── testFile.txt.bgz ├── testFile.txt.gz ├── testFile.txt.noeof.bgz └── testFile2.txt /.gitignore: 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