├── .gitignore ├── CITATION.cff ├── LICENSE ├── R ├── .gitignore ├── EIindex.R ├── computeALAMEEcovariance.R ├── computeALAMEEcovariance_var_total_runs_faster.R ├── convertAsikainenLastfmToALAAMEEFormat.R ├── convertConnect4BoardDirectorAffiliationsToALAAMEEFormatCentrality.R ├── convertEvtushenkoBoardDirectorAffiliationsToALAAMEEFormatCentrality.R ├── convertMatrixToArclist.R ├── convertMatrixToEdgelist.R ├── convertProject90giantComponentToPajekEdgelist.R ├── convertSNAPGemsecDeezerToEEformat.R ├── convertSNAPdeezerToEEformat.R ├── convertSNAPgithubToEEformat.R ├── convertSNAPhiggsTwitterToALAAMEEFormat.R ├── convertSNAPpokecToALAAMEEFormat.R ├── makeMLEresultstable.R ├── makeMLEresultstableFalsePositives.R ├── makeMLEresultstableFalsePositivesVarTotalRuns.R ├── makeMLEresultstableVarTotalRuns.R ├── plotALAAMEEResults.R ├── plotALAAMEESimpleDemoResults.R ├── plotALAAMEEsimFit.R ├── plotALAAMEEvsRandomDegreeDist.R ├── plotMLEresults.R ├── plotMLEresultsFalsePositivesVarTotalRuns.R ├── plotMLEresultsVarTotalRuns.R ├── plotSimulationDiagnostics.R ├── readFiles.R ├── readProject90Data.R ├── simFitPlots.R ├── snowballSample.R └── snowballSampleFromExampleData.R ├── README.md ├── examples ├── README ├── conditional │ ├── .gitignore │ ├── run_conditional_ee_example.sh │ ├── run_conditional_ee_example_parallel.sh │ └── run_conditional_sa_example.sh ├── data │ ├── bipartite │ │ ├── Inouye_Pyke_pollinator_web │ │ │ ├── .gitignore │ │ │ ├── README.txt │ │ │ ├── generateInouyePykeALAAMExample.R │ │ │ ├── generateInouyePykeALAAMExample.out │ │ │ ├── ino_matr_f.txt │ │ │ ├── inouye.pdf │ │ │ ├── inouye_1988.xls │ │ │ ├── inouye_alaam.paj │ │ │ ├── inouye_alaam_mpnet.clu │ │ │ ├── inouye_alaam_mpnet.pnet │ │ │ ├── inouye_alaam_mpnet_ALAAM.clu │ │ │ ├── inouye_alaam_mpnet_ALAAM_est.txt │ │ │ ├── inouye_alaam_mpnet_Network_M_0.txt │ │ │ ├── inouye_alaam_mpnet_Network_M_VPNet_Edges_0.txt │ │ │ ├── inouye_alaam_mpnet_Network_M_VPNet_Nodes_0.txt │ │ │ ├── inouye_alaam_mpnet_Network_X_0.txt │ │ │ ├── inouye_alaam_mpnet_model.txt │ │ │ ├── inouye_alaam_mpnet_update.txt │ │ │ ├── inouye_binattr.txt │ │ │ ├── inouye_bipartite.net │ │ │ ├── inouye_catattr.txt │ │ │ ├── inouye_contattr.txt │ │ │ ├── inouye_matrix.txt │ │ │ ├── inouye_outcome.txt │ │ │ ├── inouye_outcome_BNA.txt │ │ │ └── testing.txt │ │ └── tiny │ │ │ ├── .gitignore │ │ │ ├── generateTinyBipartiteExample.out │ │ │ ├── generateTinyBipartiteExample.py │ │ │ ├── testing.txt │ │ │ ├── tiny.pdf │ │ │ ├── tiny_biadjacency_matrix.txt │ │ │ ├── tiny_binattr.txt │ │ │ ├── tiny_bipartite.net │ │ │ ├── tiny_bipartite_mpnet_alaam.clu │ │ │ ├── tiny_bipartite_mpnet_alaam.pnet │ │ │ ├── tiny_bipartite_mpnet_alaam_ALAAM.clu │ │ │ ├── tiny_bipartite_mpnet_alaam_ALAAM_est.txt │ │ │ ├── tiny_bipartite_mpnet_alaam_Network_M_0.txt │ │ │ ├── tiny_bipartite_mpnet_alaam_Network_M_VPNet_Edges_0.txt │ │ │ ├── tiny_bipartite_mpnet_alaam_Network_M_VPNet_Nodes_0.txt │ │ │ ├── tiny_bipartite_mpnet_alaam_Network_M_changestats.txt │ │ │ ├── tiny_bipartite_mpnet_alaam_Network_X_0.txt │ │ │ ├── tiny_bipartite_mpnet_alaam_model.txt │ │ │ ├── tiny_bipartite_mpnet_alaam_update.txt │ │ │ ├── tiny_catattr.txt │ │ │ └── tiny_outcome.txt │ ├── directed │ │ └── HighSchoolFriendship │ │ │ ├── .gitignore │ │ │ ├── Friendship-network_data_2013.csv.gz │ │ │ ├── README.txt │ │ │ ├── convert_highschoolfriendship_directed_network_to_pajek_ALAAMEE_format.R │ │ │ ├── convert_highschoolfriendship_directed_network_to_pajek_ALAAMEE_format.out │ │ │ ├── get_adjacency_matrix.R │ │ │ ├── highschool_friendship_arclist.net │ │ │ ├── highschool_friendship_binattr.txt │ │ │ ├── highschool_friendship_catattr.txt │ │ │ ├── highschool_friendship_catattr_NA99999.txt │ │ │ ├── highschool_friendship_class2BIO3.txt │ │ │ ├── load_highschoolfriendship_directed_network.R │ │ │ └── metadata_2013.txt │ ├── karate_club │ │ ├── README │ │ ├── generateKarateClubExample.R │ │ ├── karate.net │ │ ├── karate.pdf │ │ ├── karate_binattr.txt │ │ ├── karate_catattr.txt │ │ ├── karate_contattr.txt │ │ └── karate_outcome.txt │ ├── simulated_n1000_bin_cont │ │ ├── README │ │ ├── binaryAttribute_50_50_n1000.txt │ │ ├── continuousAttributes_n1000.txt │ │ ├── n1000_kstar_simulate12750000.txt │ │ ├── parameter-n1000_bin_cont.txt │ │ └── sample-n1000_bin_cont3800000.txt │ └── simulated_n500_bin_cont2 │ │ ├── README │ │ ├── binaryAttribute_50_50_n500.txt │ │ ├── continuousAttributes_n500.txt │ │ ├── n500_kstar_simulate12750000.txt │ │ ├── parameter-n500_bin_cont.txt │ │ └── sample-n500_bin_cont6700000.txt ├── jobarray │ ├── .gitignore │ ├── Deezer │ │ ├── EE_ALAAMEE │ │ │ ├── .gitignore │ │ │ ├── computeALAAMstatisticsDeezer.py │ │ │ ├── get_times.sh │ │ │ ├── runALAAMEEDeezerParallel.py │ │ │ ├── runALAAMsimulateGoFDeezer.py │ │ │ ├── runALAAMsimulateGoFDeezerMoreStats.py │ │ │ ├── run_deezer_R_scripts_slurm_script.sh │ │ │ ├── run_deezer_jobarray_slurm_script.sh │ │ │ ├── run_simulate_gof_deezer_morestats_slurm_script.sh │ │ │ ├── run_simulate_gof_deezer_slurm_script.sh │ │ │ └── run_submit_deezer_process_jobarray_slurm_script.sh │ │ ├── SA_ALAAMEE │ │ │ ├── runALAAMSAdeezer.py │ │ │ └── run_deezer_sa_slurm_script.sh │ │ └── data │ │ │ ├── README.txt │ │ │ ├── deezer_europe.zip │ │ │ └── get_deezer_data_slurm_script.sh │ ├── GemsecDeezer │ │ ├── EE_ALAAMEE │ │ │ ├── .gitignore │ │ │ ├── computeALAAMstatisticsGemsecDeezerHR.py │ │ │ ├── computeALAAMstatisticsGemsecDeezerHU.py │ │ │ ├── computeALAAMstatisticsGemsecDeezerRO.py │ │ │ ├── extractModelStats_hr.py │ │ │ ├── extractModelStats_hu.py │ │ │ ├── extractModelStats_ro.py │ │ │ ├── get_times.sh │ │ │ ├── model.py │ │ │ ├── modelHR.py │ │ │ ├── modelHU.py │ │ │ ├── plot_model_degeneracy_checks.sh │ │ │ ├── runALAAMEEGemsecDeezerHRParallel.py │ │ │ ├── runALAAMEEGemsecDeezerHUParallel.py │ │ │ ├── runALAAMEEGemsecDeezerROParallel.py │ │ │ ├── runALAAMsimulateGoFGemsecDeezerHR.py │ │ │ ├── runALAAMsimulateGoFGemsecDeezerHU.py │ │ │ ├── runALAAMsimulateGoFGemsecDeezerRO.py │ │ │ ├── run_alaamee_gemsec_deezer_hr_parallel_slurm_script.sh │ │ │ ├── run_alaamee_gemsec_deezer_hu_parallel_slurm_script.sh │ │ │ ├── run_alaamee_gemsec_deezer_ro_parallel_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hr_R_scripts_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hr_jobarray_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hu_R_scripts_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hu_jobarray_slurm_script.sh │ │ │ ├── run_gemsec_deezer_ro_R_scripts_slurm_script.sh │ │ │ ├── run_gemsec_deezer_ro_jobarray_slurm_script.sh │ │ │ ├── run_simulate_gof_gemsec_deezer_hr_slurm_script.sh │ │ │ ├── run_simulate_gof_gemsec_deezer_hu_slurm_script.sh │ │ │ ├── run_simulate_gof_gemsec_deezer_ro_slurm_script.sh │ │ │ ├── run_submit_gemsec_deezer_hr_process_jobarray_slurm_script.sh │ │ │ ├── run_submit_gemsec_deezer_hu_process_jobarray_slurm_script.sh │ │ │ └── run_submit_gemsec_deezer_ro_process_jobarray_slurm_script.sh │ │ ├── EE_ALAAMEE_alternative │ │ │ ├── .gitignore │ │ │ ├── computeALAAMstatisticsGemsecDeezerHR.py │ │ │ ├── computeALAAMstatisticsGemsecDeezerHU.py │ │ │ ├── computeALAAMstatisticsGemsecDeezerRO.py │ │ │ ├── extractModelStats_hr.py │ │ │ ├── extractModelStats_hu.py │ │ │ ├── extractModelStats_ro.py │ │ │ ├── get_times.sh │ │ │ ├── model.py │ │ │ ├── modelHR.py │ │ │ ├── modelHU.py │ │ │ ├── plot_model_degeneracy_checks.sh │ │ │ ├── runALAAMEEGemsecDeezerHRParallel.py │ │ │ ├── runALAAMEEGemsecDeezerHUParallel.py │ │ │ ├── runALAAMEEGemsecDeezerROParallel.py │ │ │ ├── runALAAMsimulateGoFGemsecDeezerHR.py │ │ │ ├── runALAAMsimulateGoFGemsecDeezerHU.py │ │ │ ├── runALAAMsimulateGoFGemsecDeezerRO.py │ │ │ ├── run_alaamee_gemsec_deezer_hr_parallel_slurm_script.sh │ │ │ ├── run_alaamee_gemsec_deezer_hu_parallel_slurm_script.sh │ │ │ ├── run_alaamee_gemsec_deezer_ro_parallel_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hr_R_scripts_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hr_jobarray_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hu_R_scripts_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hu_jobarray_slurm_script.sh │ │ │ ├── run_gemsec_deezer_ro_R_scripts_slurm_script.sh │ │ │ ├── run_gemsec_deezer_ro_jobarray_slurm_script.sh │ │ │ ├── run_simulate_gof_gemsec_deezer_hr_slurm_script.sh │ │ │ ├── run_simulate_gof_gemsec_deezer_hu_slurm_script.sh │ │ │ ├── run_simulate_gof_gemsec_deezer_ro_slurm_script.sh │ │ │ ├── run_submit_gemsec_deezer_hr_process_jobarray_slurm_script.sh │ │ │ ├── run_submit_gemsec_deezer_hu_process_jobarray_slurm_script.sh │ │ │ └── run_submit_gemsec_deezer_ro_process_jobarray_slurm_script.sh │ │ ├── EE_ALAAMEE_igraph │ │ │ ├── .gitignore │ │ │ ├── computeALAAMstatisticsGemsecDeezerRO.py │ │ │ ├── model.py │ │ │ ├── readData.py │ │ │ ├── runALAAMEEGemsecDeezerROParallel.py │ │ │ ├── runALAAMsimulateGoFGemsecDeezerRO.py │ │ │ ├── run_alaamee_gemsec_deezer_ro_parallel_slurm_script.sh │ │ │ ├── run_gemsec_deezer_ro_R_scripts_slurm_script.sh │ │ │ ├── run_gemsec_deezer_ro_jobarray_slurm_script.sh │ │ │ ├── run_simulate_gof_gemsec_deezer_ro_slurm_script.sh │ │ │ └── run_submit_gemsec_deezer_ro_process_jobarray_slurm_script.sh │ │ ├── SA_ALAAMEE │ │ │ ├── .gitignore │ │ │ ├── runALAAMSAgemsecDeezerHR.py │ │ │ ├── runALAAMSAgemsecDeezerHU.py │ │ │ ├── runALAAMSAgemsecDeezerRO.py │ │ │ ├── run_gemsec_deezer_hr_sa_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hu_sa_slurm_script.sh │ │ │ └── run_gemsec_deezer_ro_sa_slurm_script.sh │ │ ├── SA_ALAAMEE_alternative │ │ │ ├── .gitignore │ │ │ ├── logisticRegressionGemsecDeezerRO.R │ │ │ ├── runALAAMSAgemsecDeezerHR.py │ │ │ ├── runALAAMSAgemsecDeezerHU.py │ │ │ ├── runALAAMSAgemsecDeezerRO.py │ │ │ ├── runALAAMSAgemsecDeezerRO_baseline.py │ │ │ ├── run_gemsec_deezer_hr_sa_slurm_script.sh │ │ │ ├── run_gemsec_deezer_hu_sa_slurm_script.sh │ │ │ ├── run_gemsec_deezer_ro_baseline_sa_slurm_script.sh │ │ │ └── run_gemsec_deezer_ro_sa_slurm_script.sh │ │ └── data │ │ │ ├── .gitignore │ │ │ ├── README.txt │ │ │ ├── SNAP_ Network datasets_ Graph Embedding with Self Clustering_ Facebook and Deezer.pdf │ │ │ ├── gemsec_deezer_dataset.tar.gz │ │ │ └── get_gemsec_deezer_data_slurm_script.sh │ ├── GitHub │ │ ├── EE_ALAAMEE │ │ │ ├── .gitignore │ │ │ ├── computeALAAMstatisticsGithub.py │ │ │ ├── extractModelStats.py │ │ │ ├── model.py │ │ │ ├── plot_model_degeneracy_check.sh │ │ │ ├── runALAAMEEGithubParallel.py │ │ │ ├── runALAAMsimulateGoFGithub.py │ │ │ ├── run_github_R_scripts_slurm_script.sh │ │ │ ├── run_github_jobarray_slurm_script.sh │ │ │ ├── run_github_parallel_slurm_script.sh │ │ │ ├── run_simulate_gof_github_slurm_script.sh │ │ │ └── run_submit_github_process_jobarray_slurm_script.sh │ │ └── data │ │ │ ├── .gitignore │ │ │ ├── README.txt │ │ │ └── get_github_data_slurm_script.sh │ ├── HiggsTwitter │ │ ├── data │ │ │ ├── .gitignore │ │ │ ├── README │ │ │ └── get_higgs_twitter_data_slurm_script.sh │ │ └── outcome_reply │ │ │ ├── .gitignore │ │ │ ├── computeALAAMstatisticsHiggs.py │ │ │ ├── model.py │ │ │ ├── runALAAMEEhiggsParallel.py │ │ │ ├── runALAAMsimulateGoFHiggs.py │ │ │ ├── run_higgs_R_scripts_slurm_script.sh │ │ │ ├── run_higgs_jobarray_slurm_script.sh │ │ │ ├── run_simulate_gof_higgs_slurm_script.sh │ │ │ └── run_submit_higgs_jobarray_estimation_jobs.sh │ ├── Pokec │ │ ├── EE_ALAAMEE │ │ │ ├── .gitignore │ │ │ ├── computeALAAMstatisticsPokec.py │ │ │ ├── runALAAMEEpokecParallel.py │ │ │ ├── runALAAMsimulateGoFPokec.py │ │ │ ├── run_pokec_R_scripts_slurm_script.sh │ │ │ ├── run_pokec_jobarray_slurm_script.sh │ │ │ ├── run_simulate_gof_pokec_slurm_script.sh │ │ │ └── run_submit_pokec_process_jobarray_slurm_script.sh │ │ ├── data │ │ │ ├── README │ │ │ └── get_pokec_data_slurm_script.sh │ │ └── directed_EE_ALAAMEE │ │ │ ├── .gitignore │ │ │ ├── computeALAAMstatisticsPokec.py │ │ │ ├── model.py │ │ │ ├── runALAAMEEpokecParallel.py │ │ │ ├── runALAAMsimulateGoFPokec.py │ │ │ ├── run_pokec_R_scripts_slurm_script.sh │ │ │ ├── run_pokec_jobarray_slurm_script.sh │ │ │ ├── run_pokec_parallel_slurm_script.sh │ │ │ ├── run_simulate_gof_pokec_slurm_script.sh │ │ │ └── run_submit_pokec_process_jobarray_slurm_script.sh │ ├── README │ ├── runALAAMsimulateGoFexample.py │ ├── run_karateclub_R_scripts_slurm_script.sh │ ├── run_karateclub_jobarray_slurm_script.sh │ ├── run_simple_N1000_R_scripts_slurm_script.sh │ ├── run_simple_R_scripts_slurm_script.sh │ ├── run_simple_example_N1000_jobarray_slurm_script.sh │ ├── run_simple_example_jobarray_slurm_script.sh │ ├── run_simulate_gof_example_slurm_script.sh │ ├── run_submit_karateclub_process_jobarray.sh │ ├── run_submit_simple_example_N1000_process_jobarray.sh │ └── run_submit_simple_example_process_jobarray.sh ├── parallel │ ├── .gitignore │ ├── bipartite │ │ ├── .gitignore │ │ ├── computeALAAMstatisticsBipartiteExample.py │ │ ├── runALAAMsimulateGoFBipartiteExample.py │ │ ├── run_bipartite_example_parallel_slurm_script.sh │ │ └── run_simulate_gof_bipartite_example_slurm_script.sh │ ├── directed │ │ ├── .gitignore │ │ └── run_simple_example_directed_parallel_slurm_script.sh │ ├── run_karateclub_parallel_slurm_script.sh │ └── run_simple_example_parallel_slurm_script.sh └── simple │ ├── .gitignore │ ├── TasmanianDevils │ ├── ALAAM │ │ ├── .gitignore │ │ ├── convertDevilDataToALAAMEEFormat.R │ │ ├── devils_DFTD_status_all.txt │ │ ├── devils_DFTD_status_mating.txt │ │ ├── devils_DFTD_status_nonmating.txt │ │ ├── devils_binattr_all.txt │ │ ├── devils_binattr_mating.txt │ │ ├── devils_binattr_nonmating.txt │ │ ├── devils_catattr_all.txt │ │ ├── devils_catattr_mating.txt │ │ ├── devils_catattr_nonmating.txt │ │ ├── devils_contact_all.net │ │ ├── devils_contact_mating.net │ │ ├── devils_contact_nonmating.net │ │ ├── devils_contattr_all.txt │ │ ├── devils_contattr_mating.txt │ │ ├── devils_contattr_nonmating.txt │ │ ├── runALAAMSAdevilsSimpleModel.py │ │ ├── runALAAMSAdevilsSimpleModel2.py │ │ ├── runALAAMSAdevilsSimpleModel2_mating.py │ │ ├── runALAAMSAdevilsSimpleModel2_nonmating.py │ │ ├── runALAAMSAdevilsStructModel.py │ │ ├── runALAAMSAdevilsStructModel1.py │ │ ├── runALAAMSAdevilsStructModel1_mating.py │ │ ├── runALAAMSAdevilsStructModel1_nonmating.py │ │ ├── runALAAMSAdevilsThesisModel.py │ │ ├── run_sa_devils_simple_model.sh │ │ ├── run_sa_devils_simple_model2.sh │ │ ├── run_sa_devils_simple_model2_mating.sh │ │ ├── run_sa_devils_simple_model2_nonmating.sh │ │ ├── run_sa_devils_struct_model.sh │ │ ├── run_sa_devils_struct_model1.sh │ │ ├── run_sa_devils_struct_model1_mating.sh │ │ ├── run_sa_devils_struct_model1_nonmating.sh │ │ └── run_sa_devils_thesis_model.sh │ ├── README │ ├── SAOM │ │ ├── .gitignore │ │ ├── GeodesicDistribution.R │ │ ├── README │ │ ├── load_data.R │ │ ├── runDevilSienaModel03.R │ │ ├── runDevilSienaModel04.R │ │ ├── runDevilSienaModel09.R │ │ ├── runDevilSienaModel10.R │ │ ├── runDevilSienaModel11.R │ │ ├── runDevilSienaModel12.R │ │ └── runDevilSienaModel13.R │ └── tergm_replication │ │ ├── .gitignore │ │ ├── DFTDstatus.csv │ │ ├── Dryad Data -- Data for Infectious disease and sickness behaviour tumour progression affects interaction patterns and social network structure in wild Tasmanian devils.pdf │ │ ├── README │ │ ├── README_data.txt │ │ ├── Season.csv │ │ ├── SexTERGM.csv │ │ ├── TERGM_code.R │ │ ├── TERGM_code.txt.ORIG │ │ ├── TumourLoad_factor.csv │ │ ├── Wounds.csv │ │ ├── f1.csv │ │ ├── f10.csv │ │ ├── f11.csv │ │ ├── f12.csv │ │ ├── f2.csv │ │ ├── f3.csv │ │ ├── f4.csv │ │ ├── f5.csv │ │ ├── f6.csv │ │ ├── f7.csv │ │ ├── f8.csv │ │ ├── f9.csv │ │ └── run_TERGM_code.sh │ ├── badgers │ ├── .gitignore │ ├── data │ │ ├── README │ │ ├── badgers_TBpos.txt │ │ ├── badgers_binattr.txt │ │ ├── badgers_catattr.txt │ │ ├── badgers_contattr.txt │ │ ├── badgers_overallnetwork.net │ │ ├── convertBadgerDataToALAAMEEFormat.R │ │ └── mee312770-sup-0001-supinfo.zip │ ├── runALAAMSAbadgers.py │ ├── runALAAMSAbadgersDistance.py │ ├── runALAAMSAbadgersMore.py │ ├── runALAAMSAbadgersNoEigenvector.py │ ├── runALAAMSAbadgersSimpleModel.py │ ├── run_sa_badgers.sh │ ├── run_sa_badgers_distance.sh │ ├── run_sa_badgers_more.sh │ ├── run_sa_badgers_no_eigenvector.sh │ └── run_sa_badgers_simple_model.sh │ ├── bipartite │ ├── Seierstad_director_interlocks │ │ ├── README │ │ ├── convertNorwegianDirectorInterlockDataToALAAMEEFormat.R │ │ ├── convertNorwegianDirectorInterlockDataToALAAMEEFormat.out │ │ ├── data │ │ │ ├── Boards and Gender.pdf │ │ │ ├── README.txt │ │ │ ├── data_companies.txt │ │ │ ├── data_people.txt │ │ │ ├── net1m_2002-05-01.txt │ │ │ ├── net1m_2002-06-01.txt │ │ │ ├── net1m_2002-07-01.txt │ │ │ ├── net1m_2002-08-01.txt │ │ │ ├── net1m_2002-09-01.txt │ │ │ ├── net1m_2002-10-01.txt │ │ │ ├── net1m_2002-11-01.txt │ │ │ ├── net1m_2002-12-01.txt │ │ │ ├── net1m_2003-01-01.txt │ │ │ ├── net1m_2003-02-01.txt │ │ │ ├── net1m_2003-03-01.txt │ │ │ ├── net1m_2003-04-01.txt │ │ │ ├── net1m_2003-05-01.txt │ │ │ ├── net1m_2003-06-01.txt │ │ │ ├── net1m_2003-07-01.txt │ │ │ ├── net1m_2003-08-01.txt │ │ │ ├── net1m_2003-09-01.txt │ │ │ ├── net1m_2003-10-01.txt │ │ │ ├── net1m_2003-11-01.txt │ │ │ ├── net1m_2003-12-01.txt │ │ │ ├── net1m_2004-01-01.txt │ │ │ ├── net1m_2004-02-01.txt │ │ │ ├── net1m_2004-03-01.txt │ │ │ ├── net1m_2004-04-01.txt │ │ │ ├── net1m_2004-05-01.txt │ │ │ ├── net1m_2004-06-01.txt │ │ │ ├── net1m_2004-07-01.txt │ │ │ ├── net1m_2004-08-01.txt │ │ │ ├── net1m_2004-09-01.txt │ │ │ ├── net1m_2004-10-01.txt │ │ │ ├── net1m_2004-11-01.txt │ │ │ ├── net1m_2004-12-01.txt │ │ │ ├── net1m_2005-01-01.txt │ │ │ ├── net1m_2005-02-01.txt │ │ │ ├── net1m_2005-03-01.txt │ │ │ ├── net1m_2005-04-01.txt │ │ │ ├── net1m_2005-05-01.txt │ │ │ ├── net1m_2005-06-01.txt │ │ │ ├── net1m_2005-07-01.txt │ │ │ ├── net1m_2005-08-01.txt │ │ │ ├── net1m_2005-09-01.txt │ │ │ ├── net1m_2005-10-01.txt │ │ │ ├── net1m_2005-11-01.txt │ │ │ ├── net1m_2005-12-01.txt │ │ │ ├── net1m_2006-01-01.txt │ │ │ ├── net1m_2006-02-01.txt │ │ │ ├── net1m_2006-03-01.txt │ │ │ ├── net1m_2006-04-01.txt │ │ │ ├── net1m_2006-05-01.txt │ │ │ ├── net1m_2006-06-01.txt │ │ │ ├── net1m_2006-07-01.txt │ │ │ ├── net1m_2006-08-01.txt │ │ │ ├── net1m_2006-09-01.txt │ │ │ ├── net1m_2006-10-01.txt │ │ │ ├── net1m_2006-11-01.txt │ │ │ ├── net1m_2006-12-01.txt │ │ │ ├── net1m_2007-01-01.txt │ │ │ ├── net1m_2007-02-01.txt │ │ │ ├── net1m_2007-03-01.txt │ │ │ ├── net1m_2007-04-01.txt │ │ │ ├── net1m_2007-05-01.txt │ │ │ ├── net1m_2007-06-01.txt │ │ │ ├── net1m_2007-07-01.txt │ │ │ ├── net1m_2007-08-01.txt │ │ │ ├── net1m_2007-09-01.txt │ │ │ ├── net1m_2007-10-01.txt │ │ │ ├── net1m_2007-11-01.txt │ │ │ ├── net1m_2007-12-01.txt │ │ │ ├── net1m_2008-01-01.txt │ │ │ ├── net1m_2008-02-01.txt │ │ │ ├── net1m_2008-03-01.txt │ │ │ ├── net1m_2008-04-01.txt │ │ │ ├── net1m_2008-05-01.txt │ │ │ ├── net1m_2008-06-01.txt │ │ │ ├── net1m_2008-07-01.txt │ │ │ ├── net1m_2008-08-01.txt │ │ │ ├── net1m_2008-09-01.txt │ │ │ ├── net1m_2008-10-01.txt │ │ │ ├── net1m_2008-11-01.txt │ │ │ ├── net1m_2008-12-01.txt │ │ │ ├── net1m_2009-01-01.txt │ │ │ ├── net1m_2009-02-01.txt │ │ │ ├── net1m_2009-03-01.txt │ │ │ ├── net1m_2009-04-01.txt │ │ │ ├── net1m_2009-05-01.txt │ │ │ ├── net1m_2009-06-01.txt │ │ │ ├── net1m_2009-07-01.txt │ │ │ ├── net1m_2009-08-01.txt │ │ │ ├── net1m_2009-09-01.txt │ │ │ ├── net1m_2009-10-01.txt │ │ │ ├── net1m_2009-11-01.txt │ │ │ ├── net1m_2009-12-01.txt │ │ │ ├── net1m_2010-01-01.txt │ │ │ ├── net1m_2010-02-01.txt │ │ │ ├── net1m_2010-03-01.txt │ │ │ ├── net1m_2010-04-01.txt │ │ │ ├── net1m_2010-05-01.txt │ │ │ ├── net1m_2010-06-01.txt │ │ │ ├── net1m_2010-07-01.txt │ │ │ ├── net1m_2010-08-01.txt │ │ │ ├── net1m_2010-09-01.txt │ │ │ ├── net1m_2010-10-01.txt │ │ │ ├── net1m_2010-11-01.txt │ │ │ ├── net1m_2010-12-01.txt │ │ │ ├── net1m_2011-01-01.txt │ │ │ ├── net1m_2011-02-01.txt │ │ │ ├── net1m_2011-03-01.txt │ │ │ ├── net1m_2011-04-01.txt │ │ │ ├── net1m_2011-05-01.txt │ │ │ ├── net1m_2011-06-01.txt │ │ │ ├── net1m_2011-07-01.txt │ │ │ ├── net1m_2011-08-01.txt │ │ │ ├── net2m_2002-05-01.txt │ │ │ ├── net2m_2002-06-01.txt │ │ │ ├── net2m_2002-07-01.txt │ │ │ ├── net2m_2002-08-01.txt │ │ │ ├── net2m_2002-09-01.txt │ │ │ ├── net2m_2002-10-01.txt │ │ │ ├── net2m_2002-11-01.txt │ │ │ ├── net2m_2002-12-01.txt │ │ │ ├── net2m_2003-01-01.txt │ │ │ ├── net2m_2003-02-01.txt │ │ │ ├── net2m_2003-03-01.txt │ │ │ ├── net2m_2003-04-01.txt │ │ │ ├── net2m_2003-05-01.txt │ │ │ ├── net2m_2003-06-01.txt │ │ │ ├── net2m_2003-07-01.txt │ │ │ ├── net2m_2003-08-01.txt │ │ │ ├── net2m_2003-09-01.txt │ │ │ ├── net2m_2003-10-01.txt │ │ │ ├── net2m_2003-11-01.txt │ │ │ ├── net2m_2003-12-01.txt │ │ │ ├── net2m_2004-01-01.txt │ │ │ ├── net2m_2004-02-01.txt │ │ │ ├── net2m_2004-03-01.txt │ │ │ ├── net2m_2004-04-01.txt │ │ │ ├── net2m_2004-05-01.txt │ │ │ ├── net2m_2004-06-01.txt │ │ │ ├── net2m_2004-07-01.txt │ │ │ ├── net2m_2004-08-01.txt │ │ │ ├── net2m_2004-09-01.txt │ │ │ ├── net2m_2004-10-01.txt │ │ │ ├── net2m_2004-11-01.txt │ │ │ ├── net2m_2004-12-01.txt │ │ │ ├── net2m_2005-01-01.txt │ │ │ ├── net2m_2005-02-01.txt │ │ │ ├── net2m_2005-03-01.txt │ │ │ ├── net2m_2005-04-01.txt │ │ │ ├── net2m_2005-05-01.txt │ │ │ ├── net2m_2005-06-01.txt │ │ │ ├── net2m_2005-07-01.txt │ │ │ ├── net2m_2005-08-01.txt │ │ │ ├── net2m_2005-09-01.txt │ │ │ ├── net2m_2005-10-01.txt │ │ │ ├── net2m_2005-11-01.txt │ │ │ ├── net2m_2005-12-01.txt │ │ │ ├── net2m_2006-01-01.txt │ │ │ ├── net2m_2006-02-01.txt │ │ │ ├── net2m_2006-03-01.txt │ │ │ ├── net2m_2006-04-01.txt │ │ │ ├── net2m_2006-05-01.txt │ │ │ ├── net2m_2006-06-01.txt │ │ │ ├── net2m_2006-07-01.txt │ │ │ ├── net2m_2006-08-01.txt │ │ │ ├── net2m_2006-09-01.txt │ │ │ ├── net2m_2006-10-01.txt │ │ │ ├── net2m_2006-11-01.txt │ │ │ ├── net2m_2006-12-01.txt │ │ │ ├── net2m_2007-01-01.txt │ │ │ ├── net2m_2007-02-01.txt │ │ │ ├── net2m_2007-03-01.txt │ │ │ ├── net2m_2007-04-01.txt │ │ │ ├── net2m_2007-05-01.txt │ │ │ ├── net2m_2007-06-01.txt │ │ │ ├── net2m_2007-07-01.txt │ │ │ ├── net2m_2007-08-01.txt │ │ │ ├── net2m_2007-09-01.txt │ │ │ ├── net2m_2007-10-01.txt │ │ │ ├── net2m_2007-11-01.txt │ │ │ ├── net2m_2007-12-01.txt │ │ │ ├── net2m_2008-01-01.txt │ │ │ ├── net2m_2008-02-01.txt │ │ │ ├── net2m_2008-03-01.txt │ │ │ ├── net2m_2008-04-01.txt │ │ │ ├── net2m_2008-05-01.txt │ │ │ ├── net2m_2008-06-01.txt │ │ │ ├── net2m_2008-07-01.txt │ │ │ ├── net2m_2008-08-01.txt │ │ │ ├── net2m_2008-09-01.txt │ │ │ ├── net2m_2008-10-01.txt │ │ │ ├── net2m_2008-11-01.txt │ │ │ ├── net2m_2008-12-01.txt │ │ │ ├── net2m_2009-01-01.txt │ │ │ ├── net2m_2009-02-01.txt │ │ │ ├── net2m_2009-03-01.txt │ │ │ ├── net2m_2009-04-01.txt │ │ │ ├── net2m_2009-05-01.txt │ │ │ ├── net2m_2009-06-01.txt │ │ │ ├── net2m_2009-07-01.txt │ │ │ ├── net2m_2009-08-01.txt │ │ │ ├── net2m_2009-09-01.txt │ │ │ ├── net2m_2009-10-01.txt │ │ │ ├── net2m_2009-11-01.txt │ │ │ ├── net2m_2009-12-01.txt │ │ │ ├── net2m_2010-01-01.txt │ │ │ ├── net2m_2010-02-01.txt │ │ │ ├── net2m_2010-03-01.txt │ │ │ ├── net2m_2010-04-01.txt │ │ │ ├── net2m_2010-05-01.txt │ │ │ ├── net2m_2010-06-01.txt │ │ │ ├── net2m_2010-07-01.txt │ │ │ ├── net2m_2010-08-01.txt │ │ │ ├── net2m_2010-09-01.txt │ │ │ ├── net2m_2010-10-01.txt │ │ │ ├── net2m_2010-11-01.txt │ │ │ ├── net2m_2010-12-01.txt │ │ │ ├── net2m_2011-01-01.txt │ │ │ ├── net2m_2011-02-01.txt │ │ │ ├── net2m_2011-03-01.txt │ │ │ ├── net2m_2011-04-01.txt │ │ │ ├── net2m_2011-05-01.txt │ │ │ ├── net2m_2011-06-01.txt │ │ │ ├── net2m_2011-07-01.txt │ │ │ ├── net2m_2011-08-01.txt │ │ │ └── view-source_www.boardsandgender.com_data.php.html │ │ ├── get_seierstad_data.sh │ │ ├── gof_stats.py │ │ ├── model_betweenness.py │ │ ├── model_birank.py │ │ ├── model_gwactivity.py │ │ ├── model_harmonic.py │ │ ├── model_nostruct.py │ │ ├── model_struct.py │ │ ├── norwegian_director_interlock_20090801_binattr.txt │ │ ├── norwegian_director_interlock_20090801_bipartite.net │ │ ├── norwegian_director_interlock_20090801_catattr.txt │ │ ├── norwegian_director_interlock_20090801_catattr_strings.txt │ │ ├── norwegian_director_interlock_20090801_contattr.txt │ │ ├── norwegian_director_interlock_20090801_outcome.txt │ │ ├── runALAAMSASeierstad_betweenness.py │ │ ├── runALAAMSASeierstad_birank.py │ │ ├── runALAAMSASeierstad_gwactivity.py │ │ ├── runALAAMSASeierstad_harmonic.py │ │ ├── runALAAMSASeierstad_nostruct.py │ │ ├── runALAAMSASeierstad_struct.py │ │ ├── run_seierstad_sa_betweenness_slurm_script.sh │ │ ├── run_seierstad_sa_birank_slurm_script.sh │ │ ├── run_seierstad_sa_gwactivity_slurm_script.sh │ │ ├── run_seierstad_sa_harmonic_slurm_script.sh │ │ ├── run_seierstad_sa_nostruct_slurm_script.sh │ │ └── run_seierstad_sa_struct_slurm_script.sh │ └── StLouisCrime │ │ ├── .gitignore │ │ ├── README │ │ ├── computeALAAMstatisticsStLouisCrime.py │ │ ├── convertStLouisCrimeDataToALAAMEEFormat.R │ │ ├── convertStLouisCrimeDataToALAAMEEFormat.out │ │ ├── crime_binattr.txt │ │ ├── crime_bipartite.net │ │ ├── crime_catattr.txt │ │ ├── crime_contattr.txt │ │ ├── crime_outcome.txt │ │ ├── gof_stats.py │ │ ├── model.py │ │ ├── model_betweenness.py │ │ ├── model_gwactivity.py │ │ ├── model_harmonic.py │ │ ├── model_nostruct.py │ │ ├── runALAAMEEStLouisCrimeParallel.py │ │ ├── runALAAMSAStLouisCrime.py │ │ ├── runALAAMSAStLouisCrime_betweenness.py │ │ ├── runALAAMSAStLouisCrime_gwactivity.py │ │ ├── runALAAMSAStLouisCrime_harmonic.py │ │ ├── runALAAMSAStLouisCrime_nostruct.py │ │ ├── runALAAMsimulateGoFStLouisCrime.py │ │ ├── run_StLouisCrime_R_scripts_slurm_script.sh │ │ ├── run_StLouisCrime_betweenness_sa_slurm_script.sh │ │ ├── run_StLouisCrime_gwactivity_sa_slurm_script.sh │ │ ├── run_StLouisCrime_harmonic_sa_slurm_script.sh │ │ ├── run_StLouisCrime_jobarray_slurm_script.sh │ │ ├── run_StLouisCrime_nostruct_sa_slurm_script.sh │ │ ├── run_StLouisCrime_parallel_slurm_script.sh │ │ ├── run_StLouisCrime_sa_slurm_script.sh │ │ ├── run_simulate_gof_StLouisCrime_slurm_script.sh │ │ └── run_submit_StLouisCrime_process_jobarray_slurm_script.sh │ ├── directed │ ├── .gitignore │ ├── HighSchoolFriendship │ │ ├── .gitignore │ │ ├── README │ │ ├── computeALAAMstatisticsHighschool.py │ │ ├── gof_stats.py │ │ ├── runALAAMSAhighschool_class.py │ │ ├── runALAAMSAhighschool_class_gw.py │ │ ├── runALAAMSAhighschool_class_gw_more.py │ │ ├── runALAAMSAhighschool_class_more.py │ │ ├── runALAAMSAhighschool_class_stars.py │ │ ├── runALAAMSAhighschool_class_stars2.py │ │ ├── runALAAMSAhighschool_gender.py │ │ ├── runALAAMSAhighschool_gender_gw.py │ │ ├── runALAAMSAhighschool_gender_gw_baseline.py │ │ ├── runALAAMSAhighschool_gender_gw_more.py │ │ ├── runALAAMSAhighschool_gender_logcontagion.py │ │ ├── runALAAMSAhighschool_gender_logcontagion_more.py │ │ ├── runALAAMSAhighschool_gender_more.py │ │ ├── runALAAMSAhighschool_gender_more_igraph.py │ │ ├── runALAAMSAhighschool_gender_powercontagion.py │ │ ├── runALAAMSAhighschool_gender_powercontagion_more.py │ │ ├── runALAAMSAhighschool_gender_stars.py │ │ ├── runALAAMSAhighschool_gender_stars2.py │ │ ├── runALAAMsimulateGoFHighschool.py │ │ ├── runALAAMsimulateGoFHighschoolModel6.py │ │ ├── run_sa_highschool_class_example.sh │ │ ├── run_sa_highschool_class_gw_example.sh │ │ ├── run_sa_highschool_class_gw_more_example.sh │ │ ├── run_sa_highschool_class_more_example.sh │ │ ├── run_sa_highschool_class_stars2_example.sh │ │ ├── run_sa_highschool_class_stars_example.sh │ │ ├── run_sa_highschool_gender_example.sh │ │ ├── run_sa_highschool_gender_gw_baseline.sh │ │ ├── run_sa_highschool_gender_gw_example.sh │ │ ├── run_sa_highschool_gender_gw_more_example.sh │ │ ├── run_sa_highschool_gender_logcontagion_example.sh │ │ ├── run_sa_highschool_gender_logcontagion_more_example.sh │ │ ├── run_sa_highschool_gender_more_example.sh │ │ ├── run_sa_highschool_gender_more_igraph_example.sh │ │ ├── run_sa_highschool_gender_powercontagion_example.sh │ │ ├── run_sa_highschool_gender_powercontagion_more_example.sh │ │ ├── run_sa_highschool_gender_stars2_example.sh │ │ ├── run_sa_highschool_gender_stars_example.sh │ │ ├── run_simulate_gof_highschool_model6_slurm_script.sh │ │ └── run_simulate_gof_highschool_slurm_script.sh │ ├── glasgow_s50 │ │ ├── .gitignore │ │ ├── README │ │ ├── downloadAndConvertSIENAs50DataToALAAMEEformat.R │ │ ├── gof_stats.py │ │ ├── runALAAMSAs50.py │ │ ├── runALAAMSAs50GW.py │ │ ├── runALAAMSAs50simpleModel.py │ │ ├── runALAAMSAs50simpleModelGW.py │ │ ├── run_sa_s50_example.sh │ │ ├── run_sa_s50_example_gw.sh │ │ ├── run_sa_s50_example_simple_model.sh │ │ ├── run_sa_s50_example_simple_model_gw.sh │ │ ├── s50-binattr.txt │ │ ├── s50-catattr.txt │ │ ├── s50-contattr.txt │ │ ├── s50-friendships-adjmatrix.txt │ │ ├── s50-friendships-directed.net │ │ ├── s50-outcome.txt │ │ └── s50.pnet │ └── run_simple_sa_directed_example.sh │ ├── run_karateclub_example.sh │ ├── run_karateclub_sa_example.sh │ ├── run_karateclub_sa_example_slurm_script.sh │ ├── run_sa_bipartite_example.sh │ ├── run_simple_example.sh │ ├── run_simple_example_zoo_sampler.sh │ ├── run_simple_sa_N1000_example.sh │ ├── run_simple_sa_example.sh │ ├── run_simple_sa_example_ozstar_slurm_script.sh │ ├── run_simple_sa_example_zoo_sampler.sh │ ├── run_simulate_example.sh │ ├── run_simulate_example_zoo_sampler.sh │ └── run_simulate_gof_example.sh ├── python ├── .gitignore ├── BipartiteGraph.py ├── Digraph.py ├── Graph.py ├── README ├── SparseMatrix.py ├── basicALAAMsampler.py ├── bipartiteALAAMsampler.py ├── changeStatisticsALAAM.py ├── changeStatisticsALAAMbipartite.py ├── changeStatisticsALAAMdirected.py ├── computeALAAMstatisticsSimpleDemo.py ├── computeObservedStatistics.py ├── conditionalALAAMsampler.py ├── equilibriumExpectation.py ├── equilibriumExpectationBorisenko.py ├── estimateALAAMEE.py ├── estimateALAAMSA.py ├── gofALAAM.py ├── igraphConvert.py ├── initialEstimator.py ├── parseEstimationEEOutput.py ├── runALAAMEEBipartiteDemoParallel.py ├── runALAAMEESimpleDemo.py ├── runALAAMEESimpleDemoN1000Parallel.py ├── runALAAMEESimpleDemoParallel.py ├── runALAAMEESimpleDemoParallelDirected.py ├── runALAAMEESimpleDemoSnowball.py ├── runALAAMEESimpleDemoSnowballParallel.py ├── runALAAMEESimpleDemoZooSampler.py ├── runALAAMEEkarateClub.py ├── runALAAMEEkarateClubParallel.py ├── runALAAMSABipartiteSimpleDemo.py ├── runALAAMSASimpleDemo.py ├── runALAAMSASimpleDemoDirected.py ├── runALAAMSASimpleDemoN1000.py ├── runALAAMSASimpleDemoSnowball.py ├── runALAAMSASimpleDemoZooSampler.py ├── runALAAMSAkarateClub.py ├── runALAAMsimulateSimpleDemo.py ├── runALAAMsimulateSimpleDemoZooSampler.py ├── simulateALAAM.py ├── simulateALAAMsimpleDemo.py ├── stochasticApproximation.py ├── utils.py └── zooALAAMsampler.py ├── releasenotes.txt ├── scripts ├── EEEstimation2textableMultiModels.sh ├── EEEstimation2textableSingleModel.sh ├── build_alaamee_estimation_fixed_total_runs_results_tab.sh ├── build_alaamee_estimation_results_tab.sh ├── build_alaamee_estimation_var_total_runs_results_tab.sh ├── build_alaamee_estimation_var_total_runs_results_tab_faster.sh ├── build_estimation_dir.sh ├── formatestimatorresultstabletex.sh ├── formatestimatorresultstabletexFalseNegatives.sh ├── formatestimatorresultstabletexFalsePositives.sh ├── getbashtimes.sh ├── reorderAlaamTextable.sh ├── stochasticApproxEstimation2textableMultiModels.sh ├── stochasticApproxEstimation2textableSingleModel.sh ├── stochasticApproxGoF2textableMultiModels.sh ├── templates │ ├── runALAAMEEproject90simulatedParallel.py.template │ ├── run_project90sim_R_scripts_slurm_script.sh.template │ ├── run_project90simulated_parallel_slurm_script.sh.template │ ├── run_project90simulated_parallel_slurm_script.sh.template.moreruns │ └── run_submit_project90simulated_parallel_slurm_script.sh.template └── update_estimation_dir_more_runs.sh ├── simulations ├── AlaamSimulations │ ├── GitHubSimulations │ │ ├── Activity │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateGitHub.py │ │ │ └── run_simulate_gihub_job_array_slurm_script.sh │ │ ├── Contagion │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateGitHub.py │ │ │ └── run_simulate_gihub_job_array_slurm_script.sh │ │ ├── data │ │ │ ├── .gitignore │ │ │ └── get_github_data_slurm_script.sh │ │ └── observed │ │ │ ├── computeALAAMstatisticsGitHub.py │ │ │ └── run_compute_obs_stats_github_slurm_script.sh │ ├── HighSchoolFriendship │ │ ├── Receiver │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateHighSchool.py │ │ │ └── run_simulate_highschool_job_array_slurm_script.sh │ │ ├── Sender │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateHighSchool.py │ │ │ └── run_simulate_highschool_job_array_slurm_script.sh │ │ ├── data │ │ │ ├── convert_highschoolfriendship_directed_network_to_pajek_ALAAMEE_format.R │ │ │ ├── get_adjacency_matrix.R │ │ │ └── load_highschoolfriendship_directed_network.R │ │ └── observed │ │ │ ├── computeALAAMstatisticsHighSchool.py │ │ │ └── run_compute_obs_stats_highschool_slurm_script.sh │ ├── deezerEuropeSimulations │ │ ├── Activity │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateDeezer.py │ │ │ └── run_simulate_deezer_job_array_slurm_script.sh │ │ ├── Contagion │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateDeezer.py │ │ │ └── run_simulate_deezer_job_array_slurm_script.sh │ │ ├── TwoStar │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateDeezer.py │ │ │ └── run_simulate_deezer_job_array_slurm_script.sh │ │ ├── data │ │ │ └── get_deezer_data_slurm_script.sh │ │ └── observed │ │ │ ├── computeALAAMstatisticsDeezer.py │ │ │ └── run_compute_obs_stats_deezer_slurm_script.sh │ ├── geometrically_weighted │ │ ├── GitHubSimulations │ │ │ ├── Contagion_gwparams │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateGitHub.py │ │ │ │ └── run_simulate_github_job_array_slurm_script.sh │ │ │ ├── GWActivity │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateGitHub.py │ │ │ │ └── run_simulate_github_job_array_slurm_script.sh │ │ │ ├── GWActivity_gwparams │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateGitHub.py │ │ │ │ └── run_simulate_github_job_array_slurm_script.sh │ │ │ ├── GWContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateGitHub.py │ │ │ │ └── run_simulate_github_job_array_slurm_script.sh │ │ │ ├── GWContagion_gwparams │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateGitHub.py │ │ │ │ └── run_simulate_github_job_array_slurm_script.sh │ │ │ ├── LogContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateGitHub.py │ │ │ │ └── run_simulate_github_job_array_slurm_script.sh │ │ │ ├── LogContagion_gwparams │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateGitHub.py │ │ │ │ └── run_simulate_github_job_array_slurm_script.sh │ │ │ └── observed │ │ │ │ ├── computeALAAMstatisticsGitHub.py │ │ │ │ └── run_compute_obs_stats_github_slurm_script.sh │ │ ├── HighSchoolFriendship │ │ │ ├── GWContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateHighSchool.py │ │ │ │ └── run_simulate_highschool_job_array_slurm_script.sh │ │ │ ├── GWReceiver │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateHighSchool.py │ │ │ │ └── run_simulate_highschool_job_array_slurm_script.sh │ │ │ ├── GWSender │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateHighSchool.py │ │ │ │ └── run_simulate_highschool_job_array_slurm_script.sh │ │ │ ├── LogContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateHighSchool.py │ │ │ │ └── run_simulate_highschool_job_array_slurm_script.sh │ │ │ └── observed │ │ │ │ ├── computeALAAMstatisticsHighSchool.py │ │ │ │ └── run_compute_obs_stats_highschool_slurm_script.sh │ │ ├── deezerEuropeSimulations │ │ │ ├── GWActivity │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateDeezer.py │ │ │ │ └── run_simulate_deezer_job_array_slurm_script.sh │ │ │ ├── GWContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateDeezer.py │ │ │ │ └── run_simulate_deezer_job_array_slurm_script.sh │ │ │ ├── LogContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateDeezer.py │ │ │ │ └── run_simulate_deezer_job_array_slurm_script.sh │ │ │ └── observed │ │ │ │ ├── computeALAAMstatisticsDeezer.py │ │ │ │ └── run_compute_obs_stats_deezer_slurm_script.sh │ │ ├── higgsTwitterSimulations │ │ │ ├── GWContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateHiggs.py │ │ │ │ └── run_simulate_higgs_job_array_slurm_script.sh │ │ │ ├── GWReceiver │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateHiggs.py │ │ │ │ └── run_simulate_higgs_job_array_slurm_script.sh │ │ │ ├── GWSender │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateHiggs.py │ │ │ │ └── run_simulate_higgs_job_array_slurm_script.sh │ │ │ ├── LogContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateHiggs.py │ │ │ │ └── run_simulate_higgs_job_array_slurm_script.sh │ │ │ └── observed │ │ │ │ ├── computeALAAMstatisticsHiggsOutcomeReply.py │ │ │ │ └── run_compute_obs_stats_higgs_outcome_reply_slurm_script.sh │ │ ├── latticeSimulations │ │ │ ├── GWActivity │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateLattice.py │ │ │ │ └── run_simulate_lattice_job_array_slurm_script.sh │ │ │ ├── GWContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateLattice.py │ │ │ │ └── run_simulate_lattice_job_array_slurm_script.sh │ │ │ └── LogContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateLattice.py │ │ │ │ └── run_simulate_lattice_job_array_slurm_script.sh │ │ ├── pokec │ │ │ ├── Contagion_gwparams │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulatePokec.py │ │ │ │ └── run_simulate_pokec_job_array_slurm_script.sh │ │ │ ├── GWActivity │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulatePokec.py │ │ │ │ └── run_simulate_pokec_job_array_slurm_script.sh │ │ │ ├── GWActivity_gwparams │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulatePokec.py │ │ │ │ └── run_simulate_pokec_job_array_slurm_script.sh │ │ │ ├── GWContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulatePokec.py │ │ │ │ └── run_simulate_pokec_job_array_slurm_script.sh │ │ │ ├── LogContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulatePokec.py │ │ │ │ └── run_simulate_pokec_job_array_slurm_script.sh │ │ │ └── observed │ │ │ │ ├── computeALAAMstatisticsPokec.py │ │ │ │ └── run_compute_obs_stats_pokec_slurm_script.sh │ │ ├── project90Simulations │ │ │ ├── LogContagion │ │ │ │ ├── collect_results.sh │ │ │ │ ├── runALAAMsimulateProject90.py │ │ │ │ └── run_simulate_project90_job_array_slurm_script.sh │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateProject90.py │ │ │ └── run_simulate_project90_job_array_slurm_script.sh │ │ └── project90noAttrSimulations │ │ │ └── GWActivity │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateProject90.py │ │ │ └── run_simulate_project90_job_array_slurm_script.sh │ ├── higgsTwitterSimulations │ │ ├── Contagion │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateHiggs.py │ │ │ └── run_simulate_higgs_job_array_slurm_script.sh │ │ ├── README │ │ ├── Receiver │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateHiggs.py │ │ │ └── run_simulate_higgs_job_array_slurm_script.sh │ │ ├── Sender │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateHiggs.py │ │ │ └── run_simulate_higgs_job_array_slurm_script.sh │ │ ├── data │ │ │ ├── README │ │ │ └── get_higgs_twitter_data_slurm_script.sh │ │ └── observed │ │ │ ├── computeALAAMstatisticsHiggsOutcomeReply.py │ │ │ └── run_compute_obs_stats_higgs_outcome_reply_slurm_script.sh │ ├── latticeSimulations │ │ ├── Activity │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateLattice.py │ │ │ └── run_simulate_lattice_job_array_slurm_script.sh │ │ ├── Contagion │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulateLattice.py │ │ │ └── run_simulate_lattice_job_array_slurm_script.sh │ │ └── data │ │ │ └── make_lattice.R │ ├── pokec │ │ ├── Activity │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulatePokec.py │ │ │ └── run_simulate_pokec_job_array_slurm_script.sh │ │ ├── Contagion │ │ │ ├── collect_results.sh │ │ │ ├── runALAAMsimulatePokec.py │ │ │ └── run_simulate_pokec_job_array_slurm_script.sh │ │ ├── data │ │ │ ├── READFME │ │ │ └── get_pokec_data.sh │ │ └── observed │ │ │ ├── computeALAAMstatisticsPokec.py │ │ │ └── run_compute_obs_stats_pokec_slurm_script.sh │ ├── project90Simulations │ │ ├── README │ │ ├── collect_results.sh │ │ ├── data │ │ │ └── README │ │ ├── runALAAMsimulateProject90.py │ │ └── run_simulate_project90_job_array_slurm_script.sh │ └── project90noAttrSimulations │ │ ├── Activity │ │ ├── collect_results.sh │ │ ├── runALAAMsimulateProject90.py │ │ └── run_simulate_project90_job_array_slurm_script.sh │ │ ├── Contagion │ │ ├── collect_results.sh │ │ ├── runALAAMsimulateProject90.py │ │ └── run_simulate_project90_job_array_slurm_script.sh │ │ └── TwoStar │ │ ├── collect_results.sh │ │ ├── runALAAMsimulateProject90.py │ │ └── run_simulate_project90_job_array_slurm_script.sh ├── README └── results │ ├── plotAlaamPhaseTransitions.R │ ├── plotAlaamPhaseTransitionsGW.R │ └── plot_mean_and_variance.R └── tests ├── bipartitematrix.py ├── run_tests.sh ├── s50_sim.txt ├── tests.py └── tests_igraph.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/.gitignore -------------------------------------------------------------------------------- /CITATION.cff: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/CITATION.cff -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/LICENSE -------------------------------------------------------------------------------- /R/.gitignore: -------------------------------------------------------------------------------- 1 | *.R~ 2 | -------------------------------------------------------------------------------- /R/EIindex.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/EIindex.R -------------------------------------------------------------------------------- /R/computeALAMEEcovariance.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/computeALAMEEcovariance.R -------------------------------------------------------------------------------- /R/computeALAMEEcovariance_var_total_runs_faster.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/computeALAMEEcovariance_var_total_runs_faster.R -------------------------------------------------------------------------------- /R/convertAsikainenLastfmToALAAMEEFormat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertAsikainenLastfmToALAAMEEFormat.R -------------------------------------------------------------------------------- /R/convertConnect4BoardDirectorAffiliationsToALAAMEEFormatCentrality.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertConnect4BoardDirectorAffiliationsToALAAMEEFormatCentrality.R -------------------------------------------------------------------------------- /R/convertEvtushenkoBoardDirectorAffiliationsToALAAMEEFormatCentrality.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertEvtushenkoBoardDirectorAffiliationsToALAAMEEFormatCentrality.R -------------------------------------------------------------------------------- /R/convertMatrixToArclist.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertMatrixToArclist.R -------------------------------------------------------------------------------- /R/convertMatrixToEdgelist.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertMatrixToEdgelist.R -------------------------------------------------------------------------------- /R/convertProject90giantComponentToPajekEdgelist.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertProject90giantComponentToPajekEdgelist.R -------------------------------------------------------------------------------- /R/convertSNAPGemsecDeezerToEEformat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertSNAPGemsecDeezerToEEformat.R -------------------------------------------------------------------------------- /R/convertSNAPdeezerToEEformat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertSNAPdeezerToEEformat.R -------------------------------------------------------------------------------- /R/convertSNAPgithubToEEformat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertSNAPgithubToEEformat.R -------------------------------------------------------------------------------- /R/convertSNAPhiggsTwitterToALAAMEEFormat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertSNAPhiggsTwitterToALAAMEEFormat.R -------------------------------------------------------------------------------- /R/convertSNAPpokecToALAAMEEFormat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/convertSNAPpokecToALAAMEEFormat.R -------------------------------------------------------------------------------- /R/makeMLEresultstable.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/makeMLEresultstable.R -------------------------------------------------------------------------------- /R/makeMLEresultstableFalsePositives.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/makeMLEresultstableFalsePositives.R -------------------------------------------------------------------------------- /R/makeMLEresultstableFalsePositivesVarTotalRuns.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/makeMLEresultstableFalsePositivesVarTotalRuns.R -------------------------------------------------------------------------------- /R/makeMLEresultstableVarTotalRuns.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/makeMLEresultstableVarTotalRuns.R -------------------------------------------------------------------------------- /R/plotALAAMEEResults.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/plotALAAMEEResults.R -------------------------------------------------------------------------------- /R/plotALAAMEESimpleDemoResults.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/plotALAAMEESimpleDemoResults.R -------------------------------------------------------------------------------- /R/plotALAAMEEsimFit.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/plotALAAMEEsimFit.R -------------------------------------------------------------------------------- /R/plotALAAMEEvsRandomDegreeDist.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/plotALAAMEEvsRandomDegreeDist.R -------------------------------------------------------------------------------- /R/plotMLEresults.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/plotMLEresults.R -------------------------------------------------------------------------------- /R/plotMLEresultsFalsePositivesVarTotalRuns.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/plotMLEresultsFalsePositivesVarTotalRuns.R -------------------------------------------------------------------------------- /R/plotMLEresultsVarTotalRuns.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/plotMLEresultsVarTotalRuns.R -------------------------------------------------------------------------------- /R/plotSimulationDiagnostics.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/plotSimulationDiagnostics.R -------------------------------------------------------------------------------- /R/readFiles.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/readFiles.R -------------------------------------------------------------------------------- /R/readProject90Data.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/readProject90Data.R -------------------------------------------------------------------------------- /R/simFitPlots.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/simFitPlots.R -------------------------------------------------------------------------------- /R/snowballSample.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/snowballSample.R -------------------------------------------------------------------------------- /R/snowballSampleFromExampleData.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/R/snowballSampleFromExampleData.R -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/README.md -------------------------------------------------------------------------------- /examples/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/README -------------------------------------------------------------------------------- /examples/conditional/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/conditional/.gitignore -------------------------------------------------------------------------------- /examples/conditional/run_conditional_ee_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/conditional/run_conditional_ee_example.sh -------------------------------------------------------------------------------- /examples/conditional/run_conditional_ee_example_parallel.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/conditional/run_conditional_ee_example_parallel.sh -------------------------------------------------------------------------------- /examples/conditional/run_conditional_sa_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/conditional/run_conditional_sa_example.sh -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/.gitignore: -------------------------------------------------------------------------------- 1 | .RData 2 | .Rhistory 3 | -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/README.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/README.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/generateInouyePykeALAAMExample.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/generateInouyePykeALAAMExample.R -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/ino_matr_f.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/ino_matr_f.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye.pdf -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_1988.xls: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_1988.xls -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam.paj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam.paj -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet.clu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet.clu -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet.pnet: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet.pnet -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet_ALAAM.clu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet_ALAAM.clu -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet_ALAAM_est.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet_ALAAM_est.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet_model.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet_model.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet_update.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_alaam_mpnet_update.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_binattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_binattr.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_bipartite.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_bipartite.net -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_catattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_catattr.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_contattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_contattr.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_matrix.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_matrix.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_outcome.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_outcome.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_outcome_BNA.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/inouye_outcome_BNA.txt -------------------------------------------------------------------------------- /examples/data/bipartite/Inouye_Pyke_pollinator_web/testing.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/Inouye_Pyke_pollinator_web/testing.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/.gitignore: -------------------------------------------------------------------------------- 1 | .RData 2 | .Rhistory 3 | -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/generateTinyBipartiteExample.out: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/generateTinyBipartiteExample.out -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/generateTinyBipartiteExample.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/generateTinyBipartiteExample.py -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/testing.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/testing.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny.pdf -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_biadjacency_matrix.txt: -------------------------------------------------------------------------------- 1 | 1 1 2 | 1 0 3 | 1 1 4 | -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_binattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_binattr.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite.net -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam.clu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam.clu -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam.pnet: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam.pnet -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_ALAAM.clu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_ALAAM.clu -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_ALAAM_est.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_ALAAM_est.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_M_0.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_M_0.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_M_VPNet_Edges_0.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_M_VPNet_Edges_0.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_M_VPNet_Nodes_0.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_M_VPNet_Nodes_0.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_M_changestats.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_M_changestats.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_X_0.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_Network_X_0.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_model.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_model.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_update.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_bipartite_mpnet_alaam_update.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_catattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_catattr.txt -------------------------------------------------------------------------------- /examples/data/bipartite/tiny/tiny_outcome.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/bipartite/tiny/tiny_outcome.txt -------------------------------------------------------------------------------- /examples/data/directed/HighSchoolFriendship/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/directed/HighSchoolFriendship/.gitignore -------------------------------------------------------------------------------- /examples/data/directed/HighSchoolFriendship/Friendship-network_data_2013.csv.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/directed/HighSchoolFriendship/Friendship-network_data_2013.csv.gz -------------------------------------------------------------------------------- /examples/data/directed/HighSchoolFriendship/README.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/directed/HighSchoolFriendship/README.txt -------------------------------------------------------------------------------- /examples/data/directed/HighSchoolFriendship/get_adjacency_matrix.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/directed/HighSchoolFriendship/get_adjacency_matrix.R -------------------------------------------------------------------------------- /examples/data/directed/HighSchoolFriendship/highschool_friendship_arclist.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/directed/HighSchoolFriendship/highschool_friendship_arclist.net -------------------------------------------------------------------------------- /examples/data/directed/HighSchoolFriendship/highschool_friendship_binattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/directed/HighSchoolFriendship/highschool_friendship_binattr.txt -------------------------------------------------------------------------------- /examples/data/directed/HighSchoolFriendship/highschool_friendship_catattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/directed/HighSchoolFriendship/highschool_friendship_catattr.txt -------------------------------------------------------------------------------- /examples/data/directed/HighSchoolFriendship/highschool_friendship_class2BIO3.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/directed/HighSchoolFriendship/highschool_friendship_class2BIO3.txt -------------------------------------------------------------------------------- /examples/data/directed/HighSchoolFriendship/metadata_2013.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/directed/HighSchoolFriendship/metadata_2013.txt -------------------------------------------------------------------------------- /examples/data/karate_club/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/karate_club/README -------------------------------------------------------------------------------- /examples/data/karate_club/generateKarateClubExample.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/karate_club/generateKarateClubExample.R -------------------------------------------------------------------------------- /examples/data/karate_club/karate.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/karate_club/karate.net -------------------------------------------------------------------------------- /examples/data/karate_club/karate.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/karate_club/karate.pdf -------------------------------------------------------------------------------- /examples/data/karate_club/karate_binattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/karate_club/karate_binattr.txt -------------------------------------------------------------------------------- /examples/data/karate_club/karate_catattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/karate_club/karate_catattr.txt -------------------------------------------------------------------------------- /examples/data/karate_club/karate_contattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/karate_club/karate_contattr.txt -------------------------------------------------------------------------------- /examples/data/karate_club/karate_outcome.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/karate_club/karate_outcome.txt -------------------------------------------------------------------------------- /examples/data/simulated_n1000_bin_cont/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n1000_bin_cont/README -------------------------------------------------------------------------------- /examples/data/simulated_n1000_bin_cont/binaryAttribute_50_50_n1000.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n1000_bin_cont/binaryAttribute_50_50_n1000.txt -------------------------------------------------------------------------------- /examples/data/simulated_n1000_bin_cont/continuousAttributes_n1000.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n1000_bin_cont/continuousAttributes_n1000.txt -------------------------------------------------------------------------------- /examples/data/simulated_n1000_bin_cont/n1000_kstar_simulate12750000.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n1000_bin_cont/n1000_kstar_simulate12750000.txt -------------------------------------------------------------------------------- /examples/data/simulated_n1000_bin_cont/parameter-n1000_bin_cont.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n1000_bin_cont/parameter-n1000_bin_cont.txt -------------------------------------------------------------------------------- /examples/data/simulated_n1000_bin_cont/sample-n1000_bin_cont3800000.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n1000_bin_cont/sample-n1000_bin_cont3800000.txt -------------------------------------------------------------------------------- /examples/data/simulated_n500_bin_cont2/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n500_bin_cont2/README -------------------------------------------------------------------------------- /examples/data/simulated_n500_bin_cont2/binaryAttribute_50_50_n500.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n500_bin_cont2/binaryAttribute_50_50_n500.txt -------------------------------------------------------------------------------- /examples/data/simulated_n500_bin_cont2/continuousAttributes_n500.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n500_bin_cont2/continuousAttributes_n500.txt -------------------------------------------------------------------------------- /examples/data/simulated_n500_bin_cont2/n500_kstar_simulate12750000.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n500_bin_cont2/n500_kstar_simulate12750000.txt -------------------------------------------------------------------------------- /examples/data/simulated_n500_bin_cont2/parameter-n500_bin_cont.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n500_bin_cont2/parameter-n500_bin_cont.txt -------------------------------------------------------------------------------- /examples/data/simulated_n500_bin_cont2/sample-n500_bin_cont6700000.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/data/simulated_n500_bin_cont2/sample-n500_bin_cont6700000.txt -------------------------------------------------------------------------------- /examples/jobarray/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/Deezer/EE_ALAAMEE/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/EE_ALAAMEE/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/Deezer/EE_ALAAMEE/computeALAAMstatisticsDeezer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/EE_ALAAMEE/computeALAAMstatisticsDeezer.py -------------------------------------------------------------------------------- /examples/jobarray/Deezer/EE_ALAAMEE/get_times.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/EE_ALAAMEE/get_times.sh -------------------------------------------------------------------------------- /examples/jobarray/Deezer/EE_ALAAMEE/runALAAMEEDeezerParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/EE_ALAAMEE/runALAAMEEDeezerParallel.py -------------------------------------------------------------------------------- /examples/jobarray/Deezer/EE_ALAAMEE/runALAAMsimulateGoFDeezer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/EE_ALAAMEE/runALAAMsimulateGoFDeezer.py -------------------------------------------------------------------------------- /examples/jobarray/Deezer/EE_ALAAMEE/runALAAMsimulateGoFDeezerMoreStats.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/EE_ALAAMEE/runALAAMsimulateGoFDeezerMoreStats.py -------------------------------------------------------------------------------- /examples/jobarray/Deezer/EE_ALAAMEE/run_deezer_R_scripts_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/EE_ALAAMEE/run_deezer_R_scripts_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Deezer/EE_ALAAMEE/run_deezer_jobarray_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/EE_ALAAMEE/run_deezer_jobarray_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Deezer/EE_ALAAMEE/run_simulate_gof_deezer_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/EE_ALAAMEE/run_simulate_gof_deezer_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Deezer/SA_ALAAMEE/runALAAMSAdeezer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/SA_ALAAMEE/runALAAMSAdeezer.py -------------------------------------------------------------------------------- /examples/jobarray/Deezer/SA_ALAAMEE/run_deezer_sa_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/SA_ALAAMEE/run_deezer_sa_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Deezer/data/README.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/data/README.txt -------------------------------------------------------------------------------- /examples/jobarray/Deezer/data/deezer_europe.zip: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/data/deezer_europe.zip -------------------------------------------------------------------------------- /examples/jobarray/Deezer/data/get_deezer_data_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Deezer/data/get_deezer_data_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/computeALAAMstatisticsGemsecDeezerHR.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/computeALAAMstatisticsGemsecDeezerHR.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/computeALAAMstatisticsGemsecDeezerHU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/computeALAAMstatisticsGemsecDeezerHU.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/computeALAAMstatisticsGemsecDeezerRO.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/computeALAAMstatisticsGemsecDeezerRO.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/extractModelStats_hr.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/extractModelStats_hr.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/extractModelStats_hu.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/extractModelStats_hu.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/extractModelStats_ro.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/extractModelStats_ro.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/get_times.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/get_times.sh -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/model.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/modelHR.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/modelHR.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/modelHU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/modelHU.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/plot_model_degeneracy_checks.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/plot_model_degeneracy_checks.sh -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMEEGemsecDeezerHRParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMEEGemsecDeezerHRParallel.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMEEGemsecDeezerHUParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMEEGemsecDeezerHUParallel.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMEEGemsecDeezerROParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMEEGemsecDeezerROParallel.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMsimulateGoFGemsecDeezerHR.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMsimulateGoFGemsecDeezerHR.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMsimulateGoFGemsecDeezerHU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMsimulateGoFGemsecDeezerHU.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMsimulateGoFGemsecDeezerRO.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE/runALAAMsimulateGoFGemsecDeezerRO.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/extractModelStats_hr.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/extractModelStats_hr.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/extractModelStats_hu.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/extractModelStats_hu.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/extractModelStats_ro.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/extractModelStats_ro.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/get_times.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/get_times.sh -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/model.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/modelHR.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/modelHR.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/modelHU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_alternative/modelHU.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_igraph/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_igraph/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_igraph/model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_igraph/model.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/EE_ALAAMEE_igraph/readData.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/EE_ALAAMEE_igraph/readData.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE/runALAAMSAgemsecDeezerHR.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE/runALAAMSAgemsecDeezerHR.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE/runALAAMSAgemsecDeezerHU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE/runALAAMSAgemsecDeezerHU.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE/runALAAMSAgemsecDeezerRO.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE/runALAAMSAgemsecDeezerRO.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE/run_gemsec_deezer_hr_sa_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE/run_gemsec_deezer_hr_sa_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE/run_gemsec_deezer_hu_sa_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE/run_gemsec_deezer_hu_sa_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE/run_gemsec_deezer_ro_sa_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE/run_gemsec_deezer_ro_sa_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE_alternative/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE_alternative/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE_alternative/runALAAMSAgemsecDeezerHR.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE_alternative/runALAAMSAgemsecDeezerHR.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE_alternative/runALAAMSAgemsecDeezerHU.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE_alternative/runALAAMSAgemsecDeezerHU.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/SA_ALAAMEE_alternative/runALAAMSAgemsecDeezerRO.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/SA_ALAAMEE_alternative/runALAAMSAgemsecDeezerRO.py -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/data/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/data/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/data/README.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/data/README.txt -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/data/gemsec_deezer_dataset.tar.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/data/gemsec_deezer_dataset.tar.gz -------------------------------------------------------------------------------- /examples/jobarray/GemsecDeezer/data/get_gemsec_deezer_data_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GemsecDeezer/data/get_gemsec_deezer_data_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/computeALAAMstatisticsGithub.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/computeALAAMstatisticsGithub.py -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/extractModelStats.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/extractModelStats.py -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/model.py -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/plot_model_degeneracy_check.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/plot_model_degeneracy_check.sh -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/runALAAMEEGithubParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/runALAAMEEGithubParallel.py -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/runALAAMsimulateGoFGithub.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/runALAAMsimulateGoFGithub.py -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/run_github_R_scripts_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/run_github_R_scripts_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/run_github_jobarray_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/run_github_jobarray_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/run_github_parallel_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/run_github_parallel_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/GitHub/EE_ALAAMEE/run_simulate_gof_github_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/EE_ALAAMEE/run_simulate_gof_github_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/GitHub/data/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/data/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/GitHub/data/README.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/data/README.txt -------------------------------------------------------------------------------- /examples/jobarray/GitHub/data/get_github_data_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/GitHub/data/get_github_data_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/data/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/data/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/data/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/data/README -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/data/get_higgs_twitter_data_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/data/get_higgs_twitter_data_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/outcome_reply/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/outcome_reply/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/outcome_reply/computeALAAMstatisticsHiggs.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/outcome_reply/computeALAAMstatisticsHiggs.py -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/outcome_reply/model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/outcome_reply/model.py -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/outcome_reply/runALAAMEEhiggsParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/outcome_reply/runALAAMEEhiggsParallel.py -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/outcome_reply/runALAAMsimulateGoFHiggs.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/outcome_reply/runALAAMsimulateGoFHiggs.py -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/outcome_reply/run_higgs_R_scripts_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/outcome_reply/run_higgs_R_scripts_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/outcome_reply/run_higgs_jobarray_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/outcome_reply/run_higgs_jobarray_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/HiggsTwitter/outcome_reply/run_simulate_gof_higgs_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/HiggsTwitter/outcome_reply/run_simulate_gof_higgs_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Pokec/EE_ALAAMEE/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/EE_ALAAMEE/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/Pokec/EE_ALAAMEE/computeALAAMstatisticsPokec.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/EE_ALAAMEE/computeALAAMstatisticsPokec.py -------------------------------------------------------------------------------- /examples/jobarray/Pokec/EE_ALAAMEE/runALAAMEEpokecParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/EE_ALAAMEE/runALAAMEEpokecParallel.py -------------------------------------------------------------------------------- /examples/jobarray/Pokec/EE_ALAAMEE/runALAAMsimulateGoFPokec.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/EE_ALAAMEE/runALAAMsimulateGoFPokec.py -------------------------------------------------------------------------------- /examples/jobarray/Pokec/EE_ALAAMEE/run_pokec_R_scripts_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/EE_ALAAMEE/run_pokec_R_scripts_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Pokec/EE_ALAAMEE/run_pokec_jobarray_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/EE_ALAAMEE/run_pokec_jobarray_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Pokec/EE_ALAAMEE/run_simulate_gof_pokec_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/EE_ALAAMEE/run_simulate_gof_pokec_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Pokec/data/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/data/README -------------------------------------------------------------------------------- /examples/jobarray/Pokec/data/get_pokec_data_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/data/get_pokec_data_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Pokec/directed_EE_ALAAMEE/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/directed_EE_ALAAMEE/.gitignore -------------------------------------------------------------------------------- /examples/jobarray/Pokec/directed_EE_ALAAMEE/computeALAAMstatisticsPokec.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/directed_EE_ALAAMEE/computeALAAMstatisticsPokec.py -------------------------------------------------------------------------------- /examples/jobarray/Pokec/directed_EE_ALAAMEE/model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/directed_EE_ALAAMEE/model.py -------------------------------------------------------------------------------- /examples/jobarray/Pokec/directed_EE_ALAAMEE/runALAAMEEpokecParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/directed_EE_ALAAMEE/runALAAMEEpokecParallel.py -------------------------------------------------------------------------------- /examples/jobarray/Pokec/directed_EE_ALAAMEE/runALAAMsimulateGoFPokec.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/directed_EE_ALAAMEE/runALAAMsimulateGoFPokec.py -------------------------------------------------------------------------------- /examples/jobarray/Pokec/directed_EE_ALAAMEE/run_pokec_R_scripts_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/directed_EE_ALAAMEE/run_pokec_R_scripts_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Pokec/directed_EE_ALAAMEE/run_pokec_jobarray_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/directed_EE_ALAAMEE/run_pokec_jobarray_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Pokec/directed_EE_ALAAMEE/run_pokec_parallel_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/directed_EE_ALAAMEE/run_pokec_parallel_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/Pokec/directed_EE_ALAAMEE/run_simulate_gof_pokec_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/Pokec/directed_EE_ALAAMEE/run_simulate_gof_pokec_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/README -------------------------------------------------------------------------------- /examples/jobarray/runALAAMsimulateGoFexample.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/runALAAMsimulateGoFexample.py -------------------------------------------------------------------------------- /examples/jobarray/run_karateclub_R_scripts_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_karateclub_R_scripts_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/run_karateclub_jobarray_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_karateclub_jobarray_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/run_simple_N1000_R_scripts_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_simple_N1000_R_scripts_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/run_simple_R_scripts_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_simple_R_scripts_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/run_simple_example_N1000_jobarray_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_simple_example_N1000_jobarray_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/run_simple_example_jobarray_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_simple_example_jobarray_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/run_simulate_gof_example_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_simulate_gof_example_slurm_script.sh -------------------------------------------------------------------------------- /examples/jobarray/run_submit_karateclub_process_jobarray.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_submit_karateclub_process_jobarray.sh -------------------------------------------------------------------------------- /examples/jobarray/run_submit_simple_example_N1000_process_jobarray.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_submit_simple_example_N1000_process_jobarray.sh -------------------------------------------------------------------------------- /examples/jobarray/run_submit_simple_example_process_jobarray.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/jobarray/run_submit_simple_example_process_jobarray.sh -------------------------------------------------------------------------------- /examples/parallel/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/.gitignore -------------------------------------------------------------------------------- /examples/parallel/bipartite/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/bipartite/.gitignore -------------------------------------------------------------------------------- /examples/parallel/bipartite/computeALAAMstatisticsBipartiteExample.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/bipartite/computeALAAMstatisticsBipartiteExample.py -------------------------------------------------------------------------------- /examples/parallel/bipartite/runALAAMsimulateGoFBipartiteExample.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/bipartite/runALAAMsimulateGoFBipartiteExample.py -------------------------------------------------------------------------------- /examples/parallel/bipartite/run_bipartite_example_parallel_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/bipartite/run_bipartite_example_parallel_slurm_script.sh -------------------------------------------------------------------------------- /examples/parallel/bipartite/run_simulate_gof_bipartite_example_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/bipartite/run_simulate_gof_bipartite_example_slurm_script.sh -------------------------------------------------------------------------------- /examples/parallel/directed/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/directed/.gitignore -------------------------------------------------------------------------------- /examples/parallel/directed/run_simple_example_directed_parallel_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/directed/run_simple_example_directed_parallel_slurm_script.sh -------------------------------------------------------------------------------- /examples/parallel/run_karateclub_parallel_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/run_karateclub_parallel_slurm_script.sh -------------------------------------------------------------------------------- /examples/parallel/run_simple_example_parallel_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/parallel/run_simple_example_parallel_slurm_script.sh -------------------------------------------------------------------------------- /examples/simple/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/.gitignore -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/.gitignore -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/convertDevilDataToALAAMEEFormat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/convertDevilDataToALAAMEEFormat.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_DFTD_status_all.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_DFTD_status_all.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_DFTD_status_mating.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_DFTD_status_mating.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_DFTD_status_nonmating.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_DFTD_status_nonmating.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_binattr_all.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_binattr_all.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_binattr_mating.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_binattr_mating.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_binattr_nonmating.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_binattr_nonmating.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_catattr_all.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_catattr_all.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_catattr_mating.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_catattr_mating.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_catattr_nonmating.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_catattr_nonmating.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_contact_all.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_contact_all.net -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_contact_mating.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_contact_mating.net -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_contact_nonmating.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_contact_nonmating.net -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_contattr_all.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_contattr_all.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_contattr_mating.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_contattr_mating.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/devils_contattr_nonmating.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/devils_contattr_nonmating.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsSimpleModel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsSimpleModel.py -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsSimpleModel2.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsSimpleModel2.py -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsSimpleModel2_mating.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsSimpleModel2_mating.py -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsSimpleModel2_nonmating.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsSimpleModel2_nonmating.py -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsStructModel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsStructModel.py -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsStructModel1.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsStructModel1.py -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsStructModel1_mating.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsStructModel1_mating.py -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsStructModel1_nonmating.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsStructModel1_nonmating.py -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsThesisModel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/runALAAMSAdevilsThesisModel.py -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/run_sa_devils_simple_model.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/run_sa_devils_simple_model.sh -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/run_sa_devils_simple_model2.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/run_sa_devils_simple_model2.sh -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/run_sa_devils_simple_model2_mating.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/run_sa_devils_simple_model2_mating.sh -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/run_sa_devils_simple_model2_nonmating.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/run_sa_devils_simple_model2_nonmating.sh -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/run_sa_devils_struct_model.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/run_sa_devils_struct_model.sh -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/run_sa_devils_struct_model1.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/run_sa_devils_struct_model1.sh -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/run_sa_devils_struct_model1_mating.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/run_sa_devils_struct_model1_mating.sh -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/run_sa_devils_struct_model1_nonmating.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/run_sa_devils_struct_model1_nonmating.sh -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/ALAAM/run_sa_devils_thesis_model.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/ALAAM/run_sa_devils_thesis_model.sh -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/README -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/.gitignore -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/GeodesicDistribution.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/GeodesicDistribution.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/README -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/load_data.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/load_data.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/runDevilSienaModel03.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/runDevilSienaModel03.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/runDevilSienaModel04.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/runDevilSienaModel04.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/runDevilSienaModel09.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/runDevilSienaModel09.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/runDevilSienaModel10.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/runDevilSienaModel10.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/runDevilSienaModel11.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/runDevilSienaModel11.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/runDevilSienaModel12.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/runDevilSienaModel12.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/SAOM/runDevilSienaModel13.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/SAOM/runDevilSienaModel13.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/.gitignore: -------------------------------------------------------------------------------- 1 | TERGM_code.out 2 | -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/DFTDstatus.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/DFTDstatus.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/README -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/README_data.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/README_data.txt -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/Season.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/Season.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/SexTERGM.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/SexTERGM.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/TERGM_code.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/TERGM_code.R -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/TERGM_code.txt.ORIG: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/TERGM_code.txt.ORIG -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/TumourLoad_factor.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/TumourLoad_factor.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/Wounds.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/Wounds.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f1.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f1.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f10.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f10.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f11.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f11.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f12.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f12.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f2.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f3.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f3.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f4.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f4.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f5.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f5.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f6.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f6.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f7.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f7.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f8.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f8.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/f9.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/f9.csv -------------------------------------------------------------------------------- /examples/simple/TasmanianDevils/tergm_replication/run_TERGM_code.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/TasmanianDevils/tergm_replication/run_TERGM_code.sh -------------------------------------------------------------------------------- /examples/simple/badgers/.gitignore: -------------------------------------------------------------------------------- 1 | run_sa_badgers*.out 2 | -------------------------------------------------------------------------------- /examples/simple/badgers/data/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/data/README -------------------------------------------------------------------------------- /examples/simple/badgers/data/badgers_TBpos.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/data/badgers_TBpos.txt -------------------------------------------------------------------------------- /examples/simple/badgers/data/badgers_binattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/data/badgers_binattr.txt -------------------------------------------------------------------------------- /examples/simple/badgers/data/badgers_catattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/data/badgers_catattr.txt -------------------------------------------------------------------------------- /examples/simple/badgers/data/badgers_contattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/data/badgers_contattr.txt -------------------------------------------------------------------------------- /examples/simple/badgers/data/badgers_overallnetwork.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/data/badgers_overallnetwork.net -------------------------------------------------------------------------------- /examples/simple/badgers/data/convertBadgerDataToALAAMEEFormat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/data/convertBadgerDataToALAAMEEFormat.R -------------------------------------------------------------------------------- /examples/simple/badgers/data/mee312770-sup-0001-supinfo.zip: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/data/mee312770-sup-0001-supinfo.zip -------------------------------------------------------------------------------- /examples/simple/badgers/runALAAMSAbadgers.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/runALAAMSAbadgers.py -------------------------------------------------------------------------------- /examples/simple/badgers/runALAAMSAbadgersDistance.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/runALAAMSAbadgersDistance.py -------------------------------------------------------------------------------- /examples/simple/badgers/runALAAMSAbadgersMore.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/runALAAMSAbadgersMore.py -------------------------------------------------------------------------------- /examples/simple/badgers/runALAAMSAbadgersNoEigenvector.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/runALAAMSAbadgersNoEigenvector.py -------------------------------------------------------------------------------- /examples/simple/badgers/runALAAMSAbadgersSimpleModel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/runALAAMSAbadgersSimpleModel.py -------------------------------------------------------------------------------- /examples/simple/badgers/run_sa_badgers.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/run_sa_badgers.sh -------------------------------------------------------------------------------- /examples/simple/badgers/run_sa_badgers_distance.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/run_sa_badgers_distance.sh -------------------------------------------------------------------------------- /examples/simple/badgers/run_sa_badgers_more.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/run_sa_badgers_more.sh -------------------------------------------------------------------------------- /examples/simple/badgers/run_sa_badgers_no_eigenvector.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/run_sa_badgers_no_eigenvector.sh -------------------------------------------------------------------------------- /examples/simple/badgers/run_sa_badgers_simple_model.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/badgers/run_sa_badgers_simple_model.sh -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/README -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/Boards and Gender.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/Boards and Gender.pdf -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/README.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/README.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/data_companies.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/data_companies.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/data_people.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/data_people.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2002-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2003-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2004-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2005-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2006-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2007-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2008-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2009-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2010-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net1m_2011-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2002-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2003-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2004-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2005-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2006-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2007-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-10-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-10-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-11-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-11-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-12-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2008-12-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-01-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-01-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-02-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-02-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-03-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-03-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-04-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-04-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-05-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-05-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-06-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-06-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-07-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-07-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-08-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-08-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-09-01.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/data/net2m_2009-09-01.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/get_seierstad_data.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/get_seierstad_data.sh -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/gof_stats.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/gof_stats.py -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/model_betweenness.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/model_betweenness.py -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/model_birank.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/model_birank.py -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/model_gwactivity.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/model_gwactivity.py -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/model_harmonic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/model_harmonic.py -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/model_nostruct.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/model_nostruct.py -------------------------------------------------------------------------------- /examples/simple/bipartite/Seierstad_director_interlocks/model_struct.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/Seierstad_director_interlocks/model_struct.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/.gitignore -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/README -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/computeALAAMstatisticsStLouisCrime.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/computeALAAMstatisticsStLouisCrime.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/convertStLouisCrimeDataToALAAMEEFormat.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/convertStLouisCrimeDataToALAAMEEFormat.R -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/crime_binattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/crime_binattr.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/crime_bipartite.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/crime_bipartite.net -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/crime_catattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/crime_catattr.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/crime_contattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/crime_contattr.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/crime_outcome.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/crime_outcome.txt -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/gof_stats.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/gof_stats.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/model.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/model_betweenness.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/model_betweenness.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/model_gwactivity.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/model_gwactivity.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/model_harmonic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/model_harmonic.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/model_nostruct.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/model_nostruct.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/runALAAMEEStLouisCrimeParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/runALAAMEEStLouisCrimeParallel.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime_betweenness.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime_betweenness.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime_gwactivity.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime_gwactivity.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime_harmonic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime_harmonic.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime_nostruct.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/runALAAMSAStLouisCrime_nostruct.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/runALAAMsimulateGoFStLouisCrime.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/runALAAMsimulateGoFStLouisCrime.py -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/run_StLouisCrime_jobarray_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/run_StLouisCrime_jobarray_slurm_script.sh -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/run_StLouisCrime_parallel_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/run_StLouisCrime_parallel_slurm_script.sh -------------------------------------------------------------------------------- /examples/simple/bipartite/StLouisCrime/run_StLouisCrime_sa_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/bipartite/StLouisCrime/run_StLouisCrime_sa_slurm_script.sh -------------------------------------------------------------------------------- /examples/simple/directed/.gitignore: -------------------------------------------------------------------------------- 1 | alaam_sa_directed-*.??? 2 | -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/.gitignore -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/README -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/gof_stats.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/gof_stats.py -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_class.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_class.py -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_class_gw.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_class_gw.py -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_class_more.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_class_more.py -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_gender.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_gender.py -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_gender_gw.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/runALAAMSAhighschool_gender_gw.py -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/runALAAMsimulateGoFHighschool.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/runALAAMsimulateGoFHighschool.py -------------------------------------------------------------------------------- /examples/simple/directed/HighSchoolFriendship/run_sa_highschool_class_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/HighSchoolFriendship/run_sa_highschool_class_example.sh -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/.gitignore -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/README -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/gof_stats.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/gof_stats.py -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/runALAAMSAs50.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/runALAAMSAs50.py -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/runALAAMSAs50GW.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/runALAAMSAs50GW.py -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/runALAAMSAs50simpleModel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/runALAAMSAs50simpleModel.py -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/runALAAMSAs50simpleModelGW.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/runALAAMSAs50simpleModelGW.py -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/run_sa_s50_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/run_sa_s50_example.sh -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/run_sa_s50_example_gw.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/run_sa_s50_example_gw.sh -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/run_sa_s50_example_simple_model.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/run_sa_s50_example_simple_model.sh -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/run_sa_s50_example_simple_model_gw.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/run_sa_s50_example_simple_model_gw.sh -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/s50-binattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/s50-binattr.txt -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/s50-catattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/s50-catattr.txt -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/s50-contattr.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/s50-contattr.txt -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/s50-friendships-adjmatrix.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/s50-friendships-adjmatrix.txt -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/s50-friendships-directed.net: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/s50-friendships-directed.net -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/s50-outcome.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/s50-outcome.txt -------------------------------------------------------------------------------- /examples/simple/directed/glasgow_s50/s50.pnet: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/glasgow_s50/s50.pnet -------------------------------------------------------------------------------- /examples/simple/directed/run_simple_sa_directed_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/directed/run_simple_sa_directed_example.sh -------------------------------------------------------------------------------- /examples/simple/run_karateclub_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_karateclub_example.sh -------------------------------------------------------------------------------- /examples/simple/run_karateclub_sa_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_karateclub_sa_example.sh -------------------------------------------------------------------------------- /examples/simple/run_karateclub_sa_example_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_karateclub_sa_example_slurm_script.sh -------------------------------------------------------------------------------- /examples/simple/run_sa_bipartite_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_sa_bipartite_example.sh -------------------------------------------------------------------------------- /examples/simple/run_simple_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_simple_example.sh -------------------------------------------------------------------------------- /examples/simple/run_simple_example_zoo_sampler.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_simple_example_zoo_sampler.sh -------------------------------------------------------------------------------- /examples/simple/run_simple_sa_N1000_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_simple_sa_N1000_example.sh -------------------------------------------------------------------------------- /examples/simple/run_simple_sa_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_simple_sa_example.sh -------------------------------------------------------------------------------- /examples/simple/run_simple_sa_example_ozstar_slurm_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_simple_sa_example_ozstar_slurm_script.sh -------------------------------------------------------------------------------- /examples/simple/run_simple_sa_example_zoo_sampler.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_simple_sa_example_zoo_sampler.sh -------------------------------------------------------------------------------- /examples/simple/run_simulate_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_simulate_example.sh -------------------------------------------------------------------------------- /examples/simple/run_simulate_example_zoo_sampler.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_simulate_example_zoo_sampler.sh -------------------------------------------------------------------------------- /examples/simple/run_simulate_gof_example.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/examples/simple/run_simulate_gof_example.sh -------------------------------------------------------------------------------- /python/.gitignore: -------------------------------------------------------------------------------- 1 | *.sh~ 2 | *.py~ 3 | .nfs* 4 | -------------------------------------------------------------------------------- /python/BipartiteGraph.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/BipartiteGraph.py -------------------------------------------------------------------------------- /python/Digraph.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/Digraph.py -------------------------------------------------------------------------------- /python/Graph.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/Graph.py -------------------------------------------------------------------------------- /python/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/README -------------------------------------------------------------------------------- /python/SparseMatrix.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/SparseMatrix.py -------------------------------------------------------------------------------- /python/basicALAAMsampler.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/basicALAAMsampler.py -------------------------------------------------------------------------------- /python/bipartiteALAAMsampler.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/bipartiteALAAMsampler.py -------------------------------------------------------------------------------- /python/changeStatisticsALAAM.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/changeStatisticsALAAM.py -------------------------------------------------------------------------------- /python/changeStatisticsALAAMbipartite.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/changeStatisticsALAAMbipartite.py -------------------------------------------------------------------------------- /python/changeStatisticsALAAMdirected.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/changeStatisticsALAAMdirected.py -------------------------------------------------------------------------------- /python/computeALAAMstatisticsSimpleDemo.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/computeALAAMstatisticsSimpleDemo.py -------------------------------------------------------------------------------- /python/computeObservedStatistics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/computeObservedStatistics.py -------------------------------------------------------------------------------- /python/conditionalALAAMsampler.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/conditionalALAAMsampler.py -------------------------------------------------------------------------------- /python/equilibriumExpectation.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/equilibriumExpectation.py -------------------------------------------------------------------------------- /python/equilibriumExpectationBorisenko.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/equilibriumExpectationBorisenko.py -------------------------------------------------------------------------------- /python/estimateALAAMEE.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/estimateALAAMEE.py -------------------------------------------------------------------------------- /python/estimateALAAMSA.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/estimateALAAMSA.py -------------------------------------------------------------------------------- /python/gofALAAM.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/gofALAAM.py -------------------------------------------------------------------------------- /python/igraphConvert.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/igraphConvert.py -------------------------------------------------------------------------------- /python/initialEstimator.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/initialEstimator.py -------------------------------------------------------------------------------- /python/parseEstimationEEOutput.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/parseEstimationEEOutput.py -------------------------------------------------------------------------------- /python/runALAAMEEBipartiteDemoParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEEBipartiteDemoParallel.py -------------------------------------------------------------------------------- /python/runALAAMEESimpleDemo.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEESimpleDemo.py -------------------------------------------------------------------------------- /python/runALAAMEESimpleDemoN1000Parallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEESimpleDemoN1000Parallel.py -------------------------------------------------------------------------------- /python/runALAAMEESimpleDemoParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEESimpleDemoParallel.py -------------------------------------------------------------------------------- /python/runALAAMEESimpleDemoParallelDirected.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEESimpleDemoParallelDirected.py -------------------------------------------------------------------------------- /python/runALAAMEESimpleDemoSnowball.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEESimpleDemoSnowball.py -------------------------------------------------------------------------------- /python/runALAAMEESimpleDemoSnowballParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEESimpleDemoSnowballParallel.py -------------------------------------------------------------------------------- /python/runALAAMEESimpleDemoZooSampler.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEESimpleDemoZooSampler.py -------------------------------------------------------------------------------- /python/runALAAMEEkarateClub.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEEkarateClub.py -------------------------------------------------------------------------------- /python/runALAAMEEkarateClubParallel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMEEkarateClubParallel.py -------------------------------------------------------------------------------- /python/runALAAMSABipartiteSimpleDemo.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMSABipartiteSimpleDemo.py -------------------------------------------------------------------------------- /python/runALAAMSASimpleDemo.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMSASimpleDemo.py -------------------------------------------------------------------------------- /python/runALAAMSASimpleDemoDirected.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMSASimpleDemoDirected.py -------------------------------------------------------------------------------- /python/runALAAMSASimpleDemoN1000.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMSASimpleDemoN1000.py -------------------------------------------------------------------------------- /python/runALAAMSASimpleDemoSnowball.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMSASimpleDemoSnowball.py -------------------------------------------------------------------------------- /python/runALAAMSASimpleDemoZooSampler.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMSASimpleDemoZooSampler.py -------------------------------------------------------------------------------- /python/runALAAMSAkarateClub.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMSAkarateClub.py -------------------------------------------------------------------------------- /python/runALAAMsimulateSimpleDemo.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMsimulateSimpleDemo.py -------------------------------------------------------------------------------- /python/runALAAMsimulateSimpleDemoZooSampler.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/runALAAMsimulateSimpleDemoZooSampler.py -------------------------------------------------------------------------------- /python/simulateALAAM.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/simulateALAAM.py -------------------------------------------------------------------------------- /python/simulateALAAMsimpleDemo.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/simulateALAAMsimpleDemo.py -------------------------------------------------------------------------------- /python/stochasticApproximation.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/stochasticApproximation.py -------------------------------------------------------------------------------- /python/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/utils.py -------------------------------------------------------------------------------- /python/zooALAAMsampler.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/python/zooALAAMsampler.py -------------------------------------------------------------------------------- /releasenotes.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/releasenotes.txt -------------------------------------------------------------------------------- /scripts/EEEstimation2textableMultiModels.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/EEEstimation2textableMultiModels.sh -------------------------------------------------------------------------------- /scripts/EEEstimation2textableSingleModel.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/EEEstimation2textableSingleModel.sh -------------------------------------------------------------------------------- /scripts/build_alaamee_estimation_fixed_total_runs_results_tab.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/build_alaamee_estimation_fixed_total_runs_results_tab.sh -------------------------------------------------------------------------------- /scripts/build_alaamee_estimation_results_tab.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/build_alaamee_estimation_results_tab.sh -------------------------------------------------------------------------------- /scripts/build_alaamee_estimation_var_total_runs_results_tab.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/build_alaamee_estimation_var_total_runs_results_tab.sh -------------------------------------------------------------------------------- /scripts/build_alaamee_estimation_var_total_runs_results_tab_faster.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/build_alaamee_estimation_var_total_runs_results_tab_faster.sh -------------------------------------------------------------------------------- /scripts/build_estimation_dir.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/build_estimation_dir.sh -------------------------------------------------------------------------------- /scripts/formatestimatorresultstabletex.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/formatestimatorresultstabletex.sh -------------------------------------------------------------------------------- /scripts/formatestimatorresultstabletexFalseNegatives.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/formatestimatorresultstabletexFalseNegatives.sh -------------------------------------------------------------------------------- /scripts/formatestimatorresultstabletexFalsePositives.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/formatestimatorresultstabletexFalsePositives.sh -------------------------------------------------------------------------------- /scripts/getbashtimes.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/getbashtimes.sh -------------------------------------------------------------------------------- /scripts/reorderAlaamTextable.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/reorderAlaamTextable.sh -------------------------------------------------------------------------------- /scripts/stochasticApproxEstimation2textableMultiModels.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/stochasticApproxEstimation2textableMultiModels.sh -------------------------------------------------------------------------------- /scripts/stochasticApproxEstimation2textableSingleModel.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/stochasticApproxEstimation2textableSingleModel.sh -------------------------------------------------------------------------------- /scripts/stochasticApproxGoF2textableMultiModels.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/stochasticApproxGoF2textableMultiModels.sh -------------------------------------------------------------------------------- /scripts/templates/runALAAMEEproject90simulatedParallel.py.template: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/templates/runALAAMEEproject90simulatedParallel.py.template -------------------------------------------------------------------------------- /scripts/templates/run_project90sim_R_scripts_slurm_script.sh.template: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/templates/run_project90sim_R_scripts_slurm_script.sh.template -------------------------------------------------------------------------------- /scripts/templates/run_project90simulated_parallel_slurm_script.sh.template: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/templates/run_project90simulated_parallel_slurm_script.sh.template -------------------------------------------------------------------------------- /scripts/update_estimation_dir_more_runs.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/scripts/update_estimation_dir_more_runs.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/GitHubSimulations/Activity/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/GitHubSimulations/Activity/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/GitHubSimulations/Contagion/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/GitHubSimulations/Contagion/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/GitHubSimulations/data/.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/GitHubSimulations/data/.gitignore -------------------------------------------------------------------------------- /simulations/AlaamSimulations/HighSchoolFriendship/Receiver/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/HighSchoolFriendship/Receiver/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/HighSchoolFriendship/Sender/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/HighSchoolFriendship/Sender/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/HighSchoolFriendship/data/get_adjacency_matrix.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/HighSchoolFriendship/data/get_adjacency_matrix.R -------------------------------------------------------------------------------- /simulations/AlaamSimulations/deezerEuropeSimulations/Activity/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/deezerEuropeSimulations/Activity/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/deezerEuropeSimulations/TwoStar/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/deezerEuropeSimulations/TwoStar/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/higgsTwitterSimulations/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/higgsTwitterSimulations/README -------------------------------------------------------------------------------- /simulations/AlaamSimulations/higgsTwitterSimulations/Receiver/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/higgsTwitterSimulations/Receiver/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/higgsTwitterSimulations/Sender/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/higgsTwitterSimulations/Sender/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/higgsTwitterSimulations/data/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/higgsTwitterSimulations/data/README -------------------------------------------------------------------------------- /simulations/AlaamSimulations/latticeSimulations/Activity/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/latticeSimulations/Activity/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/latticeSimulations/Contagion/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/latticeSimulations/Contagion/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/latticeSimulations/data/make_lattice.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/latticeSimulations/data/make_lattice.R -------------------------------------------------------------------------------- /simulations/AlaamSimulations/pokec/Activity/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/pokec/Activity/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/pokec/Activity/runALAAMsimulatePokec.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/pokec/Activity/runALAAMsimulatePokec.py -------------------------------------------------------------------------------- /simulations/AlaamSimulations/pokec/Contagion/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/pokec/Contagion/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/pokec/Contagion/runALAAMsimulatePokec.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/pokec/Contagion/runALAAMsimulatePokec.py -------------------------------------------------------------------------------- /simulations/AlaamSimulations/pokec/data/READFME: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/pokec/data/READFME -------------------------------------------------------------------------------- /simulations/AlaamSimulations/pokec/data/get_pokec_data.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/pokec/data/get_pokec_data.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/pokec/observed/computeALAAMstatisticsPokec.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/pokec/observed/computeALAAMstatisticsPokec.py -------------------------------------------------------------------------------- /simulations/AlaamSimulations/project90Simulations/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/project90Simulations/README -------------------------------------------------------------------------------- /simulations/AlaamSimulations/project90Simulations/collect_results.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/project90Simulations/collect_results.sh -------------------------------------------------------------------------------- /simulations/AlaamSimulations/project90Simulations/data/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/project90Simulations/data/README -------------------------------------------------------------------------------- /simulations/AlaamSimulations/project90Simulations/runALAAMsimulateProject90.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/AlaamSimulations/project90Simulations/runALAAMsimulateProject90.py -------------------------------------------------------------------------------- /simulations/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/README -------------------------------------------------------------------------------- /simulations/results/plotAlaamPhaseTransitions.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/results/plotAlaamPhaseTransitions.R -------------------------------------------------------------------------------- /simulations/results/plotAlaamPhaseTransitionsGW.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/results/plotAlaamPhaseTransitionsGW.R -------------------------------------------------------------------------------- /simulations/results/plot_mean_and_variance.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/simulations/results/plot_mean_and_variance.R -------------------------------------------------------------------------------- /tests/bipartitematrix.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/tests/bipartitematrix.py -------------------------------------------------------------------------------- /tests/run_tests.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/tests/run_tests.sh -------------------------------------------------------------------------------- /tests/s50_sim.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/tests/s50_sim.txt -------------------------------------------------------------------------------- /tests/tests.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/tests/tests.py -------------------------------------------------------------------------------- /tests/tests_igraph.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/stivalaa/ALAAMEE/HEAD/tests/tests_igraph.py --------------------------------------------------------------------------------