├── .gitignore ├── LICENSE ├── README.md ├── data ├── NHANES │ ├── NHANES.csv │ ├── NHANES_feature_list.csv │ ├── NHANES_feature_list_Display_name.csv │ └── NHANES_reference_interval_dict.pkl └── UKB │ └── overlapped_NHANES_UKB.csv ├── model ├── IMPACT-20 │ ├── IMPACT-20_features.csv │ ├── IMPACT_10_year_top20.pickle.dat │ ├── IMPACT_1_year_top20.pickle.dat │ ├── IMPACT_3_year_top20.pickle.dat │ ├── IMPACT_5_year_CBC_BMP.pickle.dat │ ├── IMPACT_5_year_Demo_Exam_Ques_top20.pickle.dat │ ├── IMPACT_5_year_Demo_Lab_top20.pickle.dat │ └── IMPACT_5_year_top20.pickle.dat ├── NHANES_10_year │ ├── fore_data.csv │ ├── model.pickle.dat │ └── shap_values.npy ├── NHANES_1_year │ ├── fore_data.csv │ ├── model.pickle.dat │ └── shap_values.npy ├── NHANES_3_year │ ├── fore_data.csv │ ├── model.pickle.dat │ └── shap_values.npy ├── NHANES_5_year │ ├── fore_data.csv │ ├── model.pickle.dat │ └── shap_values.npy ├── NHANES_5_year_51_features │ ├── fore_data.csv │ ├── model.pickle.dat │ └── shap_values.npy ├── NHANES_5_year_age_18_40 │ ├── fore_data.csv │ ├── model.pickle.dat │ └── shap_values.npy ├── NHANES_5_year_age_40_65 │ ├── fore_data.csv │ ├── model.pickle.dat │ └── shap_values.npy ├── NHANES_5_year_age_65_80 │ ├── fore_data.csv │ ├── model.pickle.dat │ └── shap_values.npy ├── NHANES_5_year_age_80+ │ ├── fore_data.csv │ ├── model.pickle.dat │ └── shap_values.npy ├── UKB_51_features │ └── model.pickle.dat └── model_features.csv ├── mortality_risk_scores_feature_elimination.ipynb ├── shap_NHANES_classification.py ├── supervised_distance_feature_elimination.ipynb └── visualization.ipynb /.gitignore: -------------------------------------------------------------------------------- 1 | .ipynb_checkpoints 2 | -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/suinleelab/IMPACT/HEAD/LICENSE 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