├── .gitignore ├── README.md ├── pssp-data ├── amino_acid_test.png ├── amino_acid_train.png ├── secondary_structure_test.png ├── secondary_structure_train.png ├── seqlen_test.png └── seqlen_train.png ├── pssp-nn ├── load_dataset.py ├── main.py ├── make_dataset.py ├── model.py └── utils.py └── pssp-transformer ├── dataset.py ├── download_dataset.py ├── main.py ├── preprocess.py ├── transformer ├── Beam.py ├── Constants.py ├── Layers.py ├── Models.py ├── Modules.py ├── Optim.py ├── SubLayers.py ├── Translator.py └── __init__.py ├── translate.py └── utils.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/takatex/protein-secondary-structure-prediction/HEAD/.gitignore -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- 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