├── .gitattributes ├── .gitignore ├── LICENSE ├── README.md ├── app ├── __init__.py ├── callback.py ├── datasets │ ├── AugmentConfig.py │ ├── DatasetConfig.py │ ├── NormalizeConfig.py │ ├── __init__.py │ ├── dataset_loader.py │ ├── dataset_utility.py │ ├── image_augmentizer.py │ └── image_normalizer.py ├── generator.py ├── grad_cam.py ├── imagetoolbox │ ├── ImageConfig.py │ ├── ImageConfigBase.py │ └── __init__.py ├── loss_functions │ ├── __init__.py │ └── chexnet_loss.py ├── main │ ├── Actions.py │ ├── Tester.py │ ├── Trainer.py │ ├── Visualizer.py │ └── __init__.py ├── models │ ├── ModelConfig.py │ ├── README.md │ ├── __init__.py │ └── model_factory.py ├── utilities │ ├── Config.py │ ├── ConfigBase.py │ ├── __init__.py │ ├── metrics.py │ └── util_config.py ├── utility.py └── weights.py ├── chexnet_config_sample.ini ├── datasets └── chexnet_ds │ ├── gen_data_entry.py │ ├── image_data_entry.csv │ ├── magick_wrapper.sh │ ├── resize.py │ ├── resize_img.py │ └── resizeall.sh ├── kmi_test ├── kmi_train ├── kmi_vis ├── requirements.txt └── test ├── __init__.py ├── augment_config.ini ├── augment_config_flip_prob.ini ├── augment_config_lr.ini ├── augment_config_noaug.ini ├── augment_config_ud.ini ├── empty.ini ├── normalize_config.ini ├── test_DataSet.py ├── test_DatasetConfig.py ├── test_ImageConfig.py ├── test_Trainer.py ├── test_augmentConfig.py ├── test_chexnet_data.ipynb ├── test_imageAugmentizer.py └── test_normalizeConfig.py /.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/taoyilee/Keras_MedicalImgAI/HEAD/.gitattributes -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/taoyilee/Keras_MedicalImgAI/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: 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