├── .github ├── pull_request_template.md └── workflows │ ├── count-lines-of-code.yml │ ├── draft-pdf.yml │ ├── lighthouserc.json │ ├── release.yml │ ├── run_tox.yml │ ├── test_docs.yml │ ├── test_end_to_end.yml │ └── test_target_project_docs.yml ├── .gitignore ├── .pre-commit-config.yaml ├── .readthedocs.yaml ├── CODE_OF_CONDUCT.md ├── CONTRIBUTING.md ├── LICENSE ├── README.md ├── bibat ├── __init__.py ├── fitting.py ├── fitting_mode.py ├── inference_configuration.py ├── prepared_data.py └── util.py ├── copier.yml ├── docs ├── _static │ ├── bibat-dark.svg │ ├── bibat-light.svg │ ├── bibat.svg │ ├── fig.png │ ├── posterior_quantiles.png │ └── report.html ├── accessibility.md ├── api.md ├── contributing.md ├── getting_started.md ├── img │ ├── bibat-light.svg │ └── favicon.ico ├── index.md ├── vignettes.md └── working_with_bibat.md ├── example_projects └── baseball │ ├── CODE_OF_CONDUCT.md │ ├── LICENSE │ ├── Makefile │ ├── README.md │ ├── data │ └── raw │ │ ├── 2006.csv │ │ ├── bdb-apps.csv │ │ ├── bdb-main.csv │ │ ├── bdb-post.csv │ │ └── readme.md │ ├── docs │ ├── bibliography.bib │ ├── img │ │ ├── example.png │ │ └── readme.md │ ├── report.html │ ├── report.pdf │ └── report.qmd │ ├── inferences │ ├── gpareto2006 │ │ └── config.toml │ ├── gparetobdb │ │ └── config.toml │ ├── normal2006 │ │ └── config.toml │ └── normalbdb │ │ └── config.toml │ ├── notebooks │ └── investigate.ipynb │ ├── plots │ ├── posterior_ll_comparison.png │ ├── posterior_predictive_comparison.png │ ├── posterior_quantiles.png │ ├── prior_quantiles.png │ ├── raw_data.png │ └── readme.md │ ├── pyproject.toml │ ├── src │ ├── __init__.py │ ├── data_preparation.py │ ├── fetch_data.py │ ├── fitting.py │ ├── stan │ │ ├── custom_functions.stan │ │ ├── gpareto.stan │ │ ├── normal.stan │ │ └── readme.md │ └── stan_input_functions.py │ └── tests │ └── test_integration │ └── test_data_preparation.py ├── mkdocs.yml ├── paper ├── .gitignore ├── _quarto.yml ├── automl-template.tex ├── automl.sty ├── bibliography.bib ├── img │ ├── baseball.png │ ├── workflow.png │ └── workflow.svg ├── main.html ├── main.pdf ├── main.qmd ├── mathjax.html └── title.tex ├── pyproject.toml ├── template ├── CODE_OF_CONDUCT.md.jinja ├── LICENSE.jinja ├── Makefile.jinja ├── README.md.jinja ├── data │ └── raw │ │ ├── raw_measurements.csv │ │ └── readme.md ├── inferences │ ├── fake_interaction │ │ └── config.toml │ ├── interaction │ │ └── config.toml │ └── no_interaction │ │ └── config.toml ├── notebooks │ └── investigate.ipynb ├── plots │ └── readme.md ├── pyproject.toml.jinja ├── src │ ├── __init__.py │ ├── data_preparation.py │ ├── fitting.py │ ├── stan │ │ ├── custom_functions.stan │ │ ├── multilevel-linear-regression.stan │ │ └── readme.md │ └── stan_input_functions.py ├── tests │ └── test_integration │ │ └── test_data_preparation.py ├── {% if create_dotgithub_directory %}.github{% endif %} │ └── workflows │ │ └── run_pytest.yml └── {% if docs_format != 'None' %}docs{% endif %} │ ├── bibliography.bib │ ├── img │ ├── example.png │ └── readme.md │ ├── {% if docs_format == 'Quarto' %}report.qmd{% endif %}.jinja │ ├── {% if docs_format == 'Sphinx' %}_static{% endif %} │ └── readme.md │ ├── {% if docs_format == 'Sphinx' %}conf.py{% endif %}.jinja │ └── {% if docs_format == 'Sphinx' %}index.rst{% endif %}.jinja ├── tests ├── data │ ├── config_sphinx.yml │ └── example_config.yml └── test_unit │ ├── test_copier.py │ ├── test_fitting.py │ ├── test_fitting_mode.py │ ├── test_inference_configuration.py │ └── test_util.py └── tox.ini /.github/pull_request_template.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/teddygroves/bibat/HEAD/.github/pull_request_template.md -------------------------------------------------------------------------------- /.github/workflows/count-lines-of-code.yml: -------------------------------------------------------------------------------- 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