├── .editorconfig ├── .flake8 ├── .github └── workflows │ └── test.yml ├── .gitignore ├── .pre-commit-config.yaml ├── LICENSE ├── README.md ├── codecov.yml ├── docs ├── Makefile ├── _templates │ ├── autosummary │ │ └── class.rst │ └── class_no_inherited.rst ├── api │ └── index.rst ├── conf.py ├── extensions │ └── typed_returns.py ├── index.rst ├── installation.rst ├── make.bat ├── release_notes │ ├── index.rst │ └── v2.0.rst ├── sketch.png └── tutorials │ ├── index.rst │ ├── scgen_batch_removal.ipynb │ └── scgen_perturbation_prediction.ipynb ├── pyproject.toml ├── readthedocs.yml ├── scgen ├── __init__.py ├── _base_components.py ├── _scgen.py ├── _scgenvae.py └── _utils.py ├── setup.py ├── sketch └── sketch.png └── tests ├── __init__.py └── test_scgen.py /.editorconfig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/theislab/scgen/HEAD/.editorconfig 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