├── .Rbuildignore ├── .github ├── .gitignore ├── CODE_OF_CONDUCT.md └── workflows │ ├── R-CMD-check-hard.yaml │ ├── R-CMD-check.yaml │ ├── lock.yaml │ ├── pkgdown.yaml │ ├── pr-commands.yaml │ └── test-coverage.yaml ├── .gitignore ├── .vscode ├── extensions.json └── settings.json ├── DESCRIPTION ├── LICENSE ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── bound_prediction.R ├── butcher.R ├── cal-apply-binary.R ├── cal-apply-impl.R ├── cal-apply-multi.R ├── cal-apply-regression.R ├── cal-apply.R ├── cal-estimate-beta.R ├── cal-estimate-isotonic.R ├── cal-estimate-linear.R ├── cal-estimate-logistic.R ├── cal-estimate-multinomial.R ├── cal-estimate-none.R ├── cal-estimate-utils.R ├── cal-pkg-check.R ├── cal-plot-breaks.R ├── cal-plot-logistic.R ├── cal-plot-regression.R ├── cal-plot-utils.R ├── cal-plot-windowed.R ├── cal-utils.R ├── cal-validate.R ├── class-pred.R ├── conformal_infer_cv.R ├── conformal_infer_full.R ├── conformal_infer_quantile.R ├── conformal_infer_split.R ├── data.R ├── import-standalone-obj-type.R ├── import-standalone-types-check.R ├── make_class_pred.R ├── printing.R ├── probably-package.R ├── reexports.R ├── threshold_perf.R ├── utils.R ├── vctrs-compat.R └── zzz.R ├── README.Rmd ├── README.md ├── _pkgdown.yml ├── air.toml ├── codecov.yml ├── data ├── boosting_predictions.RData ├── datalist ├── segment_logistic.RData ├── segment_naive_bayes.RData └── species_probs.RData ├── man-roxygen ├── metrics_both.R ├── metrics_cls.R ├── metrics_reg.R └── multiclass.R ├── man ├── append_class_pred.Rd ├── as_class_pred.Rd ├── boosting_predictions.Rd ├── bound_prediction.Rd ├── cal_apply.Rd ├── cal_binary_tables.Rd ├── cal_estimate_beta.Rd ├── cal_estimate_isotonic.Rd ├── cal_estimate_isotonic_boot.Rd ├── cal_estimate_linear.Rd ├── cal_estimate_logistic.Rd ├── cal_estimate_multinomial.Rd ├── cal_estimate_none.Rd ├── cal_plot_breaks.Rd ├── cal_plot_logistic.Rd ├── cal_plot_regression.Rd ├── cal_plot_windowed.Rd ├── cal_validate_beta.Rd ├── cal_validate_isotonic.Rd ├── cal_validate_isotonic_boot.Rd ├── cal_validate_linear.Rd ├── cal_validate_logistic.Rd ├── cal_validate_multinomial.Rd ├── cal_validate_none.Rd ├── class_pred.Rd ├── collect_metrics.cal_rset.Rd ├── collect_predictions.cal_rset.Rd ├── control_conformal_full.Rd ├── figures │ └── logo.png ├── inf_conformal-butcher.Rd ├── int_conformal_cv.Rd ├── int_conformal_full.Rd ├── int_conformal_quantile.Rd ├── int_conformal_split.Rd ├── is_class_pred.Rd ├── levels.class_pred.Rd ├── locate-equivocal.Rd ├── make_class_pred.Rd ├── predict.int_conformal_full.Rd ├── probably-package.Rd ├── reexports.Rd ├── reportable_rate.Rd ├── required_pkgs.cal_object.Rd ├── required_pkgs.int_conformal_cv.Rd ├── rmd │ └── parallel_intervals.Rmd ├── segment_naive_bayes.Rd ├── species_probs.Rd └── threshold_perf.Rd ├── probably.Rproj ├── revdep ├── .gitignore ├── README.md ├── cran.md ├── email.yml ├── failures.md └── problems.md ├── tests ├── testthat.R └── testthat │ ├── _snaps │ ├── bound_prediction.md │ ├── cal-estimate-beta.md │ ├── cal-estimate-isotonic.md │ ├── cal-estimate-linear.md │ ├── cal-estimate-logistic.md │ ├── cal-estimate-multinomial.md │ ├── cal-estimate-none.md │ ├── cal-plot-breaks.md │ ├── cal-plot-logistic.md │ ├── cal-plot-regression.md │ ├── cal-plot-windowed.md │ ├── cal-validate.md │ ├── class-pred.md │ ├── conformal_infer_cv.md │ ├── conformal_infer_full.md │ ├── conformal_infer_quantile.md │ ├── conformal_infer_split.md │ ├── make_class_pred.md │ └── threshold_perf.md │ ├── cal_files │ ├── binary_sim.rds │ ├── fit_rs.rds │ ├── multiclass_ames.rds │ ├── reg_sim.rds │ └── sim_multi.rds │ ├── helper-cal.R │ ├── test-bound_prediction.R │ ├── test-butcher.R │ ├── test-cal-apply-binary.R │ ├── test-cal-apply-multi.R │ ├── test-cal-apply-regression.R │ ├── test-cal-apply.R │ ├── test-cal-estimate-beta.R │ ├── test-cal-estimate-isotonic.R │ ├── test-cal-estimate-linear.R │ ├── test-cal-estimate-logistic.R │ ├── test-cal-estimate-multinomial.R │ 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