├── .gitignore ├── LICENSE ├── README.md ├── images ├── 2024-04-02_09-51-01_Screenshot 2024-04-02 at 09.50.59.png ├── 2024-04-02_09-51-23_Screenshot 2024-04-02 at 09.51.21.png ├── 2024-04-17_19-09-18_Screenshot 2024-04-17 at 19.09.14.png ├── 2024-04-18_19-42-50_Screenshot 2024-04-18 at 19.42.48.png ├── 2024-04-18_19-43-24_Screenshot 2024-04-18 at 19.43.20.png ├── 2024-04-22_13-54-25_Screenshot 2024-04-22 at 13.54.22.png └── 2024-04-22_13-55-34_Screenshot 2024-04-22 at 13.55.32.png ├── knn_sleepwalk_clip.gif ├── notebooks ├── biaxial_sleepwalk_back_gating.Rmd ├── biaxial_sleepwalk_test.Rmd ├── inverted_umap_test.Rmd ├── knn_sleepwalk_on_serial_dimr_runs.Rmd ├── knn_sleepwalk_umap_vs_original_space.Rmd ├── knn_sleepwalk_wrapper_testing.Rmd ├── knn_sleepwalk_wrapper_testing.nb.html ├── knn_sleepwalk_wrapper_testing_scrna_seq.Rmd └── make_small_dataset_for_package.Rmd ├── src └── knn_sleepwalk.R └── tsne_knn.png /.gitignore: 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