├── .gitignore ├── .travis.yml ├── AUTHORS ├── CHANGES ├── INSTALL ├── LICENSE ├── README.md ├── doc └── texinfo │ ├── Sakefile.yaml │ ├── deps.png │ ├── sake-doc.html │ ├── sake-doc.pdf │ └── sake-doc.texi ├── functests ├── test1 │ ├── Sakefile.yaml │ ├── convert.sh │ ├── dependencies.svg │ ├── dui-correlates.R │ ├── excel │ │ └── hold │ └── rawdata.txt ├── test2 │ ├── NOTE │ ├── Sakefile.yaml │ ├── dependencies.svg │ └── hold.txt └── test3 │ ├── Makefile │ ├── NOTE │ ├── Sakefile.yaml │ ├── config.yaml │ ├── deletethis │ ├── ensure_version_match.sh │ ├── functest.py │ ├── graphfuncs.c │ ├── include │ ├── graphfuncs.h │ ├── infuncs.h │ ├── qstats.h │ └── statfuncs.h │ ├── infuncs.c │ ├── pattern-sakefile.yaml │ ├── qstats.c │ ├── qstats.md │ ├── statfuncs.c │ ├── that.txt │ └── wildcard-Sakefile.yaml ├── sake ├── sakelib ├── __init__.py ├── acts.py ├── audit.py ├── build.py └── constants.py ├── setup.py ├── test_sake.py └── testlib ├── __init__.py ├── test_reqs.txt └── utobjs.py 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