├── LICENSE.md ├── README.md ├── dotPlotly_shiny ├── app.R └── dotPlotly_shiny.Rproj ├── example ├── Brapa_Bnapus.minimap2.paf ├── Brapa_Bnapus.minimap2.plot.html ├── Brapa_Bnapus.minimap2.plot.png ├── Brapa_Bnapus.nucmer.delta ├── Brapa_Bnapus.nucmer.delta.filter ├── Brapa_Bnapus.nucmer.delta.filter.coords ├── Brapa_Bnapus.nucmer.plot.html ├── Brapa_Bnapus.nucmer.plot.png └── README.md ├── mummerCoordsDotPlotly.R └── pafCoordsDotPlotly.R /LICENSE.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/LICENSE.md -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/README.md -------------------------------------------------------------------------------- /dotPlotly_shiny/app.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/dotPlotly_shiny/app.R -------------------------------------------------------------------------------- /dotPlotly_shiny/dotPlotly_shiny.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/dotPlotly_shiny/dotPlotly_shiny.Rproj -------------------------------------------------------------------------------- /example/Brapa_Bnapus.minimap2.paf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/example/Brapa_Bnapus.minimap2.paf -------------------------------------------------------------------------------- /example/Brapa_Bnapus.minimap2.plot.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/example/Brapa_Bnapus.minimap2.plot.html -------------------------------------------------------------------------------- /example/Brapa_Bnapus.minimap2.plot.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/example/Brapa_Bnapus.minimap2.plot.png -------------------------------------------------------------------------------- /example/Brapa_Bnapus.nucmer.delta: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/example/Brapa_Bnapus.nucmer.delta -------------------------------------------------------------------------------- /example/Brapa_Bnapus.nucmer.delta.filter: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/example/Brapa_Bnapus.nucmer.delta.filter -------------------------------------------------------------------------------- /example/Brapa_Bnapus.nucmer.delta.filter.coords: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/example/Brapa_Bnapus.nucmer.delta.filter.coords -------------------------------------------------------------------------------- /example/Brapa_Bnapus.nucmer.plot.html: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/example/Brapa_Bnapus.nucmer.plot.html -------------------------------------------------------------------------------- /example/Brapa_Bnapus.nucmer.plot.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/example/Brapa_Bnapus.nucmer.plot.png -------------------------------------------------------------------------------- /example/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/example/README.md -------------------------------------------------------------------------------- /mummerCoordsDotPlotly.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/mummerCoordsDotPlotly.R -------------------------------------------------------------------------------- /pafCoordsDotPlotly.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/tpoorten/dotPlotly/HEAD/pafCoordsDotPlotly.R --------------------------------------------------------------------------------