├── .gitignore ├── README.md ├── combo ├── .DS_Store ├── __init__.py ├── blm │ ├── __init__.py │ ├── basis │ │ ├── __init__.py │ │ └── fourier.py │ ├── core │ │ ├── __init__.py │ │ └── model.py │ ├── inf │ │ ├── __init__.py │ │ └── exact.py │ ├── lik │ │ ├── __init__.py │ │ ├── _src │ │ │ ├── __init__.py │ │ │ └── cov.py │ │ ├── gauss.py │ │ └── linear.py │ ├── predictor.py │ └── prior │ │ ├── __init__.py │ │ └── gauss.py ├── gp │ ├── __init__.py │ ├── core │ │ ├── __init__.py │ │ ├── learning.py │ │ ├── model.py │ │ └── prior.py │ ├── cov │ │ ├── __init__.py │ │ ├── _src │ │ │ ├── __init__.py │ │ │ ├── __init__.pyc │ │ │ ├── enhance_gauss.c │ │ │ └── enhance_gauss.pyx │ │ ├── gauss.py │ │ └── gauss.pyc │ ├── inf │ │ ├── __init__.py │ │ └── exact.py │ ├── lik │ │ ├── __init__.py │ │ └── gauss.py │ ├── mean │ │ ├── __init__.py │ │ ├── const.py │ │ └── zero.py │ └── predictor.py ├── misc │ ├── __init__.py │ ├── _src │ │ ├── __init__.py │ │ ├── cholupdate.c │ │ ├── cholupdate.pyx │ │ ├── diagAB.c │ │ ├── diagAB.pyx │ │ ├── logsumexp.c │ │ ├── logsumexp.pyx │ │ ├── traceAB.c │ │ └── traceAB.pyx │ ├── centering.py │ ├── gauss_elim.py │ └── set_config.py ├── opt │ ├── __init__.py │ └── adam.py ├── predictor.py ├── search │ ├── __init__.py │ ├── call_simulator.py │ ├── discrete │ │ ├── __init__.py │ │ ├── policy.py │ │ └── results.py │ ├── score.py │ └── utility.py └── variable.py ├── docs └── combo_document.pdf ├── examples └── grain_bound │ ├── .gitignore │ ├── .ipynb_checkpoints │ ├── describe_graph-checkpoint.ipynb │ ├── grain_boundary-checkpoint.ipynb │ └── tutorial-checkpoint.ipynb │ ├── tutorial.ipynb │ ├── tutorial_interactive_mode.ipynb │ └── tutorial_multi_probe.ipynb └── setup.py /.gitignore: -------------------------------------------------------------------------------- 1 | .DS_Store 2 | *~ 3 | build/ 4 | installed 5 | .pyc 6 | .ipynb_checkpoint 7 | -------------------------------------------------------------------------------- /README.md: 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