├── .circleci └── config.yml ├── .gitignore ├── CONTRIBUTING.rst ├── LICENSE.txt ├── MANIFEST.in ├── README.rst ├── docs ├── convert.md ├── data │ ├── cleanup.md │ ├── downloads.md │ ├── gene_attributes.md │ ├── gtex │ │ └── process_gtex.md │ └── parse_go.md ├── describe.md ├── gendocs.py ├── normalize.md └── search.md ├── examples └── example.ipynb ├── genemunge ├── __init__.py ├── convert.py ├── data │ ├── __init__.py │ ├── cleanup.py │ ├── downloads.py │ ├── gene_attributes.json │ ├── gene_attributes.py │ ├── go.json │ ├── gtex │ │ ├── __init__.py │ │ ├── gene_info.csv │ │ ├── process_gtex.py │ │ ├── recount.R │ │ └── tissue_stats.h5 │ ├── hgnc_complete_set.txt │ └── parse_go.py ├── describe.py ├── normalize.py └── search.py ├── setup.py └── tests └── genemunge ├── data └── test_parse_go.py ├── test_convert.py ├── test_describe.py ├── test_normalize.py └── test_search.py /.circleci/config.yml: -------------------------------------------------------------------------------- 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