├── README.md ├── VolViewer.nsi ├── VolViewer.sln ├── VolViewer ├── .gitattributes ├── .gitignore ├── Examples │ ├── example1.bat │ ├── example2.bat │ ├── example3.bat │ ├── example4.bat │ └── example5.bat ├── Icons │ ├── 3D.png │ ├── A_AND_B.png │ ├── A_DIFF_B.png │ ├── A_NOT_B.png │ ├── BB.png │ ├── B_NOT_A.png │ ├── FS.png │ ├── HQ.png │ ├── I.png │ ├── L.png │ ├── LQ.png │ ├── MQ.png │ ├── OME.png │ ├── VideoCamera.png │ ├── a.png │ ├── about.png │ ├── add.png │ ├── bg.png │ ├── big.psd │ ├── biooptonics_logo.png │ ├── blue.png │ ├── bookmarks.png │ ├── c.png │ ├── camera.png │ ├── config.png │ ├── crop.png │ ├── crop0.png │ ├── crop1.png │ ├── cut.png │ ├── empty.png │ ├── excel.png │ ├── facebuilder.png │ ├── fileopen.xpm │ ├── filesave.xpm │ ├── filter.png │ ├── fps.png │ ├── function.png │ ├── green.png │ ├── info.png │ ├── iso.png │ ├── labeller.png │ ├── light.png │ ├── lights.png │ ├── lineloop.png │ ├── lines.png │ ├── linesegment.png │ ├── load.png │ ├── logo.png │ ├── logo_start.png │ ├── magneticlines.png │ ├── mip.png │ ├── move.png │ ├── movie.png │ ├── movie2.png │ ├── mrct_logo.png │ ├── onoff.png │ ├── points.png │ ├── quality.png │ ├── rec.png │ ├── red.png │ ├── remove.png │ ├── ruler.png │ ├── s.png │ ├── save.png │ ├── scalebar.png │ ├── screenshot3.png │ ├── sectioncursor.png │ ├── sectioninvert.png │ ├── slice.png │ ├── small.psd │ ├── spanner.png │ ├── splash.png │ ├── surface.png │ ├── transfer.png │ ├── trianglesheet.png │ ├── view.png │ ├── zoomin.png │ ├── zoomout.png │ └── zoomreset.png ├── Kernels │ ├── anisotropic.cl │ ├── bilateral.cl │ ├── boundingbox.cl │ ├── dilate.cl │ ├── erode.cl │ ├── gaussian.cl │ ├── kernel_.cl │ ├── median.cl │ ├── median_shared.cl │ └── reduction.cl ├── Shaders │ ├── Copy of volume_allchannelsLAMBERTIAN.frag │ ├── Copy of volume_allchannelsLAMBERTIAN.vert │ ├── celshading.frag │ ├── celshading.vert │ ├── perfragment.frag │ ├── perfragment.vert │ ├── ssao.frag │ ├── ssao.vert │ ├── unsharp.frag │ ├── unsharp.vert │ ├── vol2d.frag │ ├── vol2d.vert │ ├── vol2dtrilin.frag │ ├── vol2dtrilin.vert │ ├── volume_allchannelsBLING-PHONG.frag │ ├── volume_allchannelsBLING-PHONG.vert │ ├── volume_allchannelsBLING-PHONG2SP.frag │ ├── volume_allchannelsBLING-PHONG2SP.vert │ ├── volume_allchannelsBLING-PHONG_CT.frag │ ├── volume_allchannelsBLING-PHONG_CT.vert │ ├── volume_allchannelsCLIP.frag │ ├── volume_allchannelsCLIP.vert │ ├── volume_allchannelsDEPTH.frag │ ├── volume_allchannelsDEPTH.vert │ ├── volume_allchannelsGOOCH.frag │ ├── volume_allchannelsGOOCH.vert │ ├── volume_allchannelsLAMBERTIAN.frag │ ├── volume_allchannelsLAMBERTIAN.vert │ ├── volume_allchannelsNOLIGHT.frag │ ├── volume_allchannelsNOLIGHT.vert │ ├── volume_allchannelsSEM.frag │ ├── volume_allchannelsSEM.vert │ ├── volume_allchannelsSINGPASS_NOLIGHT.frag │ ├── volume_allchannelsSINGPASS_NOLIGHT.vert │ ├── volume_allchannelsXRAY.frag │ ├── volume_allchannelsXRAY.vert │ ├── volume_sections.frag │ ├── volume_sections.vert │ ├── volume_singlechannelNOLIGHT.frag │ ├── volume_singlechannelNOLIGHT.vert │ ├── xray.frag │ └── xray.vert ├── VolViewer.qrc ├── VolViewer.vcproj ├── VolViewer.vcxproj ├── VolViewer.vcxproj.filters ├── settings.ini └── src │ ├── ArcBall.cpp │ ├── ArcBall.h │ ├── BSpline.cpp │ ├── BSpline.h │ ├── CVector.cpp │ ├── CVector.h │ ├── Camera.cpp │ ├── Camera.h │ ├── ColourFun.cpp │ ├── ColourFun.h │ ├── ColourMap.cpp │ ├── ColourMap.h │ ├── Constant.h │ ├── DatasetView.cpp │ ├── DatasetView.h │ ├── Edge.h │ ├── Face.cpp │ ├── Face.h │ ├── Filter.cpp │ ├── Filter.h │ ├── FilterDefinitions.h │ ├── Floodfill.cpp │ ├── Floodfill.h │ ├── FunctionEditor.cpp │ ├── FunctionEditor.h │ ├── GL_Ext.cpp │ ├── GL_Ext.h │ ├── GL_FrameBufferObject.cpp │ ├── GL_FrameBufferObject.h │ ├── GL_ShaderObj.cpp │ ├── GL_ShaderObj.h │ ├── Gaussian.cpp │ ├── Gaussian.h │ ├── Global.cpp │ ├── Global.h │ ├── LICENSE.txt │ ├── LICENSE.url.URL │ ├── Main.cpp │ ├── MarchingCubes.cpp │ ├── MarchingCubes.h │ ├── MarchingCubesLookupTab.h │ ├── Matrix.cpp │ ├── Matrix.h │ ├── Matrix4x4.cpp │ ├── Matrix4x4.h │ ├── MaxFlowSegmentation.cpp │ ├── MaxFlowSegmentation.h │ ├── MeasureDefinitions.h │ ├── MeasureListObject.cpp │ ├── MeasureListObject.h │ ├── MeasureObject.cpp │ ├── MeasureObject.h │ ├── Mesh.cpp │ ├── Mesh.h │ ├── MeshListObject.cpp │ ├── MeshListObject.h │ ├── MyDefines.h │ ├── MyMath.cpp │ ├── MyMath.h │ ├── OMEROLoader.cpp │ ├── OMEROLoader.h │ ├── OpenCLExecuter.cpp │ ├── OpenCLExecuter.h │ ├── OpenCLWrapper.cpp │ ├── OpenCLWrapper.h │ ├── PCA.cpp │ ├── PCA.h │ ├── PeronaMalikFlow.cpp │ ├── PeronaMalikFlow.h │ ├── PlaneWidget.cpp │ ├── PlaneWidget.h │ ├── PlaneWidgetInCube.cpp │ ├── PlaneWidgetInCube.h │ ├── Point3D.h │ ├── QtCLippingWidget.cpp │ ├── QtCLippingWidget.h │ ├── QtCameraEditorDialogue.cpp │ ├── QtCameraEditorDialogue.h │ ├── QtCameraSettingsWidget.cpp │ ├── QtCameraSettingsWidget.h │ ├── QtClippingEditorDialogue.cpp │ ├── QtClippingEditorDialogue.h │ ├── QtCropEditorDialogue.cpp │ ├── QtCropEditorDialogue.h │ ├── QtCropWidget.cpp │ ├── QtCropWidget.h │ ├── QtDatasetViewDialogue.cpp │ ├── QtDatasetViewDialogue.h │ ├── QtDatasetViewWidget.cpp │ ├── QtDatasetViewWidget.h │ ├── QtFilterEditorDialogue.cpp │ ├── QtFilterEditorDialogue.h │ ├── QtFilterWidget.cpp │ ├── QtFilterWidget.h │ ├── QtGLObjWin.cpp │ ├── QtGLObjWin.h │ ├── QtGLWidget.cpp │ ├── QtGLWidget.h │ ├── QtHistoTfuncPixmap.cpp │ ├── QtHistoTfuncPixmap.h │ ├── QtHistogram.cpp │ ├── QtHistogram.h │ ├── QtIsoSurfaceWidget.cpp │ ├── QtIsoSurfaceWidget.h │ ├── QtLightEditorDialogue.cpp │ ├── QtLightEditorDialogue.h │ ├── QtLightSettingsWidget.cpp │ ├── QtLightSettingsWidget.h │ ├── QtMainWindow.cpp │ ├── QtMainWindow.h │ ├── QtMeasuringEditorDialogue.cpp │ ├── QtMeasuringEditorDialogue.h │ ├── QtMeasuringWidget.cpp │ ├── QtMeasuringWidget.h │ ├── QtMovieEditorDialogue.cpp │ ├── QtMovieEditorDialogue.h │ ├── QtMoviePlayer.cpp │ ├── QtMoviePlayer.h │ ├── QtMovieSettingsWidget.cpp │ ├── QtMovieSettingsWidget.h │ ├── QtOMEROLoader.cpp │ ├── QtOMEROLoader.h │ ├── QtRenderSettingsWidget.cpp │ ├── QtRenderSettingsWidget.h │ ├── QtRenderViewDialogue.cpp │ ├── QtRenderViewDialogue.h │ ├── QtRenderViewWidget.cpp │ ├── QtRenderViewWidget.h │ ├── QtSliceFrame.cpp │ ├── QtSliceFrame.h │ ├── QtSplashScreen.cpp │ ├── QtSplashScreen.h │ ├── QtStereoEditorDialogue.cpp │ ├── QtStereoEditorDialogue.h │ ├── QtStereoSettingsWidget.cpp │ ├── QtStereoSettingsWidget.h │ ├── QtThreadedBrickLoader.cpp │ ├── QtThreadedBrickLoader.h │ ├── QtThreadedSliceLoader.cpp │ ├── QtThreadedSliceLoader.h │ ├── QtTransferFuncDialogue.cpp │ ├── QtTransferFuncDialogue.h │ ├── QtTransferFuncWidget.cpp │ ├── QtTransferFuncWidget.h │ ├── QtTransferFunctionEditorDialogue.cpp │ ├── QtTransferFunctionEditorDialogue.h │ ├── QtTransferFunctionWidget.cpp │ ├── QtTransferFunctionWidget.h │ ├── QtTransformEditorDialogue.cpp │ ├── QtTransformEditorDialogue.h │ ├── QtTransformWidget.cpp │ ├── QtTransformWidget.h │ ├── QtViewEditorDialogue.cpp │ ├── QtViewEditorDialogue.h │ ├── QtViewSettingsWidget.cpp │ ├── QtViewSettingsWidget.h │ ├── QtVolumeEditorDialogue.cpp │ ├── QtVolumeEditorDialogue.h │ ├── Quaternion.cpp │ ├── Quaternion.h │ ├── RAW.cpp │ ├── RAW.h │ ├── SVNObject.cpp │ ├── SVNObject.h │ ├── ShaderDefinitions.h │ ├── Sieve.cpp │ ├── Sieve.h │ ├── Sobel.cpp │ ├── Sobel.h │ ├── TfuncState.cpp │ ├── TfuncState.h │ ├── Timer.cpp │ ├── Timer.h │ ├── Tokenizer.cpp │ ├── Tokenizer.h │ ├── Triangulate.cpp │ ├── Triangulate.h │ ├── Vector.cpp │ ├── Vector.h │ ├── VolIO.cpp │ ├── VolIO.h │ ├── VolViewer.ico │ ├── VolViewer.rc │ ├── VolViewer.res │ ├── VolumeObject.cpp │ ├── VolumeObject.h │ ├── VolumeRender.cpp │ ├── VolumeRender.h │ ├── VolumeRenderView.cpp │ ├── VolumeRenderView.h │ ├── VolumeScript.cpp │ ├── VolumeScript.h │ ├── build_linux.sh │ ├── build_mac.sh │ ├── build_win.bat │ ├── gl.h │ ├── glext.h │ ├── libtiff │ ├── src │ │ └── tiff-3.9.5.zip │ ├── t4.h │ ├── tif_config.h │ ├── 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