├── LICENSE ├── README.md ├── bin └── tadtool ├── docs ├── images │ ├── buttons.png │ ├── data.png │ ├── hic.png │ ├── line.png │ └── tadtool.png └── tadtool_methods.pdf ├── examples ├── chr12_20-35Mb.matrix.txt ├── chr12_20-35Mb.matrix_sparse.txt ├── chr12_20-35Mb_regions.bed ├── chr12_20-35Mb_regions_chrDiff.bed └── chr12_plot.py ├── setup.cfg ├── setup.py └── tadtool ├── __init__.py ├── plot.py ├── tad.py └── version.py /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vaquerizaslab/tadtool/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vaquerizaslab/tadtool/HEAD/README.md -------------------------------------------------------------------------------- /bin/tadtool: 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