├── .gitignore ├── README.md ├── algorithms ├── BigAlign │ ├── BigAlign.py │ ├── UniAlign.m │ ├── __init__.py │ └── flickr-myspace.mat ├── CENALP │ ├── CENALP.py │ ├── __init__.py │ ├── embedding_model.py │ ├── loss.py │ └── tempCodeRunnerFile.py ├── DeepLink │ ├── DeepLink.py │ ├── __init__.py │ ├── embedding_model.py │ └── mapping_model.py ├── FINAL │ ├── FINAL.py │ └── __init__.py ├── GAlign │ ├── GAlign.py │ ├── __init__.py │ ├── embedding_model.py │ ├── losses.py │ └── utils.py ├── IONE │ ├── IONE.iml │ ├── IONE.py │ ├── __init__.py │ └── src │ │ ├── FinalModel │ │ ├── INE.java │ │ ├── INEUpdate.java │ │ ├── IONE.java │ │ ├── IONES.java │ │ ├── IONESUpdate.java │ │ ├── IONEUpdate.java │ │ ├── getPrecision.java │ │ └── user_sim.java │ │ ├── IONE.jar │ │ ├── META-INF │ │ └── MANIFEST.MF │ │ ├── ModelWith2OrderNorm │ │ ├── BasicUnit.java │ │ ├── MyCompare.java │ │ ├── MyCompare_set.java │ │ └── SimilarityUtil.java │ │ └── StaticVar │ │ └── Vars.java ├── IsoRank │ ├── IsoRank.py │ ├── __init__.py │ └── test.sh ├── NAWAL │ ├── NAWAL.py │ ├── __init__.py │ ├── embedding_model.py │ ├── loss.py │ ├── mapping_models.py │ └── utils.py ├── PALE │ ├── __init__.py │ ├── embedding_model.py │ ├── loss.py │ ├── mapping_model.py │ └── pale.py ├── REGAL │ ├── README.md │ ├── REGAL.py │ ├── __init__.py │ ├── alignments.py │ ├── alignments.pyc │ ├── models.py │ ├── xnetmf.py │ └── xnetmf.pyc ├── __init__.py ├── map_architechtures.py └── network_alignment_model.py ├── evaluation ├── __init__.py ├── evaluate_distance.py ├── evaluate_graph_reconstruction.py ├── evaluate_link_prediction.py ├── evaluate_node_classification.py ├── matcher.py └── metrics.py ├── generate_dataset ├── fully_synthetic.py └── semi_synthetic.py ├── graph_data ├── allmv_tmdb │ ├── allmv │ │ └── graphsage │ │ │ ├── G.json │ │ │ ├── edges.edgelist.npy │ │ │ ├── feats.npy │ │ │ └── id2idx.json │ ├── dictionaries │ │ ├── groundtruth │ │ ├── node,split=0.1.test.dict │ │ ├── node,split=0.1.train.dict │ │ ├── node,split=0.2.test.dict │ │ └── node,split=0.2.train.dict │ ├── make_example_graph.py │ └── tmdb │ │ └── graphsage │ │ ├── G.json │ │ ├── edges.edgelist.npy │ │ ├── feats.npy │ │ └── id2idx.json └── douban │ ├── dictionaries │ ├── groundtruth │ ├── node,split=0.01.test.dict │ ├── node,split=0.01.train.dict │ ├── node,split=0.03.test.dict │ ├── node,split=0.03.train.dict │ ├── node,split=0.1.test.dict │ ├── node,split=0.1.train.dict │ ├── node,split=0.2.test.dict │ ├── node,split=0.2.train.dict │ ├── node,split=0.4.test.dict │ ├── node,split=0.4.train.dict │ ├── node,split=0.8.test.dict │ └── node,split=0.8.train.dict │ ├── offline │ ├── dictionaries │ │ ├── node,split=0.2.full.dict │ │ ├── node,split=0.2.test.dict │ │ ├── node,split=0.2.train.dict │ │ ├── node,split=0.8.full.dict │ │ ├── node,split=0.8.test.dict │ │ └── node,split=0.8.train.dict │ ├── edgelist │ │ ├── edgelist │ │ └── offline.edgelist │ └── graphsage │ │ ├── G.json │ │ ├── edge_feats.mat │ │ ├── edges.edgelist.npy │ │ ├── feats.npy │ │ └── id2idx.json │ └── online │ ├── dictionaries │ ├── node,split=0.2.full.dict │ ├── node,split=0.2.test.dict │ ├── node,split=0.2.train.dict │ ├── node,split=0.8.full.dict │ ├── node,split=0.8.test.dict │ └── node,split=0.8.train.dict │ ├── edgelist │ ├── edgelist │ └── online.edgelist │ └── graphsage │ ├── G.json │ ├── edge_feats.mat │ ├── edges.edgelist.npy │ ├── feats.npy │ └── id2idx.json ├── input ├── .semi_synthetic.py.swp ├── data_preprocess.py ├── dataset.py ├── fully_synthetic.py └── semi_synthetic.py ├── label.csv ├── network_alignment.py ├── scripts ├── UIL.sh ├── bigalign.sh ├── bigalign │ ├── components.sh │ ├── fully.sh │ ├── ppi_changefeats.sh │ ├── ppi_delnodes.sh │ ├── randomclone.sh │ ├── realdata.sh │ ├── seed.sh │ ├── seeds_k.sh │ ├── seeds_range.sh │ ├── semi.sh │ ├── smallworld-connectivity.sh │ ├── smallworld-density.sh │ ├── smallworld.sh │ ├── smallworld2.sh │ └── time.sh ├── cenalp.sh ├── deeplink │ ├── components.sh │ ├── smallworld-density.sh │ └── time.sh ├── fagcn │ ├── douban.sh │ └── ppi.sh ├── final │ ├── components.sh │ ├── fully.sh │ ├── ppi_changefeats.sh │ ├── ppi_delnodes.sh │ ├── randomclone.sh │ ├── realdata.sh │ ├── seed.sh │ ├── seeds_k.sh │ ├── seeds_range.sh │ ├── semi.sh │ ├── smallworld-connectivity.sh │ ├── smallworld-density.sh │ ├── smallworld.sh │ ├── smallworld2.sh │ └── time.sh ├── ione.sh ├── ione │ ├── components.sh │ ├── fully.sh │ ├── ppi_changefeats.sh │ ├── ppi_delnodes.sh │ ├── randomclone.sh │ ├── realdata.sh │ ├── seed.sh │ ├── seeds_k.sh │ ├── seeds_range.sh │ ├── semi.sh │ ├── smallworld-connectivity.sh │ ├── smallworld-density.sh │ ├── smallworld.sh │ ├── smallworld2.sh │ └── time.sh ├── isorank │ ├── components.sh │ ├── fully.sh │ ├── ppi_changefeats.sh │ ├── ppi_delnodes.sh │ ├── randomclone.sh │ ├── realdata.sh │ ├── seed.sh │ ├── seeds_k.sh │ ├── seeds_range.sh │ ├── semi.sh │ ├── smallworld-connectivity.sh │ ├── smallworld-density.sh │ ├── smallworld.sh │ ├── smallworld2.sh │ └── time.sh ├── latest_FAGCN.sh ├── nawal.sh ├── pale │ ├── components.sh │ ├── smallworld-density.sh │ └── time.sh ├── pale_muse.sh ├── regal.sh ├── regal │ ├── components.sh │ ├── smallworld-density.sh │ └── time.sh ├── regal_real.sh ├── sample_atoan.txt ├── sample_atoan.txt.sh ├── sample_script.sh ├── shuffle_semi.sh ├── split_dict.sh ├── time.sh ├── time2.sh └── uil_sample.sh └── utils ├── 3d_visualization_tool.ipynb ├── connected_components.py ├── count_node_same_features.py ├── create_features.py ├── create_prior_matrix_H.py ├── edgelist_to_graphsage.py ├── extract_data_from_graph.py ├── feature_groundtruth_checking.py ├── feature_statistics.py ├── filter_dataset_by_dict.py ├── filter_graph_by_degree.py ├── fix_features.py ├── gen_and_visual_graph.py ├── gen_dict.py ├── generate_groundtruth.py ├── get_sub_graph.py ├── graph_utils.py ├── graphsage_to_edgelist.py ├── graphsage_to_mat.py ├── mat_to_graphsage.py ├── merge_graphs.py ├── pale_facebook_preprocess.py ├── pale_random_clone.py ├── random_clone.py ├── random_clone_add.py ├── random_clone_delete.py ├── random_delete_nodes.py ├── read_embedding.py ├── regal_network_creator.py ├── shuffle_graph.py ├── shuffle_graph_old.py ├── sig_to_graphsage.py ├── split_dict.py ├── split_embeddings.py ├── synthetic_graph.py └── tsne.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/.gitignore -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/README.md -------------------------------------------------------------------------------- /algorithms/BigAlign/BigAlign.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/BigAlign/BigAlign.py -------------------------------------------------------------------------------- /algorithms/BigAlign/UniAlign.m: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/BigAlign/UniAlign.m -------------------------------------------------------------------------------- /algorithms/BigAlign/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/BigAlign/__init__.py -------------------------------------------------------------------------------- /algorithms/BigAlign/flickr-myspace.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/BigAlign/flickr-myspace.mat -------------------------------------------------------------------------------- /algorithms/CENALP/CENALP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/CENALP/CENALP.py -------------------------------------------------------------------------------- /algorithms/CENALP/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/CENALP/__init__.py -------------------------------------------------------------------------------- /algorithms/CENALP/embedding_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/CENALP/embedding_model.py -------------------------------------------------------------------------------- /algorithms/CENALP/loss.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/CENALP/loss.py -------------------------------------------------------------------------------- /algorithms/CENALP/tempCodeRunnerFile.py: -------------------------------------------------------------------------------- 1 | learn_embeddings -------------------------------------------------------------------------------- /algorithms/DeepLink/DeepLink.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/DeepLink/DeepLink.py -------------------------------------------------------------------------------- /algorithms/DeepLink/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/DeepLink/__init__.py -------------------------------------------------------------------------------- /algorithms/DeepLink/embedding_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/DeepLink/embedding_model.py -------------------------------------------------------------------------------- /algorithms/DeepLink/mapping_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/DeepLink/mapping_model.py -------------------------------------------------------------------------------- /algorithms/FINAL/FINAL.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/FINAL/FINAL.py -------------------------------------------------------------------------------- /algorithms/FINAL/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/FINAL/__init__.py -------------------------------------------------------------------------------- /algorithms/GAlign/GAlign.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/GAlign/GAlign.py -------------------------------------------------------------------------------- /algorithms/GAlign/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/GAlign/__init__.py -------------------------------------------------------------------------------- /algorithms/GAlign/embedding_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/GAlign/embedding_model.py -------------------------------------------------------------------------------- /algorithms/GAlign/losses.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/GAlign/losses.py -------------------------------------------------------------------------------- /algorithms/GAlign/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/GAlign/utils.py -------------------------------------------------------------------------------- /algorithms/IONE/IONE.iml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/IONE.iml -------------------------------------------------------------------------------- /algorithms/IONE/IONE.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/IONE.py -------------------------------------------------------------------------------- /algorithms/IONE/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/__init__.py -------------------------------------------------------------------------------- /algorithms/IONE/src/FinalModel/INE.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/FinalModel/INE.java -------------------------------------------------------------------------------- /algorithms/IONE/src/FinalModel/INEUpdate.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/FinalModel/INEUpdate.java -------------------------------------------------------------------------------- /algorithms/IONE/src/FinalModel/IONE.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/FinalModel/IONE.java -------------------------------------------------------------------------------- /algorithms/IONE/src/FinalModel/IONES.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/FinalModel/IONES.java -------------------------------------------------------------------------------- /algorithms/IONE/src/FinalModel/IONESUpdate.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/FinalModel/IONESUpdate.java -------------------------------------------------------------------------------- /algorithms/IONE/src/FinalModel/IONEUpdate.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/FinalModel/IONEUpdate.java -------------------------------------------------------------------------------- /algorithms/IONE/src/FinalModel/getPrecision.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/FinalModel/getPrecision.java -------------------------------------------------------------------------------- /algorithms/IONE/src/FinalModel/user_sim.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/FinalModel/user_sim.java -------------------------------------------------------------------------------- /algorithms/IONE/src/IONE.jar: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/IONE.jar -------------------------------------------------------------------------------- /algorithms/IONE/src/META-INF/MANIFEST.MF: -------------------------------------------------------------------------------- 1 | Manifest-Version: 1.0 2 | Main-Class: FinalModel.IONE 3 | -------------------------------------------------------------------------------- /algorithms/IONE/src/ModelWith2OrderNorm/BasicUnit.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/ModelWith2OrderNorm/BasicUnit.java -------------------------------------------------------------------------------- /algorithms/IONE/src/ModelWith2OrderNorm/MyCompare.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/ModelWith2OrderNorm/MyCompare.java -------------------------------------------------------------------------------- /algorithms/IONE/src/ModelWith2OrderNorm/MyCompare_set.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/ModelWith2OrderNorm/MyCompare_set.java -------------------------------------------------------------------------------- /algorithms/IONE/src/ModelWith2OrderNorm/SimilarityUtil.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/ModelWith2OrderNorm/SimilarityUtil.java -------------------------------------------------------------------------------- /algorithms/IONE/src/StaticVar/Vars.java: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IONE/src/StaticVar/Vars.java -------------------------------------------------------------------------------- /algorithms/IsoRank/IsoRank.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IsoRank/IsoRank.py -------------------------------------------------------------------------------- /algorithms/IsoRank/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IsoRank/__init__.py -------------------------------------------------------------------------------- /algorithms/IsoRank/test.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/IsoRank/test.sh -------------------------------------------------------------------------------- /algorithms/NAWAL/NAWAL.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/NAWAL/NAWAL.py -------------------------------------------------------------------------------- /algorithms/NAWAL/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/NAWAL/__init__.py -------------------------------------------------------------------------------- /algorithms/NAWAL/embedding_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/NAWAL/embedding_model.py -------------------------------------------------------------------------------- /algorithms/NAWAL/loss.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/NAWAL/loss.py -------------------------------------------------------------------------------- /algorithms/NAWAL/mapping_models.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/NAWAL/mapping_models.py -------------------------------------------------------------------------------- /algorithms/NAWAL/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/NAWAL/utils.py -------------------------------------------------------------------------------- /algorithms/PALE/__init__.py: -------------------------------------------------------------------------------- 1 | from algorithms.PALE.pale import PALE -------------------------------------------------------------------------------- /algorithms/PALE/embedding_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/PALE/embedding_model.py -------------------------------------------------------------------------------- /algorithms/PALE/loss.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/PALE/loss.py -------------------------------------------------------------------------------- /algorithms/PALE/mapping_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/PALE/mapping_model.py -------------------------------------------------------------------------------- /algorithms/PALE/pale.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/PALE/pale.py -------------------------------------------------------------------------------- /algorithms/REGAL/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/REGAL/README.md -------------------------------------------------------------------------------- /algorithms/REGAL/REGAL.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/REGAL/REGAL.py -------------------------------------------------------------------------------- /algorithms/REGAL/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/REGAL/__init__.py -------------------------------------------------------------------------------- /algorithms/REGAL/alignments.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/REGAL/alignments.py -------------------------------------------------------------------------------- /algorithms/REGAL/alignments.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/REGAL/alignments.pyc -------------------------------------------------------------------------------- /algorithms/REGAL/models.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/REGAL/models.py -------------------------------------------------------------------------------- /algorithms/REGAL/xnetmf.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/REGAL/xnetmf.py -------------------------------------------------------------------------------- /algorithms/REGAL/xnetmf.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/REGAL/xnetmf.pyc -------------------------------------------------------------------------------- /algorithms/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/__init__.py -------------------------------------------------------------------------------- /algorithms/map_architechtures.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/map_architechtures.py -------------------------------------------------------------------------------- /algorithms/network_alignment_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/algorithms/network_alignment_model.py -------------------------------------------------------------------------------- /evaluation/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /evaluation/evaluate_distance.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/evaluation/evaluate_distance.py -------------------------------------------------------------------------------- /evaluation/evaluate_graph_reconstruction.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/evaluation/evaluate_graph_reconstruction.py -------------------------------------------------------------------------------- /evaluation/evaluate_link_prediction.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/evaluation/evaluate_link_prediction.py -------------------------------------------------------------------------------- /evaluation/evaluate_node_classification.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/evaluation/evaluate_node_classification.py -------------------------------------------------------------------------------- /evaluation/matcher.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/evaluation/matcher.py -------------------------------------------------------------------------------- /evaluation/metrics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/evaluation/metrics.py -------------------------------------------------------------------------------- /generate_dataset/fully_synthetic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/generate_dataset/fully_synthetic.py -------------------------------------------------------------------------------- /generate_dataset/semi_synthetic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/generate_dataset/semi_synthetic.py -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/allmv/graphsage/G.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/allmv/graphsage/G.json -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/allmv/graphsage/edges.edgelist.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/allmv/graphsage/edges.edgelist.npy -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/allmv/graphsage/feats.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/allmv/graphsage/feats.npy -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/allmv/graphsage/id2idx.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/allmv/graphsage/id2idx.json -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/dictionaries/groundtruth: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/dictionaries/groundtruth -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/dictionaries/node,split=0.1.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/dictionaries/node,split=0.1.test.dict -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/dictionaries/node,split=0.1.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/dictionaries/node,split=0.1.train.dict -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/dictionaries/node,split=0.2.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/dictionaries/node,split=0.2.test.dict -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/dictionaries/node,split=0.2.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/dictionaries/node,split=0.2.train.dict -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/make_example_graph.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/tmdb/graphsage/G.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/tmdb/graphsage/G.json -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/tmdb/graphsage/edges.edgelist.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/tmdb/graphsage/edges.edgelist.npy -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/tmdb/graphsage/feats.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/tmdb/graphsage/feats.npy -------------------------------------------------------------------------------- /graph_data/allmv_tmdb/tmdb/graphsage/id2idx.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/allmv_tmdb/tmdb/graphsage/id2idx.json -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/groundtruth: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/groundtruth -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.01.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.01.test.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.01.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.01.train.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.03.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.03.test.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.03.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.03.train.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.1.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.1.test.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.1.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.1.train.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.2.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.2.test.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.2.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.2.train.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.4.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.4.test.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.4.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.4.train.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.8.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.8.test.dict -------------------------------------------------------------------------------- /graph_data/douban/dictionaries/node,split=0.8.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/dictionaries/node,split=0.8.train.dict -------------------------------------------------------------------------------- /graph_data/douban/offline/dictionaries/node,split=0.2.full.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/dictionaries/node,split=0.2.full.dict -------------------------------------------------------------------------------- /graph_data/douban/offline/dictionaries/node,split=0.2.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/dictionaries/node,split=0.2.test.dict -------------------------------------------------------------------------------- /graph_data/douban/offline/dictionaries/node,split=0.2.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/dictionaries/node,split=0.2.train.dict -------------------------------------------------------------------------------- /graph_data/douban/offline/dictionaries/node,split=0.8.full.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/dictionaries/node,split=0.8.full.dict -------------------------------------------------------------------------------- /graph_data/douban/offline/dictionaries/node,split=0.8.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/dictionaries/node,split=0.8.test.dict -------------------------------------------------------------------------------- /graph_data/douban/offline/dictionaries/node,split=0.8.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/dictionaries/node,split=0.8.train.dict -------------------------------------------------------------------------------- /graph_data/douban/offline/edgelist/edgelist: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/edgelist/edgelist -------------------------------------------------------------------------------- /graph_data/douban/offline/edgelist/offline.edgelist: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/edgelist/offline.edgelist -------------------------------------------------------------------------------- /graph_data/douban/offline/graphsage/G.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/graphsage/G.json -------------------------------------------------------------------------------- /graph_data/douban/offline/graphsage/edge_feats.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/graphsage/edge_feats.mat -------------------------------------------------------------------------------- /graph_data/douban/offline/graphsage/edges.edgelist.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/graphsage/edges.edgelist.npy -------------------------------------------------------------------------------- /graph_data/douban/offline/graphsage/feats.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/graphsage/feats.npy -------------------------------------------------------------------------------- /graph_data/douban/offline/graphsage/id2idx.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/offline/graphsage/id2idx.json -------------------------------------------------------------------------------- /graph_data/douban/online/dictionaries/node,split=0.2.full.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/dictionaries/node,split=0.2.full.dict -------------------------------------------------------------------------------- /graph_data/douban/online/dictionaries/node,split=0.2.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/dictionaries/node,split=0.2.test.dict -------------------------------------------------------------------------------- /graph_data/douban/online/dictionaries/node,split=0.2.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/dictionaries/node,split=0.2.train.dict -------------------------------------------------------------------------------- /graph_data/douban/online/dictionaries/node,split=0.8.full.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/dictionaries/node,split=0.8.full.dict -------------------------------------------------------------------------------- /graph_data/douban/online/dictionaries/node,split=0.8.test.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/dictionaries/node,split=0.8.test.dict -------------------------------------------------------------------------------- /graph_data/douban/online/dictionaries/node,split=0.8.train.dict: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/dictionaries/node,split=0.8.train.dict -------------------------------------------------------------------------------- /graph_data/douban/online/edgelist/edgelist: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/edgelist/edgelist -------------------------------------------------------------------------------- /graph_data/douban/online/edgelist/online.edgelist: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/edgelist/online.edgelist -------------------------------------------------------------------------------- /graph_data/douban/online/graphsage/G.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/graphsage/G.json -------------------------------------------------------------------------------- /graph_data/douban/online/graphsage/edge_feats.mat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/graphsage/edge_feats.mat -------------------------------------------------------------------------------- /graph_data/douban/online/graphsage/edges.edgelist.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/graphsage/edges.edgelist.npy -------------------------------------------------------------------------------- /graph_data/douban/online/graphsage/feats.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/graphsage/feats.npy -------------------------------------------------------------------------------- /graph_data/douban/online/graphsage/id2idx.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/graph_data/douban/online/graphsage/id2idx.json -------------------------------------------------------------------------------- /input/.semi_synthetic.py.swp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/input/.semi_synthetic.py.swp -------------------------------------------------------------------------------- /input/data_preprocess.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/input/data_preprocess.py -------------------------------------------------------------------------------- /input/dataset.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/input/dataset.py -------------------------------------------------------------------------------- /input/fully_synthetic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/input/fully_synthetic.py -------------------------------------------------------------------------------- /input/semi_synthetic.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/input/semi_synthetic.py -------------------------------------------------------------------------------- /label.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/label.csv -------------------------------------------------------------------------------- /network_alignment.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/network_alignment.py -------------------------------------------------------------------------------- /scripts/UIL.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/UIL.sh -------------------------------------------------------------------------------- /scripts/bigalign.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign.sh -------------------------------------------------------------------------------- /scripts/bigalign/components.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/components.sh -------------------------------------------------------------------------------- /scripts/bigalign/fully.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/fully.sh -------------------------------------------------------------------------------- /scripts/bigalign/ppi_changefeats.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/ppi_changefeats.sh -------------------------------------------------------------------------------- /scripts/bigalign/ppi_delnodes.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/ppi_delnodes.sh -------------------------------------------------------------------------------- /scripts/bigalign/randomclone.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/randomclone.sh -------------------------------------------------------------------------------- /scripts/bigalign/realdata.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/realdata.sh -------------------------------------------------------------------------------- /scripts/bigalign/seed.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/seed.sh -------------------------------------------------------------------------------- /scripts/bigalign/seeds_k.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/seeds_k.sh -------------------------------------------------------------------------------- /scripts/bigalign/seeds_range.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/seeds_range.sh -------------------------------------------------------------------------------- /scripts/bigalign/semi.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/semi.sh -------------------------------------------------------------------------------- /scripts/bigalign/smallworld-connectivity.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/smallworld-connectivity.sh -------------------------------------------------------------------------------- /scripts/bigalign/smallworld-density.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/smallworld-density.sh -------------------------------------------------------------------------------- /scripts/bigalign/smallworld.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/smallworld.sh -------------------------------------------------------------------------------- /scripts/bigalign/smallworld2.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/smallworld2.sh -------------------------------------------------------------------------------- /scripts/bigalign/time.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/bigalign/time.sh -------------------------------------------------------------------------------- /scripts/cenalp.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/cenalp.sh -------------------------------------------------------------------------------- /scripts/deeplink/components.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/deeplink/components.sh -------------------------------------------------------------------------------- /scripts/deeplink/smallworld-density.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/deeplink/smallworld-density.sh -------------------------------------------------------------------------------- /scripts/deeplink/time.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/deeplink/time.sh -------------------------------------------------------------------------------- /scripts/fagcn/douban.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/fagcn/douban.sh -------------------------------------------------------------------------------- /scripts/fagcn/ppi.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/fagcn/ppi.sh -------------------------------------------------------------------------------- /scripts/final/components.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/components.sh -------------------------------------------------------------------------------- /scripts/final/fully.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/fully.sh -------------------------------------------------------------------------------- /scripts/final/ppi_changefeats.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/ppi_changefeats.sh -------------------------------------------------------------------------------- /scripts/final/ppi_delnodes.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/ppi_delnodes.sh -------------------------------------------------------------------------------- /scripts/final/randomclone.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/randomclone.sh -------------------------------------------------------------------------------- /scripts/final/realdata.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/realdata.sh -------------------------------------------------------------------------------- /scripts/final/seed.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/seed.sh -------------------------------------------------------------------------------- /scripts/final/seeds_k.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/seeds_k.sh -------------------------------------------------------------------------------- /scripts/final/seeds_range.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/seeds_range.sh -------------------------------------------------------------------------------- /scripts/final/semi.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/semi.sh -------------------------------------------------------------------------------- /scripts/final/smallworld-connectivity.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/smallworld-connectivity.sh -------------------------------------------------------------------------------- /scripts/final/smallworld-density.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/smallworld-density.sh -------------------------------------------------------------------------------- /scripts/final/smallworld.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/smallworld.sh -------------------------------------------------------------------------------- /scripts/final/smallworld2.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/smallworld2.sh -------------------------------------------------------------------------------- /scripts/final/time.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/final/time.sh -------------------------------------------------------------------------------- /scripts/ione.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione.sh -------------------------------------------------------------------------------- /scripts/ione/components.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/components.sh -------------------------------------------------------------------------------- /scripts/ione/fully.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/fully.sh -------------------------------------------------------------------------------- /scripts/ione/ppi_changefeats.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/ppi_changefeats.sh -------------------------------------------------------------------------------- /scripts/ione/ppi_delnodes.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/ppi_delnodes.sh -------------------------------------------------------------------------------- /scripts/ione/randomclone.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/randomclone.sh -------------------------------------------------------------------------------- /scripts/ione/realdata.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/realdata.sh -------------------------------------------------------------------------------- /scripts/ione/seed.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/seed.sh -------------------------------------------------------------------------------- /scripts/ione/seeds_k.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/seeds_k.sh -------------------------------------------------------------------------------- /scripts/ione/seeds_range.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/seeds_range.sh -------------------------------------------------------------------------------- /scripts/ione/semi.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/semi.sh -------------------------------------------------------------------------------- /scripts/ione/smallworld-connectivity.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/smallworld-connectivity.sh -------------------------------------------------------------------------------- /scripts/ione/smallworld-density.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/smallworld-density.sh -------------------------------------------------------------------------------- /scripts/ione/smallworld.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/smallworld.sh -------------------------------------------------------------------------------- /scripts/ione/smallworld2.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/smallworld2.sh -------------------------------------------------------------------------------- /scripts/ione/time.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/ione/time.sh -------------------------------------------------------------------------------- /scripts/isorank/components.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/components.sh -------------------------------------------------------------------------------- /scripts/isorank/fully.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/fully.sh -------------------------------------------------------------------------------- /scripts/isorank/ppi_changefeats.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/ppi_changefeats.sh -------------------------------------------------------------------------------- /scripts/isorank/ppi_delnodes.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/ppi_delnodes.sh -------------------------------------------------------------------------------- /scripts/isorank/randomclone.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/randomclone.sh -------------------------------------------------------------------------------- /scripts/isorank/realdata.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/realdata.sh -------------------------------------------------------------------------------- /scripts/isorank/seed.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/seed.sh -------------------------------------------------------------------------------- /scripts/isorank/seeds_k.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/seeds_k.sh -------------------------------------------------------------------------------- /scripts/isorank/seeds_range.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/seeds_range.sh -------------------------------------------------------------------------------- /scripts/isorank/semi.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/semi.sh -------------------------------------------------------------------------------- /scripts/isorank/smallworld-connectivity.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/smallworld-connectivity.sh -------------------------------------------------------------------------------- /scripts/isorank/smallworld-density.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/smallworld-density.sh -------------------------------------------------------------------------------- /scripts/isorank/smallworld.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/smallworld.sh -------------------------------------------------------------------------------- /scripts/isorank/smallworld2.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/smallworld2.sh -------------------------------------------------------------------------------- /scripts/isorank/time.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/isorank/time.sh -------------------------------------------------------------------------------- /scripts/latest_FAGCN.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/latest_FAGCN.sh -------------------------------------------------------------------------------- /scripts/nawal.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/nawal.sh -------------------------------------------------------------------------------- /scripts/pale/components.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/pale/components.sh -------------------------------------------------------------------------------- /scripts/pale/smallworld-density.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/pale/smallworld-density.sh -------------------------------------------------------------------------------- /scripts/pale/time.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/pale/time.sh -------------------------------------------------------------------------------- /scripts/pale_muse.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/pale_muse.sh -------------------------------------------------------------------------------- /scripts/regal.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/regal.sh -------------------------------------------------------------------------------- /scripts/regal/components.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/regal/components.sh -------------------------------------------------------------------------------- /scripts/regal/smallworld-density.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/regal/smallworld-density.sh -------------------------------------------------------------------------------- /scripts/regal/time.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/regal/time.sh -------------------------------------------------------------------------------- /scripts/regal_real.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/regal_real.sh -------------------------------------------------------------------------------- /scripts/sample_atoan.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/sample_atoan.txt -------------------------------------------------------------------------------- /scripts/sample_atoan.txt.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/sample_atoan.txt.sh -------------------------------------------------------------------------------- /scripts/sample_script.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/sample_script.sh -------------------------------------------------------------------------------- /scripts/shuffle_semi.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/shuffle_semi.sh -------------------------------------------------------------------------------- /scripts/split_dict.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/split_dict.sh -------------------------------------------------------------------------------- /scripts/time.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/time.sh -------------------------------------------------------------------------------- /scripts/time2.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/time2.sh -------------------------------------------------------------------------------- /scripts/uil_sample.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/scripts/uil_sample.sh -------------------------------------------------------------------------------- /utils/3d_visualization_tool.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/3d_visualization_tool.ipynb -------------------------------------------------------------------------------- /utils/connected_components.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/connected_components.py -------------------------------------------------------------------------------- /utils/count_node_same_features.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/count_node_same_features.py -------------------------------------------------------------------------------- /utils/create_features.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/create_features.py -------------------------------------------------------------------------------- /utils/create_prior_matrix_H.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/create_prior_matrix_H.py -------------------------------------------------------------------------------- /utils/edgelist_to_graphsage.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/edgelist_to_graphsage.py -------------------------------------------------------------------------------- /utils/extract_data_from_graph.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/extract_data_from_graph.py -------------------------------------------------------------------------------- /utils/feature_groundtruth_checking.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/feature_groundtruth_checking.py -------------------------------------------------------------------------------- /utils/feature_statistics.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/feature_statistics.py -------------------------------------------------------------------------------- /utils/filter_dataset_by_dict.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/filter_dataset_by_dict.py -------------------------------------------------------------------------------- /utils/filter_graph_by_degree.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/filter_graph_by_degree.py -------------------------------------------------------------------------------- /utils/fix_features.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/fix_features.py -------------------------------------------------------------------------------- /utils/gen_and_visual_graph.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/gen_and_visual_graph.py -------------------------------------------------------------------------------- /utils/gen_dict.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/gen_dict.py -------------------------------------------------------------------------------- /utils/generate_groundtruth.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/generate_groundtruth.py -------------------------------------------------------------------------------- /utils/get_sub_graph.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/get_sub_graph.py -------------------------------------------------------------------------------- /utils/graph_utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/graph_utils.py -------------------------------------------------------------------------------- /utils/graphsage_to_edgelist.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/graphsage_to_edgelist.py -------------------------------------------------------------------------------- /utils/graphsage_to_mat.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/graphsage_to_mat.py -------------------------------------------------------------------------------- /utils/mat_to_graphsage.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/mat_to_graphsage.py -------------------------------------------------------------------------------- /utils/merge_graphs.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/merge_graphs.py -------------------------------------------------------------------------------- /utils/pale_facebook_preprocess.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/pale_facebook_preprocess.py -------------------------------------------------------------------------------- /utils/pale_random_clone.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/pale_random_clone.py -------------------------------------------------------------------------------- /utils/random_clone.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/random_clone.py -------------------------------------------------------------------------------- /utils/random_clone_add.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/random_clone_add.py -------------------------------------------------------------------------------- /utils/random_clone_delete.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/random_clone_delete.py -------------------------------------------------------------------------------- /utils/random_delete_nodes.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/random_delete_nodes.py -------------------------------------------------------------------------------- /utils/read_embedding.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/read_embedding.py -------------------------------------------------------------------------------- /utils/regal_network_creator.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/regal_network_creator.py -------------------------------------------------------------------------------- /utils/shuffle_graph.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/shuffle_graph.py -------------------------------------------------------------------------------- /utils/shuffle_graph_old.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/shuffle_graph_old.py -------------------------------------------------------------------------------- /utils/sig_to_graphsage.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/sig_to_graphsage.py -------------------------------------------------------------------------------- /utils/split_dict.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/split_dict.py -------------------------------------------------------------------------------- /utils/split_embeddings.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/split_embeddings.py -------------------------------------------------------------------------------- /utils/synthetic_graph.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/synthetic_graph.py -------------------------------------------------------------------------------- /utils/tsne.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vinhsuhi/GAlign/HEAD/utils/tsne.py --------------------------------------------------------------------------------