├── .gitignore ├── .vscode └── launch.json ├── CHANGELOG.md ├── LICENSE ├── README.md ├── __init__.py ├── compute_stats.py ├── config.py ├── convert_chkpt_tf2pytorch.py ├── convert_format.py ├── dataloader ├── __init__.py ├── augs.py ├── infer_loader.py └── train_loader.py ├── dataset.py ├── diagram.png ├── docs ├── diagram.png └── seg.gif ├── environment.yml ├── examples ├── .ipynb_checkpoints │ └── usage-checkpoint.ipynb └── usage.ipynb ├── extract_patches.py ├── infer ├── __init__.py ├── base.py ├── tile.py └── wsi.py ├── metrics ├── README.md ├── __init__.py └── stats_utils.py ├── misc ├── __init__.py ├── patch_extractor.py ├── utils.py ├── viz_utils.py └── wsi_handler.py ├── models ├── __init__.py └── hovernet │ ├── __init__.py │ ├── net_desc.py │ ├── net_utils.py │ ├── opt.py │ ├── post_proc.py │ ├── run_desc.py │ ├── targets.py │ └── utils.py ├── requirements.txt ├── run_infer.py ├── run_tile.sh ├── run_train.py ├── run_utils ├── __init__.py ├── callbacks │ ├── __init__.py │ ├── base.py │ ├── logging.py │ └── serialize.py ├── engine.py └── utils.py ├── run_wsi.sh ├── seg.gif ├── type_info.json └── variables_tf2pytorch.csv /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vqdang/hover_net/HEAD/.gitignore -------------------------------------------------------------------------------- /.vscode/launch.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vqdang/hover_net/HEAD/.vscode/launch.json -------------------------------------------------------------------------------- /CHANGELOG.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/vqdang/hover_net/HEAD/CHANGELOG.md -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- 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