├── .gitignore ├── LICENSE ├── LICENSE-3RD-PARTY ├── README.md ├── environment.yaml └── treegraph ├── IO ├── __init__.py └── io.py ├── __init__.py ├── attribute_centres.py ├── build_graph.py ├── build_skeleton.py ├── calculate_voxel_length.py ├── common.py ├── cyl2ply.py ├── cylinder_fitting.py ├── distance_from_base.py ├── distance_from_tip.py ├── downsample.py ├── estimate_radius.py ├── fit_cylinders.py ├── generate_cylinder_model.py ├── graph_process.py ├── main.py ├── plots.py ├── scripts ├── batch_tree2qsm.py ├── generate_inputs.py ├── print_results.py └── tree2qsm.py ├── split_furcation.py ├── taper.py └── third_party ├── available_cpu_count.py ├── closestDistanceBetweenLines.py ├── cyl2ply.py ├── cylinder_fitting.py ├── ply_io.py ├── point2line.py ├── ransac_cyl_fit.py └── shortpath.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wanxinyang/treegraph/HEAD/.gitignore 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