├── .gitignore
├── README.md
├── app
├── .gitignore
├── app.R
├── data
│ ├── IND_remittances.csv
│ ├── Katrina_Migration.csv
│ └── us-states.geojson
├── rsconnect
│ └── shinyapps.io
│ │ └── willbpayne
│ │ ├── relational_reprojection_platform.dcf
│ │ └── rrp_beta.dcf
└── www
│ └── RRP_style.css
├── docs
└── relationalreprojection.jpeg
├── relational_reprojection_platform.Rproj
└── rsconnect
└── shinyapps.io
└── willbpayne
└── relational_reprojection_platform.dcf
/.gitignore:
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1 | .Rproj.user
2 | .Rhistory
3 | .RData
4 | .Ruserdata
5 | .DS_Store
6 | PCP_functions
7 | testPlot3.svg
8 |
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/README.md:
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1 | # Relational Reprojection Platform
2 |
3 | While quantitative geography has long acknowledged that non-Cartesian spaces and distances are often more appropriate for analyzing and visualizing real-world data and complex spatial phenomena, commonly available GIS software solutions make working with non-linear distances extremely difficult. Current prevailing GIS logics force specific kinds of data standards not relevant to many exploratory spatial analyses.
4 |
5 | Our **Relational Reprojection Platform (RRP)** fills this gap with a simple stereographic projection engine centering any given data point to the rest of the set, and transforming great circle distances from this point to the other locations using a variety of non-linear functions as options with particular use cases in mind. This method of re-projecting data allows users to quickly and easily explore spatial relationships within complex spatial data sets.
6 |
7 | Our initial release is a [Shiny app](https://willbpayne.shinyapps.io/rrp_beta/) that allows users to upload simple CSV files with geographic coordinates and data columns and minimal cleaning and explore a variety of spatial transformations of their data. We hope this heuristic tool will enhance the exploratory stages of social research using spatial data.
8 |
9 | 
10 |
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/app/.gitignore:
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1 | test.svg
2 |
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/app/app.R:
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1 | # This is a Shiny web application. You can run the application by clicking
2 | # the 'Run App' button above. Find out more about Shiny here: http://shiny.rstudio.com/
3 |
4 | library(base)
5 | library(datasets)
6 | library(dplyr)
7 | library(forcats)
8 | library(geojsonsf) # read in GeoJSON for background
9 | library(geosphere) # where we get bearing
10 | library(ggforce) # to plot circles
11 | library(ggplot2)
12 | library(ggrepel)
13 | library(gmt) # actually for geodist
14 | library(graphics)
15 | library(grDevices)
16 | library(httpuv) # ditto
17 | library(lubridate)
18 | library(methods)
19 | library(pracma)
20 | library(purrr)
21 | library(readr)
22 | library(rsconnect) # for web hosting
23 | library(scico) # for newer graph colors (colorblind friendly, better for continuous)
24 | library(sf) # for geometry transformations
25 | #library(shiny)
26 | #library(shinylive) # to host this on GitHub Pages
27 | library(stats)
28 | library(stringr)
29 | library(svglite)
30 | library(tibble)
31 | library(tidyr)
32 | library(tidyverse)
33 | library(useful) # for cartesian conversions
34 | library(utils)
35 |
36 | options(ggrepel.max.overlaps = Inf)
37 |
38 | # libraries we thought we needed but don't use yet
39 |
40 | #library(sp) # might not need
41 | #library(tools) #to learn file extension
42 | #library(jsonlite) # for loading in json files
43 | #library(geojson) # for loading geojson (need this for geojsonio to work)
44 | #library(geojsonio) # for loading geojson
45 |
46 | dataFile <- "data/Katrina_Migration.csv" # for testing
47 |
48 | ########################################
49 | ## UI PARTY TONIGHT! ##
50 | ########################################
51 |
52 | ui <- fluidPage(theme = "RRP_style.css",
53 | div(style = "padding: 10px", h1("Relational Reprojection Platform (BETA)"),
54 | "Created by ", tags$a(href="https://willbpayne.com", "Dr. Will B. Payne, ", target="blank"),
55 | "Rutgers University ", tags$a(href="mailto:will.b.payne@rutgers.edu", "(Contact)"),
56 | "and ", tags$a(href="https://cmes.fas.harvard.edu/people/eve-mcglynn", "Dr. Evangeline McGlynn, ", target="blank"),
57 | "Harvard University ", tags$a(href="mailto:emcglynn@fas.harvard.edu", "(Contact)."),
58 | h5("RRP reprojects geographic point datasets to focus on a central point (azimuth) with a variety of non-linear distance transformations for visualization (including via the 'Export SVG' button below)."),
59 | h5("Upload a CSV with latitude and longitude columns (and an 'isCTR' column with a single value of 1 for the center) and at least one numeric variable to assign to point area, as well as a GeoJSON polygon background layer."),
60 | h5("Sample dataset shows ACS 2006 1-year estimates of people who moved from Louisiana to other U.S. states (the year after Hurricane Katrina). Polygon data from",
61 | tags$a(href="https://www.naturalearthdata.com", "Natural Earth.", target="blank"))), # Application title and credit
62 | sidebarLayout(sidebarPanel(width=5,
63 | div(class = "panel",
64 | div(style = "font-size: 14px; padding: 0px; margin-top: -5px;",
65 | fluidRow(
66 | column(5,fileInput("uploadFile"," 1. Select Data File (CSV)", multiple = FALSE, accept = NULL)),
67 | column(2,checkboxInput("basemap","Show Polygons?", value = TRUE, width = NULL)),
68 | column(5,fileInput("uploadPolygon"," 2. Select Polygons (GeoJSON)", multiple = FALSE, accept = NULL))
69 | )),
70 | div(style = "font-size: 14px; padding: 10px 0px; margin-top: -35px",
71 | fluidRow(
72 | column(12,radioButtons("interpMeth", "3. Choose Distance Interpolation Method", choices = c("Great Circle","Square Root","Cube Root","Log","Custom"), inline = TRUE, width = "100%", selected = "Square Root"))
73 | )),
74 | div(style = "font-size: 14px; padding: 10px 0px; margin-top: -20px",
75 | fluidRow(
76 | column(6, uiOutput("ValChoicesFromServer")),
77 | column(6,sliderInput("SymbolSizeRange", "Point Size Range", 0, 50, c(1, 25), ticks = TRUE)
78 | ))),
79 | div(style = "font-size: 14px; padding: 10px 0px; margin-top: -30px",
80 | fluidRow(
81 | column(6, uiOutput("NameChoicesFromServer")),
82 | column(6, sliderInput("label_size", "Label Size", 1, 10, 3, ticks = TRUE)
83 | ))),
84 | div(style = "font-size: 14px; padding: 10px 0px; margin-top: -40px",
85 | fluidRow(
86 | column(4,checkboxInput("labelsOn", "Show Labels?", value = TRUE, width = NULL)),
87 | column(4,checkboxInput("removeZeroes","Remove Zero Values?", value = TRUE, width = NULL)),
88 | column(4,checkboxInput("latlon","Show Lat/Lon Plot", value = FALSE, width = NULL))
89 | )),
90 | div(style = "font-size: 14px; padding: 10px 0px; margin-top: -25px",
91 | fluidRow(
92 | column(6,selectInput("plotTheme",
93 | label = NULL, c("Light Theme", "Dark Theme", "Mono Theme"),
94 | selected = "Light", multiple = FALSE, selectize = TRUE, width = "100%", size = NULL)),
95 | column(6,
96 | div(style = "margin-bottom:15px",
97 | downloadButton('downloadPlot','Export SVG'))),
98 | )),
99 | conditionalPanel(condition = "input.interpMeth == 'Custom'",
100 | uiOutput("CustomDistanceSlider")),
101 | conditionalPanel(condition = "input.latlon == 1",
102 | div(style = "font-size: 14px; padding: 10px 0px; margin-top: -35p",
103 | fluidRow(
104 | column(12, plotOutput("distPlot", height = "250px")), #plot size
105 | )))
106 | )),
107 | #end of sidebar panel, end of class panel div
108 | mainPanel(width=7,div(class = "mainP", htmlOutput("newdfparser"), plotOutput("geoPlot", height = "800px")
109 | ))
110 | )
111 | )
112 |
113 | #div(style = "font-size: 14px; padding: 10px 0px; margin-top: -50px",
114 | # fluidRow(
115 | # column(6,checkboxInput("centerOn", "Show Center?", value = FALSE, width = NULL)),
116 | # column(6, checkboxInput("HideOverlappingLabels","Hide Overlapping Labels?", value = TRUE, width = NULL))
117 | # )),
118 |
119 |
120 | #div(style = "font-size: 14px; padding: 10px 0px; margin:3%; margin-top: -35px",
121 | # fluidRow(
122 | # column(6,sliderInput("SymbolSizeRange", "Point Size Range", 0, 50, c(1, 25), ticks = TRUE)
123 | # ))),
124 | # Radio buttons for interpolation method
125 | #div(style = "font-size: 14px; padding: 10px 0px; margin:3%; margin-top: -25px",
126 | # fluidRow(
127 | # column(12,radioButtons("valTransMeth","Value (Symbol Size) Interpolation", choices = c("None", "Square Root", "Log"), inline = TRUE, width = "100%", selected = "Square Root"))
128 | # )),
129 |
130 | #div(style = "font-size: 14px; padding: 10px 0px; margin:3%; margin-top: -40px",
131 | # fluidRow(
132 | # column(12,radioButtons("interpMeth", "Distance Interpolation", choices = c("Great Circle","Square Root","Cube Root","Log","Custom"), inline = TRUE, width = "100%", selected = "Square Root"))
133 | # )),
134 |
135 | ## If distance transformation radio button is on "Custom", show cut point slider
136 |
137 |
138 |
139 |
140 | ########################################
141 | ## STOP, SERVER TIME! ##
142 | ########################################
143 |
144 | server <- function(input, output) {
145 |
146 | output$distPlot <- renderPlot({ # the basic dot plot for sidebar
147 |
148 | if (is.null(input$uploadFile) == TRUE){
149 | df <- read.csv(file = "data/Katrina_Migration.csv")
150 | }
151 | else{
152 | uploadFileData <- input$uploadFile
153 | df <- read.csv(file = uploadFileData$datapath)
154 | }
155 |
156 | # if (is.null(input$uploadPolygon) == TRUE){
157 | # polygon <- geojson_sf("data/us-states.geojson")
158 | # }
159 | # else{
160 | # uploadPolygonData <- input$uploadPolygon
161 | # polygon <- geojson_sf(file = uploadPolygonData$datapath)
162 | # }
163 |
164 | par(bg = "#F0F0F0", #default color is #f5f5f5
165 | mgp=c(1.75,0.5,0),
166 | mar=c(4,4,4,4),
167 | col.lab="#404040",
168 | col.axis="#404040",
169 | fg="#404040")
170 |
171 | df3 <- df # cloning for non-destructive editing and with a different name than in dataframefinder() below
172 | latNames2 <- c("lat","Lat","LAT", "latitude", "Latitude", "LATITUDE", "y","Y", "coords.x2") # add as they come up
173 | lonNames2 <- c("lon","Lon","LON","long","Long","LONG","longitude", "Longitude", "LONGITUDE", "x","X", "coords.x1")
174 |
175 | for (col in 1:ncol(df)) {
176 | if (max(as.numeric(df[[col]]), na.rm = T) <= 90.0
177 | && min(as.numeric(df[[col]]), na.rm = T) >= -90.0
178 | && names(df)[[col]] %in% latNames2) # lat
179 | {
180 | df3$latitude <- as.numeric(df[[col]])
181 | print("I found latitude!")
182 | }
183 | else{
184 | if (max(as.numeric(df[[col]]), na.rm = T) <= 180.0
185 | && min(as.numeric(df[[col]]), na.rm = T) >= -180.0
186 | && names(df)[col] %in% lonNames2) # lon
187 | {
188 | df3$longitude <- as.numeric(df[[col]])
189 | }
190 | }
191 | }
192 |
193 | plot(df3$longitude, df3$latitude,
194 | col = "#404040",
195 | xlab = "Longitude",
196 | ylab = "Latitude",
197 | tck = -.04,
198 | cex.axis = 0.7
199 | )
200 |
201 | })
202 |
203 | output$downloadPlot <- downloadHandler(
204 | filename = function(){paste("testPlot",'.svg',sep='')},
205 | content = function(file){
206 | ggsave(file, plot = last_plot(),
207 | height = 4000,
208 | width = 4000,
209 | units = "px") #distPlot the right thing to call here or p2?
210 | })
211 |
212 | dataframefinder <- function() { # First reactive function!
213 | if(is.null(input$uploadFile) == TRUE){
214 | found_df <- read.csv(file = dataFile)
215 | } else {
216 | n <- input$uploadFile
217 | found_df <- read.csv(file = n$datapath)
218 | }
219 | return(found_df)
220 | }
221 |
222 | polygonfinder <- function() { # Second reactive function!
223 | if(is.null(input$uploadPolygon) == TRUE){
224 | polygon <- geojson_sf("data/us-states.geojson")
225 | } else {
226 | n <- input$uploadPolygon
227 | polygon <- geojson_sf(n$datapath)
228 | }
229 | return(polygon)
230 | }
231 |
232 | output$newdfparser <- renderText({ # New place to store reactive output
233 | parserOutputs <- dfparser(dataframefinder()) # run it once!
234 | if (parserOutputs[[2]] > 20037.5){
235 | distanceWarning <- " (over half Earth's circumference; plot may be unreliable!)"
236 | }
237 | else {
238 | distanceWarning <- ""
239 | }
240 | paste(" Maximum distance in dataset: ", round(parserOutputs[[2]],0), "km",distanceWarning,"
Concentric circle spacing: ", round((parserOutputs[[2]] / 10),2), "km", "",
241 | " Center point: ", parserOutputs[[5]], " ",
242 | " (Latitude: ", round(parserOutputs[[3]], 5), ", Longitude: ", round(parserOutputs[[4]], 5), ")", sep='',collapse = "")
243 | })
244 |
245 | dfparser <- function(selected_dataframe) { # First non-reactive function! We copied a bunch o code for this
246 | # ^^ works in concert with newdfparser
247 | df <- selected_dataframe
248 | df_ext <- ".csv"
249 |
250 | colListOrig <- colnames(df) # store column names for later
251 | latNames <- list("lat","Lat","LAT", "latitude", "Latitude", "LATITUDE", "y","Y", "coords.x2") # add as they come up
252 | lonNames <- list("lon","Lon","LON","long","Long","LONG","longitude", "Longitude", "LONGITUDE", "x","X", "coords.x1")
253 | nameChoices <- c() # changed from a list to a vector
254 | valChoices <- c() # ditto
255 |
256 | df2 <- df # cloning df for non-destructive editing
257 |
258 | latflag <- 0 # need these here for the column detection
259 | lonflag <- 0
260 | ctrBinflag <- 0
261 | nameFlag <- 0
262 | valflag <- 0
263 |
264 | for (col in 1:ncol(df)) {
265 | if (typeof(df[[col]]) == "double"
266 | && latflag == 0
267 | && max(as.numeric(df[[col]]), na.rm = T) <= 90.0
268 | && min(as.numeric(df[[col]]), na.rm = T) >= -90.0
269 | && names(df)[[col]] %in% latNames) # lat
270 | {
271 | df2$lat <- df[[col]]
272 | latflag <- 1}
273 | else{
274 | if (typeof(df[[col]]) == "double"
275 | && lonflag == 0
276 | && max(as.numeric(df[[col]]), na.rm = T) <= 180.0
277 | && min(as.numeric(df[[col]]), na.rm = T) >= -180.0
278 | && names(df)[col] %in% lonNames) # lon
279 | {
280 | df2$lon <- df[[col]]
281 | lonflag <- 1}
282 | else{
283 | if (typeof(df[[col]]) != "character"
284 | && typeof(df[[col]]) != "list"
285 | && min(as.numeric(df[[col]]), na.rm = T) == 0
286 | && max(as.numeric(df[[col]]), na.rm = T) == 1
287 | && sum(as.numeric(df[[col]]), na.rm = T) == 1) # ctrBin
288 | { df2$ctrBin <- as.logical(df[[col]])
289 | ctrBinflag <- 1}
290 | else{
291 | if (typeof(df[[col]]) == "character" # catches name and name_long
292 | || is.factor(df[[col]]) == T) # valName
293 | { if (nameFlag == 0)
294 | {df2$valName <- as.character(df[[col]])
295 | nameChoices <- c(nameChoices, names(df)[[col]])
296 | nameFlag <- 1}
297 | else{
298 | nameChoices <- c(nameChoices, names(df)[[col]])}
299 | }
300 | else{
301 | if (typeof(df[[col]]) == "integer" || typeof(df[[col]]) == "double" # val
302 | && !(names(df)[col] %in% lonNames)
303 | && !(names(df)[col] %in% latNames)
304 | && names(df[col]) != "geometry")
305 | { if (valflag == 0)
306 | {df2$val <- as.double(df[[col]])
307 | ValColNametoprint <- names(df)[[col]]
308 | valChoices <- c(valChoices, names(df)[[col]])
309 | valflag <- 1}
310 | else{
311 | valChoices <- c(valChoices, names(df)[[col]])}
312 | }
313 | }
314 | }
315 | }
316 | }
317 | }
318 | if("ctrBin" %in% colnames(df2)) {
319 | ctrPtName <- df2$valName[df2$ctrBin == TRUE]
320 | ctrPt <- c(df2$lat[df2$ctrBin == TRUE],df2$lon[df2$ctrBin == TRUE]) # get lat/lon
321 |
322 | } else {
323 | ctrPtName <- "Default Center"
324 | ctrPt <- c(median(df2$lat), median(df2$lon)) #
325 | }
326 |
327 | valChoicesList <- as.list(valChoices)
328 |
329 | nameChoicesList <- as.list(nameChoices)
330 |
331 | # if(df_ext == "csv"){
332 | # df2 <- dplyr::select(df2, valName, val, lat, lon) # just the fields we want
333 | # } else {
334 | # if(df_ext == "geojson"){
335 | # df2 <- dplyr::select(df2, valName, val, lat, lon) #something else
336 | # } else {
337 | # # print(paste("What even is this?"))
338 | # }
339 | # }
340 |
341 | df2$distance <- geodist(ctrPt[1], ctrPt[2], df2$lat, df2$lon, units = "km")
342 | maxdist <- max(df2$distance) # max great circle distance in kilometers
343 |
344 | maxvaltoprint <- max(df2$val)
345 | minvaltoprint <- min(df2$val)
346 |
347 | my_list <- list(df2, maxdist, ctrPt[1], ctrPt[2], ctrPtName, ValColNametoprint, maxvaltoprint, minvaltoprint, valChoicesList, nameChoicesList)
348 | return(my_list)
349 | }
350 |
351 | output$CustomValueSlider <- renderUI({
352 | valuesfromparser <- dfparser(dataframefinder())
353 | maxvalue_forslider <- valuesfromparser[[7]]
354 | minvalue_forslider <- valuesfromparser[[8]]
355 | sliderInput("manualValueCutPoints", "Value Cut Points", min = round(minvalue_forslider), max = round(maxvalue_forslider), value = c((maxvalue_forslider/3),(maxvalue_forslider*2)/3), step = NULL)
356 | })
357 |
358 | output$CustomDistanceSlider <- renderUI({
359 | maxdist_forslider <- dfparser(dataframefinder())[[2]]
360 | default_dist_low <- maxdist_forslider/3
361 | default_dist_high <- (maxdist_forslider*2)/3
362 | if (maxdist_forslider < 10) # keep round slider numbers only for big distances
363 | {
364 | sliderInput("manualCutPoints", "Custom Distance Cut Points", min = 0, max = round(maxdist_forslider,2), value = c(round(default_dist_low,2),round(default_dist_high,2)), step = NULL, animate = FALSE, post = ' km', round = FALSE)
365 | }
366 | else
367 | {
368 | sliderInput("manualCutPoints", "Custom Distance Cut Points", min = 0, max = round(maxdist_forslider,-1), value = c(round(default_dist_low,-1),round(default_dist_high,0)), step = NULL, animate = FALSE, post = ' km', round = TRUE)
369 | }
370 | })
371 |
372 | output$ValChoicesFromServer <- renderUI({ # serve up a list of value columns
373 | choicesForDropdown <- dfparser(dataframefinder())[[9]]
374 | selectInput("valSelection", "4. Select Point Size Column",
375 | multiple = FALSE,
376 | choices = choicesForDropdown,
377 | selected = choicesForDropdown[[1]],
378 | selectize = TRUE,
379 | width = "100%", size = NULL)
380 | })
381 |
382 | output$NameChoicesFromServer <- renderUI({ # serve up a list of value columns
383 | namechoicesForDropdown <- dfparser(dataframefinder())[[10]]
384 | selectInput("nameSelection", "5. Select Label Column",
385 | multiple = FALSE,
386 | choices = namechoicesForDropdown,
387 | selected = namechoicesForDropdown[1],
388 | selectize = TRUE,
389 | width = "100%", size = NULL)
390 | })
391 |
392 | output$geoPlot <- renderPlot({
393 |
394 | ###################################
395 | # PARSE COLUMNS #
396 | ###################################
397 |
398 | df <- dataframefinder()
399 | df_ext <- ".csv"
400 |
401 | colListOrig <- colnames(df) # store column names for later
402 | latNames <- list("lat","Lat","LAT", "latitude", "Latitude", "LATITUDE", "y","Y", "coords.x2") # add as they come up
403 | lonNames <- list("lon","Lon","LON","long","Long","LONG","longitude", "Longitude", "LONGITUDE", "x","X", "coords.x1")
404 | valNameChoices <- list()
405 | valChoices <- list()
406 |
407 | df2 <- df # cloning df for non-destructive editing
408 |
409 | latflag <- 0 # need these here for the column detection
410 | lonflag <- 0
411 | ctrBinflag <- 0
412 | nameFlag <- 0
413 | valFlag <- 0
414 |
415 | for (col in 1:ncol(df)) {
416 | if (typeof(df[[col]]) == "double"
417 | && latflag == 0
418 | && max(as.numeric(df[[col]]), na.rm = T) <= 90.0
419 | && min(as.numeric(df[[col]]), na.rm = T) >= -90.0
420 | && names(df)[[col]] %in% latNames) # lat
421 | {
422 | df2$lat <- df[[col]]
423 | latflag <- 1}
424 | else{
425 | if (typeof(df[[col]]) == "double"
426 | && lonflag == 0
427 | && max(as.numeric(df[[col]]), na.rm = T) <= 180.0
428 | && min(as.numeric(df[[col]]), na.rm = T) >= -180.0
429 | && names(df)[col] %in% lonNames) # lon
430 | {
431 | df2$lon <- df[[col]]
432 | lonflag <- 1}
433 | else{
434 | if (typeof(df[[col]]) != "character"
435 | && typeof(df[[col]]) != "list"
436 | && min(as.numeric(df[[col]]), na.rm = T) == 0
437 | && max(as.numeric(df[[col]]), na.rm = T) == 1
438 | && sum(as.numeric(df[[col]]), na.rm = T) == 1) # ctrBin
439 | { df2$ctrBin <- as.logical(df[[col]])
440 | ctrBinflag <- 1}
441 | else{
442 | if (typeof(df[[col]]) == "character" # catches name and name_long
443 | || is.factor(df[[col]]) == T) # valName
444 | { if (nameFlag == 0)
445 | {df2$valName <- as.character(df[[col]])
446 | nameFlag <- 1}
447 | else{
448 | valNameChoices <- c(valNameChoices, names(df)[[col]])}
449 | }
450 | else{
451 | if (typeof(df[[col]]) == "integer" || typeof(df[[col]]) == "double" # val
452 | && !(names(df)[col] %in% lonNames)
453 | && !(names(df)[col] %in% latNames)
454 | && names(df[col]) != "geometry")
455 | { if (valFlag == 0)
456 | {df2$val <- as.double(df[[col]])
457 | LegendValName <- names(df)[[col]]
458 | valFlag <- 1}
459 | else{
460 | valChoices <- c(valChoices, names(df)[[col]])}
461 | }
462 | }
463 | }
464 | }
465 | }
466 | }
467 |
468 | valColumn <- input$valSelection # override with UI selection
469 | LegendValName <- input$valSelection # update in the legend too
470 | df2$val <- df[[valColumn]]
471 |
472 | nameColumn <- input$nameSelection # override with UI selection
473 | df2$valName <- df[[nameColumn]]
474 |
475 | ###################################
476 | # SET CENTER POINT #
477 | ###################################
478 |
479 | if("ctrBin" %in% colnames(df2)) {
480 | ctrPtName <- df2$valName[df2$ctrBin == TRUE]
481 | ctrPt <- c(df2$lat[df2$ctrBin == TRUE],df2$lon[df2$ctrBin == TRUE]) # get lat/lon
482 |
483 | } else {
484 | ctrPtName <- "Default Center"
485 | ctrPt <- c(median(df2$lat), median(df2$lon)) #
486 | }
487 |
488 | ###################################
489 | # CREATE DF2 #
490 | ###################################
491 |
492 | if(df_ext == "csv"){
493 | df2 <- dplyr::select(df2, valName, val, lat, lon) # just the fields we want
494 | } else {
495 | if(df_ext == "geojson"){
496 | df2 <- dplyr::select(df2, valName, val, lat, lon) #something else
497 | } else {
498 | # print(paste("What even is this?"))
499 | }
500 | }
501 | df2$distance <- geodist(ctrPt[1], ctrPt[2], df2$lat, df2$lon, units = "km")*1000
502 | maxdist <- max(df2$distance) # max great circle distance in meters
503 |
504 | df2 <- df2 %>% mutate(ctrPtGeobearing = geosphere::bearing(c(ctrPt[2],ctrPt[1]), cbind(lon, lat), a=6378137, f=1/298.257223563)) # get bearing of all points to center
505 |
506 | for (row in 1:nrow(df2)) # convert from geographic bearings to polar coordinates
507 | {if(df2$ctrPtGeobearing[row] <= 0)
508 | # if geobearing is 0 or negative, mathbearing is 90 plus bearing
509 | df2$ctrPtMathbearing[row] <- abs(df2$ctrPtGeobearing[row]) + 90
510 | if(df2$ctrPtGeobearing[row] > 0 & df2$ctrPtGeobearing[row] < 90)
511 | # if geobearing is positive and equal to or under 90, mathbearing is 90 - bearing
512 | df2$ctrPtMathbearing[row] <- (90 - df2$ctrPtGeobearing[row])
513 | if(df2$ctrPtGeobearing[row] >= 90 & df2$ctrPtGeobearing[row] <= 180)
514 | # if geobearing is positive and between 90 and 180 (inclusive), mathbearing is 360 - (geobearing - 90)
515 | df2$ctrPtMathbearing[row] <- 360 - (df2$ctrPtGeobearing[row] - 90)}
516 | rm(row)
517 |
518 | df2 <- dplyr::select(df2,-starts_with("ctrPtGeo"))
519 |
520 | maxdist <- max(df2$distance) # max great circle distance
521 |
522 | ###################################
523 | # POLYGON BACKGROUND #
524 | ###################################
525 |
526 | polygon <- polygonfinder()
527 |
528 | # fix multipolygon issue
529 | polygon_cast <- st_cast(st_cast(polygon,"MULTIPOLYGON"),"POLYGON")
530 | print("CAST THE BACKGROUND TO POLYGONS!")
531 |
532 | # this converts it to a dataframe of just points
533 | polygon_dataframe = data.frame(st_coordinates(st_cast(polygon_cast$geometry,"MULTIPOINT")))
534 |
535 | # fix data type issue
536 | polygon_dataframe$L1_Chr <- as.character(polygon_dataframe$L1)
537 |
538 | # add geographic distance to center point
539 | polygon_dataframe$distance <- geodist(ctrPt[1], ctrPt[2], polygon_dataframe$Y, polygon_dataframe$X, units = "km")*1000
540 |
541 | # add bearing
542 | polygon_dataframe_bearing <- polygon_dataframe %>% mutate(ctrPtGeobearing = geosphere::bearing(c(ctrPt[2],ctrPt[1]), cbind(X, Y), a=6378137, f=1/298.257223563)) # get bearing of all points to center
543 |
544 | # convert to polar coordinates
545 | for (row in 1:nrow(polygon_dataframe_bearing)) # convert from geographic bearings to polar coordinates
546 | {if(polygon_dataframe_bearing$ctrPtGeobearing[row] <= 0)
547 | # if geobearing is 0 or negative, mathbearing is 90 plus bearing
548 | polygon_dataframe_bearing$ctrPtMathbearing[row] <- abs(polygon_dataframe_bearing$ctrPtGeobearing[row]) + 90
549 | if(polygon_dataframe_bearing$ctrPtGeobearing[row] > 0 & polygon_dataframe_bearing$ctrPtGeobearing[row] < 90)
550 | # if geobearing is positive and equal to or under 90, mathbearing is 90 - bearing
551 | polygon_dataframe_bearing$ctrPtMathbearing[row] <- (90 - polygon_dataframe_bearing$ctrPtGeobearing[row])
552 | if(polygon_dataframe_bearing$ctrPtGeobearing[row] >= 90 & polygon_dataframe_bearing$ctrPtGeobearing[row] <= 180)
553 | # if geobearing is positive and between 90 and 180 (inclusive), mathbearing is 360 - (geobearing - 90)
554 | polygon_dataframe_bearing$ctrPtMathbearing[row] <- 360 - (polygon_dataframe_bearing$ctrPtGeobearing[row] - 90)}
555 | rm(row) # remove counter
556 | polygon_dataframe_polar <- dplyr::select(polygon_dataframe_bearing,-starts_with("ctrPtGeo"))
557 |
558 | ###################################
559 | # DATA VALUE TRANSLATION #
560 | ###################################
561 |
562 | valMin <- min(df2$val[df2$val != 0], na.rm = TRUE) # find lowest non-zero value (that will be radius 1)
563 | valMax <- max(df2$val, na.rm = T) # find highest non-zero value (that will be radius X)
564 | valMed <- median(df2$val, na.rm = T) # find median value (that could be radius 1 + X / 2)
565 |
566 | minRadius <- input$SymbolSizeRange[1] # change this with the UI later?
567 | maxRadius <- input$SymbolSizeRange[2] # change this with the UI later?
568 |
569 | # if(input$valTransMeth == "None"){
570 | # df2$valTrans <- (df2$val/valMax) * maxRadius + (minRadius - 1)
571 | # # proportion of maximum value without scaling
572 | # } else if(input$valTransMeth == "Square Root"){
573 | # df2$valTrans <- (sqrt(df2$val/valMax)) * maxRadius + (minRadius - 1)
574 | # } else if(input$valTransMeth == "Log"){
575 | # df2$valTrans <- (log(df2$val)/log(valMax) * maxRadius) + (minRadius - 1)
576 | # df2$valTrans[is.infinite(df2$valTrans)]<-0
577 | # } else if(input$valTransMeth == "Custom"){
578 | # df2$valTrans <- df2$val
579 | # }
580 |
581 | df2$valTrans <- (sqrt(df2$val/valMax)) * maxRadius + (minRadius - 1)
582 |
583 | if(input$removeZeroes == TRUE){
584 | df2$val[df2$val == 0] <- NaN
585 | df2<-subset(df2, val >= 0)
586 | }
587 | if(input$removeZeroes == FALSE){
588 | df2$val[df2$val == 0] <- NA
589 | }
590 |
591 | df2$labelNames <- df2$valName # initialize empty strings for labels
592 | df2$labelNames[df2$val == 0] <- " " # add label text for non-zero values
593 | df2$labelNames[df2$isCTR == FALSE & is.na(df2$val) == TRUE] <- " " # add label text for non-zero values
594 |
595 | ###################################
596 | # GREAT CIRCLE #
597 | ###################################
598 |
599 | # Run polar to cartesian conversion on x and y axes
600 | df2 <- df2 %>% mutate(circdistancex = (useful::pol2cart(distance,ctrPtMathbearing,degrees = TRUE)[[1]]))
601 | df2 <- df2 %>% mutate(circdistancey = (useful::pol2cart(distance,ctrPtMathbearing,degrees = TRUE)[[2]]))
602 |
603 | # Combine x and y into a matrix, add as a column, remove x and y columns
604 | df2$circcoords <- cbind(df2$circdistancex,df2$circdistancey)
605 | df2 <- dplyr::select(df2,-starts_with("circdistance"))
606 |
607 | # Lets make some circles starting at the center point going to maxdist
608 | circles <- data.frame(
609 | x0 = 0,
610 | y0 = 0,
611 | r = seq(0, maxdist,length.out = 11)
612 | )
613 | circles <- circles[-1,] # Remove zero-radius circle
614 |
615 | # set up great circle basemap coords
616 | polygon_dataframe_polar <- polygon_dataframe_polar %>% mutate(
617 | circdistancex = (useful::pol2cart(distance,ctrPtMathbearing,degrees = TRUE)[[1]]),
618 | circdistancey = (useful::pol2cart(distance,ctrPtMathbearing,degrees = TRUE)[[2]])
619 | )
620 | polygon_dataframe_polar$circcoords <- cbind(polygon_dataframe_polar$circdistancex,polygon_dataframe_polar$circdistancey)
621 | polygon_dataframe_polar <- select(polygon_dataframe_polar,-starts_with("circdistancex"))
622 |
623 | ###################################
624 | # LOGARITHMIC SCALE #
625 | ###################################
626 |
627 | # Replot coordinates on log distance scale
628 | df2 <- df2 %>% mutate(
629 | logdistancex = (useful::pol2cart(log(distance + 1),ctrPtMathbearing,degrees = TRUE)[[1]]),
630 | logdistancey = (useful::pol2cart(log(distance + 1),ctrPtMathbearing,degrees = TRUE)[[2]])
631 | )
632 |
633 | # Overrides infinite values
634 | df2$logdistancex[is.nan(df2$logdistancex)] <- 0
635 | df2$logdistancey[is.nan(df2$logdistancey)] <- 0
636 |
637 | # Combine x and y into a matrix, add as a column, remove x and y columns
638 | df2$logcoords <- cbind(df2$logdistancex,df2$logdistancey)
639 | df2 <- dplyr::select(df2,-starts_with("logdistance"))
640 |
641 | # Plot it
642 | df2 <- dplyr::arrange(df2, -val) # sorting for draw order below
643 | df2$num <- ave(df2$val, FUN = seq_along) # also sorting?
644 |
645 | # set up logarithmic basemap values
646 | polygon_dataframe_polar <- polygon_dataframe_polar %>% mutate(
647 | logdistancex = (useful::pol2cart(log(distance + 1),ctrPtMathbearing,degrees = TRUE)[[1]]),
648 | logdistancey = (useful::pol2cart(log(distance + 1),ctrPtMathbearing,degrees = TRUE)[[2]])
649 | )
650 |
651 | # Overrides infinite values
652 | polygon_dataframe_polar$logdistancex[is.nan(polygon_dataframe_polar$logdistancex)] <- 0
653 | polygon_dataframe_polar$logdistancey[is.nan(polygon_dataframe_polar$logdistancey)] <- 0
654 |
655 | # Combine x and y into a matrix, add as a column, remove x and y columns
656 | polygon_dataframe_polar$logcoords <- cbind(polygon_dataframe_polar$logdistancex,polygon_dataframe_polar$logdistancey)
657 | polygon_dataframe_polar <- dplyr::select(polygon_dataframe_polar,-starts_with("logdistance"))
658 |
659 | ###################################
660 | # SQUARE ROUTE #
661 | ###################################
662 |
663 | # Replot coordinates on square root scale, combine x and y into a matrix,
664 | # add as a column, remove x and y columns
665 | df2 <- df2 %>% mutate(
666 | sqrtdistancex = (useful::pol2cart(sqrt(distance),ctrPtMathbearing,degrees = TRUE)[[1]]),
667 | sqrtdistancey = (useful::pol2cart(sqrt(distance),ctrPtMathbearing,degrees = TRUE)[[2]])
668 | )
669 | df2$sqrtcoords <- cbind(df2$sqrtdistancex,df2$sqrtdistancey)
670 | df2 <- select(df2,-starts_with("sqrtdistance"))
671 |
672 | # Set up square root basemap coords
673 | polygon_dataframe_polar <- polygon_dataframe_polar %>% mutate(
674 | sqrtdistancex = (useful::pol2cart(sqrt(distance),ctrPtMathbearing,degrees = TRUE)[[1]]),
675 | sqrtdistancey = (useful::pol2cart(sqrt(distance),ctrPtMathbearing,degrees = TRUE)[[2]])
676 | )
677 | polygon_dataframe_polar$sqrtcoords <- cbind(polygon_dataframe_polar$sqrtdistancex,polygon_dataframe_polar$sqrtdistancey)
678 | polygon_dataframe_polar <- select(polygon_dataframe_polar,-starts_with("sqrtdistance"))
679 |
680 | ###################################
681 | # CUBE ROOT #
682 | ###################################
683 |
684 | # Replot coordinates on cube root distance scale
685 | # Combine x and y into a matrix, add as a column, remove x and y columns
686 | df2 <- df2 %>% mutate(
687 | cuberootdistancex = (useful::pol2cart(pracma::nthroot(distance, 3),ctrPtMathbearing,degrees = TRUE)[[1]]),
688 | cuberootdistancey = (useful::pol2cart(pracma::nthroot(distance, 3),ctrPtMathbearing,degrees = TRUE)[[2]])
689 | )
690 | df2$cuberootcoords <- cbind(df2$cuberootdistancex,df2$cuberootdistancey)
691 | df2 <- select(df2,-starts_with("cuberootdistance"))
692 |
693 | # Set up cube root basemap coords
694 | polygon_dataframe_polar <- polygon_dataframe_polar %>% mutate(
695 | cuberootdistancex = (useful::pol2cart(pracma::nthroot(distance, 3),ctrPtMathbearing,degrees = TRUE)[[1]]),
696 | cuberootdistancey = (useful::pol2cart(pracma::nthroot(distance, 3),ctrPtMathbearing,degrees = TRUE)[[2]])
697 | )
698 | polygon_dataframe_polar$cuberootcoords <- cbind(polygon_dataframe_polar$cuberootdistancex,polygon_dataframe_polar$cuberootdistancey)
699 | polygon_dataframe_polar <- select(polygon_dataframe_polar,-starts_with("cuberootdistancex"))
700 |
701 | ###################################
702 | # CUSTOM DIST #
703 | ###################################
704 | # atm, more just a piecewise linear function
705 | neardist <- input$manualCutPoints[1]*1000
706 | fardist <- input$manualCutPoints[2]*1000
707 | #
708 | chartdist <- c(0, 800, 1200) # this just gets us equal intervals on the graph for the different segments of the lines
709 | #
710 | #
711 | a <- function(x){ # here is some example code for the piecewise funciton
712 | ifelse((x >= 0 & x < neardist),
713 | (x * 400/neardist),
714 | ifelse((neardist <= x & x < fardist),
715 | ((x * 400)/(fardist - neardist) + (400-((400)/(fardist - neardist)*neardist))),
716 | ifelse((fardist <= x & x <= maxdist),((x * 400)/(maxdist - fardist) + (800-((400)/(maxdist - fardist)*fardist))), NA)))
717 | }
718 |
719 | # function to make new circles with any stepwise function set above
720 | custom_predictstep <- function(dataframe) {
721 | customcirclesdataframe <- dataframe # duplicate dataframe
722 | for (row in 1:nrow(dataframe)){
723 | customcirclesdataframe$r[row] <- a(dataframe$r[row])} # applying function a to every row in dataframe
724 | return(customcirclesdataframe)
725 | }
726 | customcircles <- custom_predictstep(circles) # this projects the circles
727 |
728 | # Replot coordinates on custom distance scale using piecewise function
729 | df2 <- df2 %>% mutate(
730 | customdistancex = (useful::pol2cart(a(distance),ctrPtMathbearing,degrees = TRUE)[[1]]),
731 | customdistancey = (useful::pol2cart(a(distance),ctrPtMathbearing,degrees = TRUE)[[2]])
732 | )
733 | df2$customcoords <- cbind(df2$customdistancex,df2$customdistancey)
734 | df2 <- select(df2,-starts_with("customdistance"))
735 |
736 | # custom distance coordinates
737 | polygon_dataframe_polar <- polygon_dataframe_polar %>% mutate(
738 | customdistancex = (useful::pol2cart(a(distance),ctrPtMathbearing,degrees = TRUE)[[1]]),
739 | customdistancey = (useful::pol2cart(a(distance),ctrPtMathbearing,degrees = TRUE)[[2]])
740 | )
741 | polygon_dataframe_polar$customcoords <- cbind(polygon_dataframe_polar$customdistancex,polygon_dataframe_polar$customdistancey)
742 | polygon_dataframe_polar <- select(polygon_dataframe_polar,-starts_with("customdistance"))
743 |
744 | ###################################
745 | # PLOT CALL #
746 | ###################################
747 |
748 | #initating variables
749 | circleColor = "red" #default value for circle color. If they are red, something is broken
750 | ctrPtColor = "red" #default value for center point color. If it is red, something is broken
751 | themeText = "red"
752 |
753 | # PLOT STYLE
754 | darkPlot <- list(
755 | scale_color_scico(palette = "tokyo", begin = 0.1, end = 0.95),
756 | #scale_color_viridis_c(option = "plasma"),
757 | theme(panel.background = element_rect(fill = "grey80", linetype = "blank"),
758 | plot.background = element_rect(fill= "grey80"),
759 | axis.ticks = element_blank(),
760 | axis.text.x = element_blank(),
761 | axis.text.y = element_blank(),
762 | panel.grid = element_blank(),
763 | legend.background = element_rect(fill = "grey80"),
764 | legend.text = element_text(color = "white"),
765 | legend.title = element_text(color = "white")
766 | ),
767 | coord_fixed(),
768 | labs(color = paste0("Total ",tolower(LegendValName), " :: ", '\n',ctrPtName), x = NULL, y = NULL),
769 | geom_point(na.rm = TRUE, stroke = 1, alpha = 0.7, size = df2$valTrans),
770 | guides(colour = "colorbar",size = "legend")#,
771 | )
772 | scale_fill_scico()
773 | lightPlot <- list(
774 | scale_color_scico(palette = "imola", begin = 0.2, end = 0.95),
775 | theme(panel.background = element_blank(),
776 | axis.ticks = element_blank(),
777 | axis.text.x = element_blank(),
778 | axis.text.y = element_blank()),
779 | coord_fixed(),
780 | geom_point(stroke = 1, alpha = 0.78, size = df2$valTrans),
781 | labs(color = paste0("Total ",tolower(LegendValName), " :: ", '\n',ctrPtName), x = NULL, y = NULL),
782 | guides(colour = "colorbar", size = "legend")#,
783 | )
784 |
785 | monoPlot <- list(
786 | scale_color_gradient(low = "gray80", high = "#000000"),
787 | theme(panel.background = element_blank(),
788 | axis.ticks = element_blank(),
789 | axis.text.x = element_blank(),
790 | axis.text.y = element_blank()),
791 | coord_fixed(),
792 | geom_point(stroke = 1, alpha = 0.7, size = df2$valTrans),
793 | labs(color = paste0("Total ",tolower(LegendValName), " :: ", '\n',ctrPtName), x = NULL, y = NULL),
794 | guides(size = guide_legend())#,
795 | )
796 |
797 | #this is where all the themes go
798 | if(input$plotTheme == "Light Theme"){
799 | selectedPlotTheme <- lightPlot
800 | circleColor <- "ivory3"
801 | ctrPtColor <- "red"
802 | themeText = "black" #change for nacis
803 | # themeText = "gray60"
804 | } else if (input$plotTheme == "Dark Theme"){
805 | selectedPlotTheme <-darkPlot
806 | circleColor <- "gray50"
807 | ctrPtColor <- "red"
808 | themeText = "black"
809 | } else if (input$plotTheme == "Mono Theme"){
810 | selectedPlotTheme <-monoPlot
811 | circleColor <- "gray75"
812 | ctrPtColor <- "red"
813 | themeText = "black"
814 | }
815 |
816 | # Figure out which plot to show
817 | plot_circles <- circles # set default for great circle/logarithmic
818 | if(input$interpMeth == "Great Circle"){
819 | plot_coordinates <- df2$circcoords
820 | basemapcoords <- polygon_dataframe_polar$circcoords
821 | } else if(input$interpMeth == "Square Root"){
822 | plot_coordinates <- df2$sqrtcoords
823 | plot_circles <- sqrt(circles)
824 | basemapcoords <- polygon_dataframe_polar$sqrtcoords
825 | } else if(input$interpMeth == "Cube Root"){
826 | plot_coordinates <- df2$cuberootcoords
827 | basemapcoords <- polygon_dataframe_polar$cuberootcoords
828 | } else if(input$interpMeth == "Log"){
829 | plot_coordinates <- df2$logcoords
830 | basemapcoords <- polygon_dataframe_polar$logcoords
831 | } else if(input$interpMeth == "Decimal Log"){
832 | plot_coordinates <- df2$declogcoords
833 | } else if(input$interpMeth == "Custom"){
834 | plot_coordinates <- df2$customcoords
835 | basemapcoords <- polygon_dataframe_polar$customcoords
836 | plot_circles <- customcircles
837 | }
838 |
839 | polygon_dataframe_polar_list<-split(polygon_dataframe_polar, polygon_dataframe_polar$L1_Chr) # this splits into list of polygons, but some are still multipolygons (and would need to be split previously)
840 |
841 | # For all the circular plots, plug in variables
842 | if(input$interpMeth != "Lat & Long"){
843 | plot <- ggplot(df2 %>% arrange(desc(val)), aes(
844 | plot_coordinates[,1],
845 | plot_coordinates[,2],
846 | color = df2$val,
847 | stroke = 'black')) +
848 | selectedPlotTheme
849 |
850 | if(input$basemap == TRUE){
851 |
852 | if(input$plotTheme == "Light Theme"){
853 | plot$layers <- c(geom_polygon(colour = 'black', data = polygon_dataframe_polar,
854 | aes(x=basemapcoords[,1], y=basemapcoords[,2], group = L1_Chr), rule = 'winding', fill = 'gray', colour = "black", size = .2), plot$layers)
855 | # themeText = "gray60"
856 | } else if (input$plotTheme == "Dark Theme"){
857 | plot$layers <- c(geom_polygon(colour = 'black', data = polygon_dataframe_polar,
858 | aes(x=basemapcoords[,1], y=basemapcoords[,2], group = L1_Chr), rule = 'winding', fill = 'white', colour = "black", size = .2), plot$layers)
859 | } else if (input$plotTheme == "Mono Theme"){
860 | plot$layers <- c(geom_polygon(colour = 'black', data = polygon_dataframe_polar,
861 | aes(x=basemapcoords[,1], y=basemapcoords[,2], group = L1_Chr), rule = 'winding', fill = 'gray95', colour = "black", size = .2), plot$layers)
862 | }
863 | }
864 |
865 | if(input$interpMeth == "Log"){ # sneaky way to add circles below
866 | plot$layers <- c(geom_circle(aes(x0 = x0, y0 = y0, r = log(r)),
867 | colour = "black",
868 | data = plot_circles,
869 | show.legend = NA,
870 | inherit.aes = FALSE), plot$layers)
871 | }
872 | else if(input$interpMeth == "Cube Root"){ # sneaky way to add circles below
873 | plot$layers <- c(geom_circle(aes(x0 = x0, y0 = y0, r = pracma::nthroot(r, 3)),
874 | colour = circleColor,
875 | data = plot_circles,
876 | show.legend = NA,
877 | inherit.aes = FALSE), plot$layers)
878 | }
879 | else if(input$interpMeth == "Decimal Log"){ # sneaky way to add circles below
880 | plot$layers <- c(geom_circle(aes(x0 = x0, y0 = y0, r = log10(r)),
881 | colour = circleColor,
882 | data = plot_circles,
883 | show.legend = NA,
884 | inherit.aes = FALSE), plot$layers)
885 | }
886 | else{
887 | plot$layers <- c(geom_circle(aes(x0 = x0, y0 = y0, r = r),
888 | colour = circleColor,
889 | data = plot_circles,
890 | show.legend = NA,
891 | inherit.aes = FALSE), plot$layers)
892 | }
893 |
894 | if(input$labelsOn == TRUE){
895 | plot <- plot + geom_text(data = df2,
896 | aes(plot_coordinates[,1],
897 | plot_coordinates[,2],
898 | label = df2$labelName),
899 | size = 0,
900 | check_overlap = input$showAllLabels, # tried to do the text outline thing and failed. could we do a conditional or expression for text color, where depending where it is on the scale it gets a different text color?
901 | color = "white", fontface = "bold") + geom_label_repel(data = df2,
902 | aes(plot_coordinates[,1],
903 | plot_coordinates[,2],
904 | label = df2$labelName),
905 | size = input$label_size,
906 | min.segment.length = 0.75,
907 | check_overlap = input$HideOverlappingLabels,
908 | color = themeText,
909 | segment.color = 'gray20',
910 | segment.size = 0.25,
911 | alpha = 0.85, seed = 1234)
912 | # + geom_label_repel(data = df2,
913 | # aes(plot_coordinates[,1],
914 | # plot_coordinates[,2],
915 | # label = df2$labelName),
916 | # size = input$label_size,
917 | # min.segment.length = 0.75,
918 | # check_overlap = input$HideOverlappingLabels,
919 | # color = themeText,
920 | # segment.color = 'gray20',
921 | # segment.size = 0.25,
922 | # fill = NA,
923 | # alpha = 1, seed = 1234)
924 | }
925 |
926 | #if(input$centerOn == TRUE){
927 | # plot <- plot + geom_point(data = (as.data.frame(ctrPt)), aes(0, 0), colour = ctrPtColor, shape = 10, size = 3)
928 | #}
929 |
930 | plot
931 |
932 | }
933 | # Use simpler plot for Lat-Long
934 | else{
935 | plot_latLon <- ggplot(df2, aes(df2$lon, df2$lat, color = df2$val)) +
936 | geom_point() +
937 | selectedPlotTheme +
938 | geom_point(data = (as.data.frame(ctrPt)), aes(ctrPt[2], ctrPt[1]), color = ctrPtColor, shape = 10, size = 3) +
939 | scale_color_viridis_c(option = "plasma")
940 | plot_latLon
941 | }
942 |
943 | })
944 | }
945 |
946 | shinyApp(ui = ui, server = server) # Run the application
947 |
948 | #shinylive::export(appdir = "app", destdir = "docs")
949 |
950 | #httpuv::runStaticServer("docs")
951 | #install.packages('rsconnect')
952 |
953 | #rsconnect::deployApp("app",appName="rrp_beta")
954 |
--------------------------------------------------------------------------------
/app/data/IND_remittances.csv:
--------------------------------------------------------------------------------
1 | long,lat,name,IND_remit,name_long,isCTR
2 | 54.2067147616,23.8686336533,UAE,13823,United Arab Emirates,0
3 | -98.583333,39.833333,USA,11715,United States,0
4 | 44.5163637683,24.1232898391,SAU,11239,Saudi Arabia,0
5 | 47.6000988876,29.307266634,KWT,4587,Kuwait,0
6 | 51.1835025789,25.3218509742,QAT,4143,Qatar,0
7 | -2.8531353952,53.9147734805,GBR,3941,United Kingdom,0
8 | 56.09867282,20.6111743742,OMN,3250,Oman,0
9 | 84.0131736769,28.239440019,NPL,3016,Nepal,0
10 | -98.1423813721,61.4690761453,CAN,2877,Canada,0
11 | 134.5027754754,-25.7306547797,AUS,1944,Australia,0
12 | 50.583333,26.216667,BHR,1336,Bahrain,0
13 | 80.6672357493,7.7005344172,LKA,1265,Sri Lanka,0
14 | 103.833333,1.283333,SGP,886,Singapore,0
15 | 12.1407883722,42.751183053,ITA,612,Italy,0
16 | 172.7019259441,-41.6625787572,NZL,341,New Zealand,0
17 | 10.2884850927,51.1337226904,DEU,332,Germany,0
18 | 109.6981484486,3.7255884258,MYS,287,Malaysia,0
19 | -2.8805991914,42.4577181048,FRA,251,France,0
20 | 101.0061335463,15.0169749914,THA,197,Thailand,0
21 | 25.0480138799,-28.94703326,ZAF,188,South Africa,0
22 | 90.4724248062,27.4279686491,BTN,186,Bhutan,0
23 | -3.6170206024,40.3486561062,ESP,183,Spain,0
24 | 34.7529881315,-6.2577327208,TZA,153,Tanzania,0
25 | 96.5058409421,21.0169998738,MMR,138,Myanmar,0
26 | 90.2679282772,23.8394617953,BGD,126,Bangladesh,0
27 | 138.0649621327,37.6631108117,JPN,116,Japan,0
28 | 16.5962658468,62.8114849681,SWE,112,Sweden,0
29 | 8.1183006134,46.7917376837,CHE,110,Switzerland,0
30 | 5.512217101,52.2987003744,NLD,110,Netherlands,0
31 | -8.0102365449,53.18059121,IRL,100,Ireland,0
32 | 35.0038500487,31.484917815,ISR,98,Israel,0
33 | 37.7915552867,0.5959662522,KEN,86,Kenya,0
34 | 73.508889,4.175278,MDV,81,Maldives,0
35 | 4.5808315907,50.6524426065,BEL,77,Belgium,0
36 | 14.0761588843,47.6139487927,AUT,72,Austria,0
37 | 103.8836162892,36.5550685352,CHN,64,China,0
38 | 15.4681261227,69.1568563971,NOR,64,Norway,0
39 | 114.9151087739,4.6902505425,BRN,59,Brunei Darussalam,0
40 | 9.8763729377,56.0639344618,DNK,51,Denmark,0
41 | 22.7198134471,39.0667158997,GRC,43,Greece,0
42 | 57.516667,-20.166667,MUS,43,Mauritius,0
43 | 117.4234075623,-2.2217379365,IDN,42,Indonesia,0
44 | 122.9026723699,11.7637993623,PHL,42,Philippines,0
45 | -8.0557655883,39.634049775,PRT,39,Portugal,0
46 | 23.7730814658,-22.0997113788,BWA,37,Botswana,0
47 | 127.8213171283,36.4275986042,KOR,30,"Korea, Rep.",0
48 | 55.45,-4.616667,SYC,29,Seychelles,0
49 | 26.2117646974,64.5040939186,FIN,26,Finland,0
50 | 96.875223256,61.9808407507,RUS,25,Russian Federation,0
51 | 36.7794549063,31.2454905847,JOR,20,Jordan,0
52 | 17.9743527792,26.997460407,LBY,20,Libya,0
53 | -80.1091648355,8.5300193889,PAN,17,Panama,0
54 | 33.039553803,34.9070608509,CYP,16,Cyprus,0
55 | 46.6911709147,-19.3561140778,MDG,16,Madagascar,0
56 | 32.3575481537,1.2954869631,UGA,16,Uganda,0
57 | 15.3345581024,49.7752452944,CZE,12,Czech Republic,0
58 | 163.8531646446,-17.3163094264,FJI,9,Fiji,0
59 | 35.4726171541,-17.2304465978,MOZ,9,Mozambique,0
60 | 34.1936053256,-13.1728327167,MWI,9,Malawi,0
61 | -65.1753607711,-35.4468214895,ARG,8,Argentina,0
62 | 29.8444615131,26.5066199997,EGY,8,"Egypt, Arab Rep.",0
63 | 35.87098632,33.9118272078,LBN,8,Lebanon,0
64 | -77.3242548016,18.1376361279,JAM,7,Jamaica,0
65 | 27.72759194,-13.3950675201,ZMB,7,Zambia,0
66 | 19.3576286277,47.199951172,HUN,6,Hungary,0
67 | 106.2858407971,16.6579377533,VNM,6,Vietnam,0
68 | 2.5980477916,28.1854812787,DZA,5,Algeria,0
69 | 29.8626040123,15.9905850031,SDN,5,Sudan,0
70 | 30.1986175823,7.2928897148,SDS,5,South Sudan,0
71 | 31.3695330804,48.9730179682,UKR,5,Ukraine,0
72 | -53.0543400358,-10.8067736435,BRA,4,Brazil,0
73 | -1.2369685557,7.9286518131,GHA,4,Ghana,0
74 | -102.576349524,23.9353719022,MEX,4,Mexico,0
75 | 19.3110143084,52.1482602193,POL,4,Poland,0
76 | 120.9748007375,23.7409649798,TWN,4,Turkey,0
77 | -71.5206439452,-39.0470143099,CHL,3,Chile,0
78 | -9.4108361544,6.4316198623,LBR,3,Liberia,0
79 | 29.9139008931,-3.3773918124,BDI,2,"Bahamas, The",0
80 | -88.703421253,17.1970899115,BLZ,2,Belize,0
81 | -84.175423096,9.9656711275,CRI,2,Costa Rica,0
82 | -70.462358457,18.884487088,DOM,2,Dominican Republic,0
83 | -18.7610287708,65.0742763353,ISL,2,Iceland,0
84 | 71.034435049,38.5830814642,TJK,2,Tajikistan,0
85 | 9.5347161207,34.1729390369,TUN,2,Trinidad and Tobago,0
86 | 25.1951109533,42.753118762,BGR,1,Bulgaria,0
87 | -73.077732087,3.9272138627,COL,1,Colombia,0
88 | -78.3841667461,-1.4547717055,ECU,1,Ecuador,0
89 | 43.7569114187,33.036822341,IRQ,1,Iraq,0
90 | 5.9652234323,49.7657050742,LUX,1,Luxembourg,0
91 | 24.8332961498,56.8071751343,LVA,1,Latvia,0
92 | -74.3918058168,-9.1915629051,PER,1,Peru,0
93 | 145.3175746278,-6.4516445146,PNG,1,Papua New Guinea,0
94 | 127.1650167628,40.1430208608,PRK,1,"Korea, Dem. Rep.",0
95 | 29.9189658371,-2.0135155259,RWA,1,Rwanda,0
96 | 159.9666154474,-8.8524974708,SLB,1,Solomon Islands,0
97 | -11.7952574286,8.5303537262,SLE,1,Sierra Leone,0
98 | 19.5076571474,48.7267113517,SVK,1,Slovak Republic,0
99 | 14.9381523208,46.125422059,SVN,1,Slovenia,0
100 | 63.2036395282,41.7486026647,UZB,1,Uzbekistan,0
101 | -66.1638272783,7.1621322676,VEN,1,"Venezuela, RB",0
102 | 66.0866902219,33.8563992817,AFG,0,Afghanistan,0
103 | 17.4705725523,-12.2458690361,AGO,0,Angola,0
104 | 20.0324264314,41.141353306,ALB,0,Albania,0
105 | 45.000290011,40.2166076123,ARM,0,Armenia,0
106 | 47.55390959,40.2206906036,AZE,0,Azerbaijan,0
107 | 2.3373775535,9.6474307807,BEN,0,Benin,0
108 | -1.7765374521,12.3116504941,BFA,0,Burkina Faso,0
109 | 17.8168834213,44.1807678414,BIH,0,Bosnia and Herzegovina,0
110 | 27.9813539869,53.5063444048,BLR,0,Belarus,0
111 | -64.641405606,-16.7289870153,BOL,0,Bolivia,0
112 | 20.3743472912,6.5427787059,CAF,0,Central African Republic,0
113 | -5.6120436452,7.553755007,CIV,0,Cote d'Ivoire,0
114 | 12.6115525151,5.6630981303,CMR,0,Cameroon,0
115 | 23.5829558315,-2.8502757111,COD,0,"Congo, Dem. Rep.",0
116 | 15.1344617674,-0.8378010872,COG,0,"Congo, Rep.",0
117 | -78.9606849097,21.631751541,CUB,0,Cuba,0
118 | 42.498019736,11.7730443955,DJI,0,Djibouti,0
119 | 38.6781773422,15.4272756579,ERI,0,Eritrea,0
120 | 25.8247283753,58.6436952407,EST,0,Estonia,0
121 | 39.5512557929,8.6539991881,ETH,0,Ethiopia,0
122 | 11.6877511749,-0.6470481398,GAB,0,Gabon,0
123 | 43.4815404198,42.1620186998,GEO,0,Georgia,0
124 | -11.0608537412,10.4482728773,GIN,0,Guinea,0
125 | -15.4318728077,13.4753343587,GMB,0,"Gambia, The",0
126 | -15.1106237517,12.0227043823,GNB,0,Guinea-Bissau,0
127 | 10.3660313251,1.64586432,GNQ,0,Equatorial Guinea,0
128 | -41.5001811149,74.770487694,GRL,0,Greenland,0
129 | -90.3694583605,15.699360612,GTM,0,Guatemala,0
130 | -58.9712031086,4.7902253752,GUY,0,Guyana,0
131 | -86.589963838,14.8229470817,HND,0,Honduras,0
132 | 16.5661911067,45.016234368,HRV,0,Croatia,0
133 | -72.6580133054,18.9007006918,HTI,0,Haiti,0
134 | 79.5937037633,22.9250064074,IND,0,India,1
135 | 54.2854514969,32.5189173176,IRN,0,"Iran, Islamic Rep.",0
136 | 67.2846086075,48.1916620925,KAZ,0,Kazakhstan,0
137 | 74.6204048109,41.5068937132,KGZ,0,Kyrgyz Republic,0
138 | 104.8760853253,12.6847286294,KHM,0,Cambodia,0
139 | 103.750259895,18.444978089,LAO,0,Lao PDR,0
140 | 28.1701052952,-29.6252904937,LSO,0,Lesotho,0
141 | 23.8806402758,55.2843194848,LTU,0,Lithuania,0
142 | -8.4204795445,29.8853946983,MAR,0,Morocco,0
143 | 28.4104827908,47.2036764261,MDA,0,Moldova,0
144 | 21.6978968161,41.6059289308,MKD,0,"Macedonia, FYR",0
145 | -3.5432943395,17.2677720617,MLI,0,Mali,0
146 | 19.2861809672,42.7890383314,MNE,0,Montenegro,0
147 | 102.9464051863,46.8236825035,MNG,0,Mongolia,0
148 | -10.3263969252,20.2092672064,MRT,0,Mauritania,0
149 | 17.1561681262,-22.0997769317,NAM,0,Namibia,0
150 | 165.5344746009,-21.2613576125,NCL,0,New Caledonia,0
151 | 9.3244293382,17.3455523533,NER,0,Niger,0
152 | 7.9951277541,9.5483184182,NGA,0,Nigeria,0
153 | -85.0203185008,12.848190428,NIC,0,Nicaragua,0
154 | 69.4139980632,29.9734600255,PAK,0,Pakistan,0
155 | -58.3873878335,-23.2480419463,PRY,0,Paraguay,0
156 | 24.9432524946,45.8571010357,ROU,0,Romania,0
157 | -14.5098027859,14.3541399885,SEN,0,Senegal,0
158 | -88.8729031703,13.7260916258,SLV,0,El Salvador,0
159 | 45.7267007672,4.7523477565,SOM,0,Somalia,0
160 | 20.8196512674,44.2330372036,SRB,0,Serbia,0
161 | -55.9114562995,4.1200080318,SUR,0,Suriname,0
162 | 31.3952559021,-26.4898552885,SWZ,0,Swaziland,0
163 | 38.5442394196,35.0126142811,SYR,0,Syrian Arab Republic,0
164 | 18.5813295253,15.3288673998,TCD,0,Chad,0
165 | 0.9964039437,8.4395419547,TGO,0,Togo,0
166 | 59.2754302624,39.0912401802,TKM,0,Turkmenistan,0
167 | -61.3303669144,10.4282370892,TTO,0,Timor-Leste,0
168 | 35.116901308,39.0683717414,TUR,0,Tunisia,0
169 | -56.0032786665,-32.7809043652,URY,0,Uruguay,0
170 | 167.0737512682,-15.5426770576,VUT,0,Vanuatu,0
171 | 47.5350447585,15.9132319501,YEM,0,"Yemen, Rep.",0
172 | 29.7885483719,-18.9069879479,ZWE,0,Zimbabwe,0
173 |
--------------------------------------------------------------------------------
/app/data/Katrina_Migration.csv:
--------------------------------------------------------------------------------
1 | State_Abbrev,Lat,Lon,State_Name,LA_Migration_2006_ACS,Census_Pop_2005,Migration_per_100K,Is_CTR
2 | AL,32.318231,-86.902298,Alabama,10034.00,4557808.00,220,0
3 | AK,63.588753,-154.493062,Alaska,332.00,663661.00,50,0
4 | AZ,34.048928,-111.093731,Arizona,2609.00,5939292.00,44,0
5 | AR,35.20105,-91.831833,Arkansas,8216.00,2779154.00,296,0
6 | CA,36.778261,-119.417932,California,10561.00,36132147.00,29,0
7 | CO,39.550051,-105.782067,Colorado,2246.00,4665177.00,48,0
8 | CT,41.603221,-73.087749,Connecticut,269.00,3510297.00,8,0
9 | DE,38.910832,-75.52767,Delaware,136.00,843524.00,16,0
10 | DC,38.905985,-77.033418,District of Columbia,274.00,550521.00,50,0
11 | FL,27.664827,-81.515754,Florida,15995.00,17789864.00,90,0
12 | GA,32.157435,-82.907123,Georgia,19472.00,9072576.00,215,0
13 | HI,19.898682,-155.665857,Hawaii,238.00,1275194.00,19,0
14 | ID,44.068202,-114.742041,Idaho,93.00,1429096.00,7,0
15 | IL,40.633125,-89.398528,Illinois,2956.00,12763371.00,23,0
16 | IN,40.551217,-85.602364,Indiana,2506.00,6271973.00,40,0
17 | IA,41.878003,-93.097702,Iowa,1299.00,2966334.00,44,0
18 | KS,39.011902,-98.484246,Kansas,1425.00,2744687.00,52,0
19 | KY,37.839333,-84.270018,Kentucky,982.00,4173405.00,24,0
20 | LA,31.244823,-92.145024,Louisiana,0.00,4523628.00,0,1
21 | ME,45.253783,-69.445469,Maine,314.00,1321505.00,24,0
22 | MD,39.045755,-76.641271,Maryland,3975.00,5600388.00,71,0
23 | MA,42.407211,-71.382437,Massachusetts,1564.00,6398743.00,24,0
24 | MI,44.314844,-85.602364,Michigan,1784.00,10120860.00,18,0
25 | MN,46.729553,-94.6859,Minnesota,2087.00,5132799.00,41,0
26 | MS,32.354668,-89.398528,Mississippi,19184.00,2921088.00,657,0
27 | MO,37.964253,-91.831833,Missouri,4589.00,5800310.00,79,0
28 | MT,46.879682,-110.362566,Montana,203.00,935670.00,22,0
29 | NE,41.492537,-99.901813,Nebraska,547.00,1758787.00,31,0
30 | NV,38.80261,-116.419389,Nevada,1628.00,2414807.00,67,0
31 | NH,43.193852,-71.572395,New Hampshire,689.00,1309940.00,53,0
32 | NJ,40.058324,-74.405661,New Jersey,1044.00,8717925.00,12,0
33 | NM,34.97273,-105.032363,New Mexico,870.00,1928384.00,45,0
34 | NY,43.299428,-74.217933,New York,2555.00,19254630.00,13,0
35 | NC,35.759573,-79.0193,North Carolina,5627.00,8683242.00,65,0
36 | ND,47.551493,-101.002012,North Dakota,96.00,636677.00,15,0
37 | OH,40.417287,-82.907123,Ohio,3807.00,11464042.00,33,0
38 | OK,35.007752,-97.092877,Oklahoma,3122.00,3547884.00,88,0
39 | OR,43.804133,-120.554201,Oregon,1697.00,3641056.00,47,0
40 | PA,41.203322,-77.194525,Pennsylvania,1212.00,12429616.00,10,0
41 | RI,41.580095,-71.477429,Rhode Island,327.00,1076189.00,30,0
42 | SC,33.836081,-81.163725,South Carolina,2417.00,4255083.00,57,0
43 | SD,43.969515,-99.901813,South Dakota,448.00,775933.00,58,0
44 | TN,35.517491,-86.580447,Tennessee,7087.00,5962959.00,119,0
45 | TX,31.968599,-99.901813,Texas,118552.00,22859968.00,519,0
46 | UT,39.32098,-111.093731,Utah,1226.00,2469585.00,50,0
47 | VT,44.558803,-72.577841,Vermont,0.00,623050.00,0,0
48 | VA,37.431573,-78.656894,Virginia,6189.00,7567465.00,82,0
49 | WA,47.751074,-120.740139,Washington,2785.00,6287759.00,44,0
50 | WV,38.597626,-80.454903,West Virginia,429.00,1816856.00,24,0
51 | WI,43.78444,-88.787868,Wisconsin,1301.00,5536201.00,23,0
52 | WY,43.075968,-107.290284,Wyoming,432.00,509294.00,85,0
--------------------------------------------------------------------------------
/app/data/us-states.geojson:
--------------------------------------------------------------------------------
1 | {"type":"FeatureCollection","features":[
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/app/rsconnect/shinyapps.io/willbpayne/relational_reprojection_platform.dcf:
--------------------------------------------------------------------------------
1 | name: relational_reprojection_platform
2 | title:
3 | username: willbpayne
4 | account: willbpayne
5 | server: shinyapps.io
6 | hostUrl: https://api.shinyapps.io/v1
7 | appId: 12118591
8 | bundleId: 8696579
9 | url: https://willbpayne.shinyapps.io/relational_reprojection_platform/
10 | version: 1
11 |
--------------------------------------------------------------------------------
/app/rsconnect/shinyapps.io/willbpayne/rrp_beta.dcf:
--------------------------------------------------------------------------------
1 | name: rrp_beta
2 | title:
3 | username: willbpayne
4 | account: willbpayne
5 | server: shinyapps.io
6 | hostUrl: https://api.shinyapps.io/v1
7 | appId: 12123420
8 | bundleId: 8704746
9 | url: https://willbpayne.shinyapps.io/rrp_beta/
10 | version: 1
11 |
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/app/www/RRP_style.css:
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1 |
2 |
3 | h1 {
4 | font-family: 'HelveticaNeue-UltraLight', serif;
5 | font-size: 72px;
6 | }
7 |
8 | .panel {
9 | font-weight: 100;
10 | color: #404040; /* light version was 404040 */
11 | background: transparent; /* interior of side panel */
12 | }
13 |
14 | .mainP {
15 | color: #404040; /* text color in main panel */
16 | }
17 |
18 | .col-sm-4{
19 | background: transparent; /* area around side panel, but behind it */
20 | }
21 |
22 | .well{
23 | background: #F0F0F0;
24 | }
25 |
26 | .toggle { display: none; /* currently not in use */
27 | }
28 |
29 | .span3{
30 | background: purple;
31 | }
32 |
33 | body, label, input, button, select {
34 | font-family: 'HelveticaNeue', 'helvetica', monospace;
35 | }
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/docs/relationalreprojection.jpeg:
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https://raw.githubusercontent.com/willbpayne/relational_reprojection_platform/fba7a2be639e2a01364aaa2d2e7bb7a2181b6fe6/docs/relationalreprojection.jpeg
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/relational_reprojection_platform.Rproj:
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1 | Version: 1.0
2 |
3 | RestoreWorkspace: Default
4 | SaveWorkspace: Default
5 | AlwaysSaveHistory: Default
6 |
7 | EnableCodeIndexing: Yes
8 | UseSpacesForTab: Yes
9 | NumSpacesForTab: 2
10 | Encoding: UTF-8
11 |
12 | RnwWeave: Sweave
13 | LaTeX: pdfLaTeX
14 |
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/rsconnect/shinyapps.io/willbpayne/relational_reprojection_platform.dcf:
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1 | name: relational_reprojection_platform
2 | title:
3 | username: willbpayne
4 | account: willbpayne
5 | server: shinyapps.io
6 | hostUrl: https://api.shinyapps.io/v1
7 | appId: 12118591
8 | bundleId: 8696466
9 | url: https://willbpayne.shinyapps.io/relational_reprojection_platform/
10 | version: 1
11 |
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