├── .gitignore ├── LICENSE ├── README.md ├── README.rst ├── bnse ├── bnse.py └── demo.py ├── exps ├── custom_plotting.py ├── data.py ├── data │ ├── Wind_Infilled.wav │ └── Wind_Original.wav ├── fit_parametric_model.py ├── plot_saved_models.py ├── prior_posterior_kernels.py ├── regression_runner.py ├── run_with_para_models.py ├── save_models.py └── standard_gp_plots.py ├── exps_multi_input_dim ├── basic_gp_comparison.py ├── data.py ├── regression_runner.py └── utils.py ├── fx ├── data.py ├── plotting.py └── runner.py ├── notebooks ├── FKL_MultipleInputDimensions_Regression_CUDA.ipynb ├── FKL_MultipleInputDimensions_Regression_MultiGPU.ipynb └── regression_example.ipynb ├── plots ├── post-data.png ├── post-kern.png ├── prior-data.png └── prior-kern.png ├── poster.pdf ├── prcp-testing ├── data-managment │ ├── r_to_np_data.py │ └── save_prcp_data.R ├── data_getters.py ├── multitask_example.ipynb ├── plot_map.R ├── prcp_plotting.py ├── prcp_utils.py ├── run_extrapolation.py └── simple_plotter.py ├── setup.py ├── spectralgp ├── __init__.py ├── kernels │ ├── __init__.py │ ├── product_spectral_gp_kernel.py │ ├── recover_spectral_density.py │ └── spectral_gp_kernel.py ├── means │ ├── __init__.py │ └── means.py ├── models.py ├── priors.py ├── samplers │ ├── __init__.py │ ├── alternating_sampler.py │ ├── elliptical_slice.py │ ├── mean_elliptical_slice.py │ └── sgd.py ├── sampling_factories.py ├── trainer.py └── utils.py └── tests ├── testSpectralKernel.py └── test_mean_ess.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/README.md -------------------------------------------------------------------------------- /README.rst: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /bnse/bnse.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/bnse/bnse.py -------------------------------------------------------------------------------- /bnse/demo.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/bnse/demo.py -------------------------------------------------------------------------------- /exps/custom_plotting.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/custom_plotting.py -------------------------------------------------------------------------------- /exps/data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/data.py -------------------------------------------------------------------------------- /exps/data/Wind_Infilled.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/data/Wind_Infilled.wav -------------------------------------------------------------------------------- /exps/data/Wind_Original.wav: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/data/Wind_Original.wav -------------------------------------------------------------------------------- /exps/fit_parametric_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/fit_parametric_model.py -------------------------------------------------------------------------------- /exps/plot_saved_models.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/plot_saved_models.py -------------------------------------------------------------------------------- /exps/prior_posterior_kernels.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/prior_posterior_kernels.py -------------------------------------------------------------------------------- /exps/regression_runner.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/regression_runner.py -------------------------------------------------------------------------------- /exps/run_with_para_models.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/run_with_para_models.py -------------------------------------------------------------------------------- /exps/save_models.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/save_models.py -------------------------------------------------------------------------------- /exps/standard_gp_plots.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps/standard_gp_plots.py -------------------------------------------------------------------------------- /exps_multi_input_dim/basic_gp_comparison.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps_multi_input_dim/basic_gp_comparison.py -------------------------------------------------------------------------------- /exps_multi_input_dim/data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps_multi_input_dim/data.py -------------------------------------------------------------------------------- /exps_multi_input_dim/regression_runner.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps_multi_input_dim/regression_runner.py -------------------------------------------------------------------------------- /exps_multi_input_dim/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/exps_multi_input_dim/utils.py -------------------------------------------------------------------------------- /fx/data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/fx/data.py -------------------------------------------------------------------------------- /fx/plotting.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/fx/plotting.py -------------------------------------------------------------------------------- /fx/runner.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/fx/runner.py -------------------------------------------------------------------------------- /notebooks/FKL_MultipleInputDimensions_Regression_CUDA.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/notebooks/FKL_MultipleInputDimensions_Regression_CUDA.ipynb -------------------------------------------------------------------------------- /notebooks/FKL_MultipleInputDimensions_Regression_MultiGPU.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/notebooks/FKL_MultipleInputDimensions_Regression_MultiGPU.ipynb -------------------------------------------------------------------------------- /notebooks/regression_example.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/notebooks/regression_example.ipynb -------------------------------------------------------------------------------- /plots/post-data.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/plots/post-data.png -------------------------------------------------------------------------------- /plots/post-kern.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/plots/post-kern.png -------------------------------------------------------------------------------- /plots/prior-data.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/plots/prior-data.png -------------------------------------------------------------------------------- /plots/prior-kern.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/plots/prior-kern.png -------------------------------------------------------------------------------- /poster.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/poster.pdf -------------------------------------------------------------------------------- /prcp-testing/data-managment/r_to_np_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/prcp-testing/data-managment/r_to_np_data.py -------------------------------------------------------------------------------- /prcp-testing/data-managment/save_prcp_data.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/prcp-testing/data-managment/save_prcp_data.R -------------------------------------------------------------------------------- /prcp-testing/data_getters.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/prcp-testing/data_getters.py -------------------------------------------------------------------------------- /prcp-testing/multitask_example.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/prcp-testing/multitask_example.ipynb -------------------------------------------------------------------------------- /prcp-testing/plot_map.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/prcp-testing/plot_map.R -------------------------------------------------------------------------------- /prcp-testing/prcp_plotting.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/prcp-testing/prcp_plotting.py -------------------------------------------------------------------------------- /prcp-testing/prcp_utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/prcp-testing/prcp_utils.py -------------------------------------------------------------------------------- /prcp-testing/run_extrapolation.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/prcp-testing/run_extrapolation.py -------------------------------------------------------------------------------- /prcp-testing/simple_plotter.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/prcp-testing/simple_plotter.py -------------------------------------------------------------------------------- /setup.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/setup.py -------------------------------------------------------------------------------- /spectralgp/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/__init__.py -------------------------------------------------------------------------------- /spectralgp/kernels/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/kernels/__init__.py -------------------------------------------------------------------------------- /spectralgp/kernels/product_spectral_gp_kernel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/kernels/product_spectral_gp_kernel.py -------------------------------------------------------------------------------- /spectralgp/kernels/recover_spectral_density.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/kernels/recover_spectral_density.py -------------------------------------------------------------------------------- /spectralgp/kernels/spectral_gp_kernel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/kernels/spectral_gp_kernel.py -------------------------------------------------------------------------------- /spectralgp/means/__init__.py: -------------------------------------------------------------------------------- 1 | from .means import * -------------------------------------------------------------------------------- /spectralgp/means/means.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/means/means.py -------------------------------------------------------------------------------- /spectralgp/models.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/models.py -------------------------------------------------------------------------------- /spectralgp/priors.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/priors.py -------------------------------------------------------------------------------- /spectralgp/samplers/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/samplers/__init__.py -------------------------------------------------------------------------------- /spectralgp/samplers/alternating_sampler.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/samplers/alternating_sampler.py -------------------------------------------------------------------------------- /spectralgp/samplers/elliptical_slice.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/samplers/elliptical_slice.py -------------------------------------------------------------------------------- /spectralgp/samplers/mean_elliptical_slice.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/samplers/mean_elliptical_slice.py -------------------------------------------------------------------------------- /spectralgp/samplers/sgd.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/samplers/sgd.py -------------------------------------------------------------------------------- /spectralgp/sampling_factories.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/sampling_factories.py -------------------------------------------------------------------------------- /spectralgp/trainer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/trainer.py -------------------------------------------------------------------------------- /spectralgp/utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/spectralgp/utils.py -------------------------------------------------------------------------------- /tests/testSpectralKernel.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/tests/testSpectralKernel.py -------------------------------------------------------------------------------- /tests/test_mean_ess.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/wjmaddox/spectralgp/HEAD/tests/test_mean_ess.py --------------------------------------------------------------------------------