└── README.md /README.md: -------------------------------------------------------------------------------- 1 | # LearningNote 2 | > some resources on my path in deep learning and medical image analysis 3 | > 4 | ## PROGRAMMING LIBRARIES 5 | 6 | - **Deep Learning:** 7 | [DHG](https://deephypergraph.com/#/), 8 | [MONAI](https://monai.io/), 9 | [PyG](https://pyg.org/), 10 | [PyTorch](https://pytorch.org/), 11 | [PyTorch3d](https://pytorch3d.org/) 12 | 13 | - **Image Processing:** 14 | [Albumentations](https://albumentations.ai/docs/getting_started/mask_augmentation/), 15 | [ANTsPy](https://github.com/ANTsX/ANTsPy), 16 | [DIPY](https://dipy.org/), 17 | [Kornia](https://kornia.github.io//), 18 | [MedPy](https://github.com/loli/medpy), 19 | [SimpleITK](https://simpleitk.org/), 20 | [TorchIO](https://torchio.readthedocs.io/) 21 | 22 | - **Data Synthesis:** 23 | [SDV](https://github.com/sdv-dev/SDV) 24 | 25 | - **Computational Geometry:** 26 | [PyVista](https://docs.pyvista.org/), 27 | [Vedo](https://vedo.embl.es/) 28 | 29 | - **Reinforcement Learning:** 30 | [Gym](https://gym.openai.com/) 31 | 32 | - **Visualization:** 33 | [ITKWidgets](https://itkwidgets.readthedocs.io/en/latest/), 34 | [Matplotlib](https://matplotlib.org/stable/), 35 | [SciencePlots](https://github.com/garrettj403/SciencePlots), 36 | [Seaborn](https://seaborn.pydata.org/), 37 | [Statannotations](https://github.com/trevismd/statannotations) 38 | 39 | - **Monitering:** 40 | [Psutils](https://github.com/giampaolo/psutil), 41 | [WandB](https://wandb.ai/site) 42 | 43 | - **Scientific Computing:** 44 | [NumPy](https://numpy.org/), 45 | [SciPy](https://scipy.org/), 46 | [SHAP](https://shap.readthedocs.io/en/latest/) 47 | 48 | - **Acceleration:** 49 | [CuPy](https://cupy.dev/), 50 | [TensorRT](https://developer.nvidia.com/tensorrt) 51 | 52 | 53 | ## JOURNALS & CONFERENCES 54 | 55 | | Journals | IF | 56 | |:---------------------------------------------------------------|:----:| 57 | | **Nature Portfolio** | - | 58 | | Nature Medicine | 50.0 | 59 | | Nature Methods | 32.1 | 60 | | Nature Biomedical Engineering | 26.6 | 61 | | Nature Machine Intelligence | 23.9 | 62 | | Nature Communications | 15.7 | 63 | | npj Digital Medicine | 15.1 | 64 | | **IEEE** | - | 65 | | IEEE Transactions on Pattern Analysis and Machine Intelligence | 18.6 | 66 | | IEEE Transactions on Artificial Intelligence | - | 67 | | IEEE Transactions on Image Processing | 13.7 | 68 | | IEEE Transactions on Cybernetics | 10.5 | 69 | | IEEE Transactions on Industrial Informatics | 9.9 | 70 | | IEEE Transactions on Medical Imaging | 9.8 | 71 | | IEEE Transactions on Neural Networks and Learning Systems | 8.9 | 72 | | IEEE Journal of Biomedical And Health Informatics | 6.8 | 73 | | IEEE Transactions on Instrumentation and Measurement | 5.6 | 74 | | IEEE Transactions on Biomedical Engineering | 4.5 | 75 | | **Elsevier** | - | 76 | | Medical Image Analysis | 11.8 | 77 | | Pattern Recognition | 7.6 | 78 | | Computers in Biology and Medicine | 6.3 | 79 | | Neural Networks | 6.3 | 80 | | Artificial Intelligence in Medicine | 6.2 | 81 | | Computer Methods and Programs in Biomedicine | 4.8 | 82 | | **Lancet** | - | 83 | | Lancet Digital Health | 24.1 | 84 | | eClinicalMedicine | 10.0 | 85 | | **RSNA** | - | 86 | | Radiology | 15.2 | 87 | | Radiology: Artificial Intelligence | 13.2 | 88 | | **Springer Link** | - | 89 | | International Journal of Computer Vision | 9.3 | 90 | | European Radiology | 4.7 | 91 | | **Others** | - | 92 | | JACC - Cardiovascular Imaging | 15.2 | 93 | | European Heart Journal - Cardiovascular Imaging | 6.7 | 94 | | European Heart Journal - Digital Health | 4.4 | 95 | | Progress in Biomedical Engineering | 5.0 | 96 | | **Clinical Journal** | - | 97 | | Lancet | 88.5 | 98 | | New England Journal of Medicine | 78.5 | 99 | | Journal of the American Medical Association | 55.0 | 100 | | British Medical Journal | 42.7 | 101 | | Circulation | 38.6 | 102 | | European Heart Journal | 35.6 | 103 | 104 | 105 | 106 | 107 | | Conference | Abbr | 108 | |:---------------------------------------------------------------------------------------|:--------| 109 | | AAAI Conference on Artificial Intelligence | AAAI | 110 | | ACM International Conference on Multimedia | ACM MM | 111 | | Conference on Computer Vision and Pattern Recognition | CVPR | 112 | | Conference on Neural Information Processing Systems | NeurIPS | 113 | | European Conference on Computer Vision | ECCV | 114 | | International Conference on Computer Vision | ICCV | 115 | | International Conference on Learning Representations | ICLR | 116 | | International Conference on Machine Learning | ICML | 117 | | International Conference on Medical Image Computing and Computer Assisted Intervention | MICCAI | 118 | | International Joint Conference on Artificial Intelligence | IJCAI | 119 | | International Symposium on Biomedical Imaging | ISBI | 120 | | Medical Imaging with Deep Learning | MIDL | 121 | 122 | 123 | 124 | 125 | --------------------------------------------------------------------------------