├── .gitignore ├── README-zh.md ├── README.md ├── assets ├── dinounet.jpg ├── extending.md └── extending_zh.md ├── dinounet ├── __init__.py ├── __pycache__ │ ├── __init__.cpython-310.pyc │ ├── __init__.cpython-312.pyc │ ├── api.cpython-310.pyc │ ├── api.cpython-312.pyc │ ├── configuration.cpython-310.pyc │ ├── configuration.cpython-312.pyc │ ├── paths.cpython-310.pyc │ └── paths.cpython-312.pyc ├── api.py ├── configuration.py ├── dinov3 │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ └── __init__.cpython-312.pyc │ ├── checkpointer │ │ ├── __init__.py │ │ └── checkpointer.py │ ├── configs │ │ ├── __init__.py │ │ ├── config.py │ │ ├── ssl_default_config.yaml │ │ └── train │ │ │ ├── dinov3_vit7b16_gram_anchor.yaml │ │ │ ├── dinov3_vit7b16_high_res_adapt.yaml │ │ │ ├── dinov3_vit7b16_pretrain.yaml │ │ │ ├── dinov3_vitl16_lvd1689m_distilled.yaml │ │ │ ├── multi_distillation_test.yaml │ │ │ ├── multidist_tests │ │ │ ├── vitb_p16.yaml │ │ │ └── vits_p16.yaml │ │ │ └── vitl_im1k_lin834.yaml │ ├── data │ │ ├── __init__.py │ │ ├── adapters.py │ │ ├── augmentations.py │ │ ├── collate.py │ │ ├── datasets │ │ │ ├── __init__.py │ │ │ ├── ade20k.py │ │ │ ├── coco_captions.py │ │ │ ├── decoders.py │ │ │ ├── extended.py │ │ │ ├── image_net.py │ │ │ └── image_net_22k.py │ │ ├── loaders.py │ │ ├── masking.py │ │ ├── meta_loaders.py │ │ ├── samplers.py │ │ └── transforms.py │ ├── distributed │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── torch_distributed_primitives.cpython-310.pyc │ │ │ ├── torch_distributed_primitives.cpython-312.pyc │ │ │ ├── torch_distributed_wrapper.cpython-310.pyc │ │ │ └── torch_distributed_wrapper.cpython-312.pyc │ │ ├── torch_distributed_primitives.py │ │ └── torch_distributed_wrapper.py │ ├── env │ │ └── __init__.py │ ├── eval │ │ ├── accumulators.py │ │ ├── data.py │ │ ├── dense │ │ │ └── depth │ │ │ │ ├── models │ │ │ │ ├── __init__.py │ │ │ │ ├── dpt_head.py │ │ │ │ ├── embed.py │ │ │ │ └── encoder.py │ │ │ │ └── utils.py │ │ ├── detection │ │ │ ├── config.py │ │ │ ├── models │ │ │ │ ├── __init__.py │ │ │ │ ├── backbone.py │ │ │ │ ├── detr.py │ │ │ │ ├── global_ape_decoder.py │ │ │ │ ├── global_rpe_decomp_decoder.py │ │ │ │ ├── position_encoding.py │ │ │ │ ├── transformer.py │ │ │ │ ├── transformer_encoder.py │ │ │ │ ├── utils.py │ │ │ │ └── windows.py │ │ │ └── util │ │ │ │ ├── __init__.py │ │ │ │ ├── box_ops.py │ │ │ │ └── misc.py │ │ ├── helpers.py │ │ ├── knn.py │ │ ├── linear.py │ │ ├── log_regression.py │ │ ├── metrics │ │ │ ├── __init__.py │ │ │ ├── classification.py │ │ │ └── imagenet_c.py │ │ ├── results.py │ │ ├── segmentation │ │ │ ├── inference.py │ │ │ └── models │ │ │ │ ├── __init__.py │ │ │ │ ├── __pycache__ │ │ │ │ ├── __init__.cpython-310.pyc │ │ │ │ └── __init__.cpython-312.pyc │ │ │ │ ├── backbone │ │ │ │ ├── __pycache__ │ │ │ │ │ ├── dinov3_adapter.cpython-310.pyc │ │ │ │ │ └── dinov3_adapter.cpython-312.pyc │ │ │ │ └── dinov3_adapter.py │ │ │ │ ├── heads │ │ │ │ ├── __init__.py │ │ │ │ ├── __pycache__ │ │ │ │ │ ├── __init__.cpython-310.pyc │ │ │ │ │ ├── __init__.cpython-312.pyc │ │ │ │ │ ├── mask2former_head.cpython-310.pyc │ │ │ │ │ ├── mask2former_head.cpython-312.pyc │ │ │ │ │ ├── mask2former_transformer_decoder.cpython-310.pyc │ │ │ │ │ ├── mask2former_transformer_decoder.cpython-312.pyc │ │ │ │ │ ├── pixel_decoder.cpython-310.pyc │ │ │ │ │ └── pixel_decoder.cpython-312.pyc │ │ │ │ ├── mask2former_head.py │ │ │ │ ├── mask2former_transformer_decoder.py │ │ │ │ └── pixel_decoder.py │ │ │ │ └── utils │ │ │ │ ├── __pycache__ │ │ │ │ ├── batch_norm.cpython-310.pyc │ │ │ │ ├── batch_norm.cpython-312.pyc │ │ │ │ ├── ms_deform_attn.cpython-310.pyc │ │ │ │ ├── ms_deform_attn.cpython-312.pyc │ │ │ │ ├── position_encoding.cpython-310.pyc │ │ │ │ ├── position_encoding.cpython-312.pyc │ │ │ │ ├── transformer.cpython-310.pyc │ │ │ │ └── transformer.cpython-312.pyc │ │ │ │ ├── batch_norm.py │ │ │ │ ├── ms_deform_attn.py │ │ │ │ ├── ops │ │ │ │ ├── MultiScaleDeformableAttention.egg-info │ │ │ │ │ ├── PKG-INFO │ │ │ │ │ ├── SOURCES.txt │ │ │ │ │ ├── dependency_links.txt │ │ │ │ │ └── top_level.txt │ │ │ │ ├── build │ │ │ │ │ ├── lib.linux-x86_64-cpython-312 │ │ │ │ │ │ ├── MultiScaleDeformableAttention.cpython-312-x86_64-linux-gnu.so │ │ │ │ │ │ ├── functions │ │ │ │ │ │ │ ├── __init__.py │ │ │ │ │ │ │ └── ms_deform_attn_func.py │ │ │ │ │ │ └── modules │ │ │ │ │ │ │ ├── __init__.py │ │ │ │ │ │ │ └── ms_deform_attn.py │ │ │ │ │ └── temp.linux-x86_64-cpython-312 │ │ │ │ │ │ └── inspire │ │ │ │ │ │ └── hdd │ │ │ │ │ │ └── global_user │ │ │ │ │ │ └── gaoyifan-240107100014 │ │ │ │ │ │ └── dinounet │ │ │ │ │ │ └── dinounet │ │ │ │ │ │ └── dinov3 │ │ │ │ │ │ └── eval │ │ │ │ │ │ └── segmentation │ │ │ │ │ │ └── models │ │ │ │ │ │ └── utils │ │ │ │ │ │ └── ops │ │ │ │ │ │ └── src │ │ │ │ │ │ ├── cpu │ │ │ │ │ │ └── ms_deform_attn_cpu.o │ │ │ │ │ │ ├── cuda │ │ │ │ │ │ └── ms_deform_attn_cuda.o │ │ │ │ │ │ └── vision.o │ │ │ │ ├── functions │ │ │ │ │ ├── __init__.py │ │ │ │ │ └── ms_deform_attn_func.py │ │ │ │ ├── modules │ │ │ │ │ ├── __init__.py │ │ │ │ │ └── ms_deform_attn.py │ │ │ │ ├── setup.py │ │ │ │ ├── src │ │ │ │ │ ├── cpu │ │ │ │ │ │ ├── ms_deform_attn_cpu.cpp │ │ │ │ │ │ └── ms_deform_attn_cpu.h │ │ │ │ │ ├── cuda │ │ │ │ │ │ ├── ms_deform_attn_cuda.cu │ │ │ │ │ │ ├── ms_deform_attn_cuda.h │ │ │ │ │ │ └── ms_deform_im2col_cuda.cuh │ │ │ │ │ ├── ms_deform_attn.h │ │ │ │ │ └── vision.cpp │ │ │ │ └── test.py │ │ │ │ ├── position_encoding.py │ │ │ │ └── transformer.py │ │ ├── setup.py │ │ ├── text │ │ │ ├── ac_comp_parallelize.py │ │ │ ├── build_dinotxt.py │ │ │ ├── clip_loss.py │ │ │ ├── configs │ │ │ │ ├── dinov3_vitl_text.yaml │ │ │ │ └── text_backbone.yaml │ │ │ ├── dinotxt_model.py │ │ │ ├── gram_loss.py │ │ │ ├── text_tower.py │ │ │ ├── text_transformer.py │ │ │ ├── tokenizer.py │ │ │ ├── train_dinotxt.py │ │ │ └── vision_tower.py │ │ └── utils.py │ ├── fsdp │ │ └── ac_compile_parallelize.py │ ├── hub │ │ ├── __pycache__ │ │ │ ├── backbones.cpython-310.pyc │ │ │ ├── backbones.cpython-312.pyc │ │ │ ├── utils.cpython-310.pyc │ │ │ └── utils.cpython-312.pyc │ │ ├── backbones.py │ │ ├── classifiers.py │ │ ├── depthers.py │ │ ├── detectors.py │ │ ├── dinotxt.py │ │ ├── segmentors.py │ │ └── utils.py │ ├── layers │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── attention.cpython-310.pyc │ │ │ ├── attention.cpython-312.pyc │ │ │ ├── block.cpython-310.pyc │ │ │ ├── block.cpython-312.pyc │ │ │ ├── ffn_layers.cpython-310.pyc │ │ │ ├── ffn_layers.cpython-312.pyc │ │ │ ├── fp8_linear.cpython-310.pyc │ │ │ ├── fp8_linear.cpython-312.pyc │ │ │ ├── layer_scale.cpython-310.pyc │ │ │ ├── layer_scale.cpython-312.pyc │ │ │ ├── patch_embed.cpython-310.pyc │ │ │ ├── patch_embed.cpython-312.pyc │ │ │ ├── rms_norm.cpython-310.pyc │ │ │ ├── rms_norm.cpython-312.pyc │ │ │ ├── rope_position_encoding.cpython-310.pyc │ │ │ └── rope_position_encoding.cpython-312.pyc │ │ ├── attention.py │ │ ├── block.py │ │ ├── dino_head.py │ │ ├── ffn_layers.py │ │ ├── fp8_linear.py │ │ ├── layer_scale.py │ │ ├── patch_embed.py │ │ ├── rms_norm.py │ │ ├── rope_position_encoding.py │ │ └── sparse_linear.py │ ├── logging │ │ ├── __init__.py │ │ └── helpers.py │ ├── loss │ │ ├── __init__.py │ │ ├── dino_clstoken_loss.py │ │ ├── gram_loss.py │ │ ├── ibot_patch_loss.py │ │ └── koleo_loss.py │ ├── models │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── vision_transformer.cpython-310.pyc │ │ │ └── vision_transformer.cpython-312.pyc │ │ ├── convnext.py │ │ └── vision_transformer.py │ ├── run │ │ ├── init.py │ │ └── submit.py │ ├── thirdparty │ │ └── CLIP │ │ │ └── clip │ │ │ └── simple_tokenizer.py │ ├── train │ │ ├── __init__.py │ │ ├── cosine_lr_scheduler.py │ │ ├── multidist_meta_arch.py │ │ ├── param_groups.py │ │ ├── ssl_meta_arch.py │ │ └── train.py │ └── utils │ │ ├── __init__.py │ │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── dtype.cpython-310.pyc │ │ ├── dtype.cpython-312.pyc │ │ ├── utils.cpython-310.pyc │ │ └── utils.cpython-312.pyc │ │ ├── cluster.py │ │ ├── custom_callable.py │ │ ├── dtype.py │ │ └── utils.py ├── ensembling │ ├── __init__.py │ └── ensemble.py ├── evaluation │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── evaluate_predictions.cpython-310.pyc │ │ └── evaluate_predictions.cpython-312.pyc │ ├── accumulate_cv_results.py │ ├── evaluate_predictions.py │ └── find_best_configuration.py ├── experiment_planning │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── plan_and_preprocess_api.cpython-310.pyc │ │ ├── plan_and_preprocess_api.cpython-312.pyc │ │ ├── verify_dataset_integrity.cpython-310.pyc │ │ └── verify_dataset_integrity.cpython-312.pyc │ ├── dataset_fingerprint │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── fingerprint_extractor.cpython-310.pyc │ │ │ └── fingerprint_extractor.cpython-312.pyc │ │ └── fingerprint_extractor.py │ ├── experiment_planners │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── default_experiment_planner.cpython-310.pyc │ │ │ ├── default_experiment_planner.cpython-312.pyc │ │ │ ├── network_topology.cpython-310.pyc │ │ │ └── network_topology.cpython-312.pyc │ │ ├── default_experiment_planner.py │ │ ├── network_topology.py │ │ ├── readme.md │ │ └── resencUNet_planner.py │ ├── plan_and_preprocess_api.py │ ├── plan_and_preprocess_entrypoints.py │ ├── plans_for_pretraining │ │ ├── __init__.py │ │ └── move_plans_between_datasets.py │ └── verify_dataset_integrity.py ├── imageio │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── base_reader_writer.cpython-310.pyc │ │ ├── base_reader_writer.cpython-312.pyc │ │ ├── natural_image_reader_writer.cpython-310.pyc │ │ ├── natural_image_reader_writer.cpython-312.pyc │ │ ├── nibabel_reader_writer.cpython-310.pyc │ │ ├── nibabel_reader_writer.cpython-312.pyc │ │ ├── reader_writer_registry.cpython-310.pyc │ │ ├── reader_writer_registry.cpython-312.pyc │ │ ├── simpleitk_reader_writer.cpython-310.pyc │ │ ├── simpleitk_reader_writer.cpython-312.pyc │ │ ├── tif_reader_writer.cpython-310.pyc │ │ └── tif_reader_writer.cpython-312.pyc │ ├── base_reader_writer.py │ ├── natural_image_reader_writer.py │ ├── nibabel_reader_writer.py │ ├── reader_writer_registry.py │ ├── readme.md │ ├── simpleitk_reader_writer.py │ └── tif_reader_writer.py ├── inference │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── data_iterators.cpython-310.pyc │ │ ├── data_iterators.cpython-312.pyc │ │ ├── export_prediction.cpython-310.pyc │ │ ├── export_prediction.cpython-312.pyc │ │ ├── predict_from_raw_data.cpython-310.pyc │ │ ├── predict_from_raw_data.cpython-312.pyc │ │ ├── sliding_window_prediction.cpython-310.pyc │ │ └── sliding_window_prediction.cpython-312.pyc │ ├── data_iterators.py │ ├── examples.py │ ├── export_prediction.py │ ├── predict_from_raw_data.py │ ├── readme.md │ └── sliding_window_prediction.py ├── network_architecture │ └── utils.py ├── paths.py ├── postprocessing │ ├── __init__.py │ └── remove_connected_components.py ├── preprocessing │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ └── __init__.cpython-312.pyc │ ├── cropping │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── cropping.cpython-310.pyc │ │ │ └── cropping.cpython-312.pyc │ │ └── cropping.py │ ├── normalization │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── default_normalization_schemes.cpython-310.pyc │ │ │ ├── default_normalization_schemes.cpython-312.pyc │ │ │ ├── map_channel_name_to_normalization.cpython-310.pyc │ │ │ └── map_channel_name_to_normalization.cpython-312.pyc │ │ ├── default_normalization_schemes.py │ │ ├── map_channel_name_to_normalization.py │ │ └── readme.md │ ├── preprocessors │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── default_preprocessor.cpython-310.pyc │ │ │ └── default_preprocessor.cpython-312.pyc │ │ └── default_preprocessor.py │ └── resampling │ │ ├── __init__.py │ │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── default_resampling.cpython-310.pyc │ │ ├── default_resampling.cpython-312.pyc │ │ ├── utils.cpython-310.pyc │ │ └── utils.cpython-312.pyc │ │ ├── default_resampling.py │ │ └── utils.py ├── run │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── load_pretrained_weights.cpython-310.pyc │ │ ├── load_pretrained_weights.cpython-312.pyc │ │ ├── run_training.cpython-310.pyc │ │ └── run_training.cpython-312.pyc │ ├── load_pretrained_weights.py │ └── run_training.py ├── training │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ └── __init__.cpython-312.pyc │ ├── data_augmentation │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── compute_initial_patch_size.cpython-310.pyc │ │ │ └── compute_initial_patch_size.cpython-312.pyc │ │ ├── compute_initial_patch_size.py │ │ └── custom_transforms │ │ │ ├── __init__.py │ │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── cascade_transforms.cpython-310.pyc │ │ │ ├── cascade_transforms.cpython-312.pyc │ │ │ ├── deep_supervision_donwsampling.cpython-310.pyc │ │ │ ├── deep_supervision_donwsampling.cpython-312.pyc │ │ │ ├── limited_length_multithreaded_augmenter.cpython-310.pyc │ │ │ ├── limited_length_multithreaded_augmenter.cpython-312.pyc │ │ │ ├── masking.cpython-310.pyc │ │ │ ├── masking.cpython-312.pyc │ │ │ ├── region_based_training.cpython-310.pyc │ │ │ ├── region_based_training.cpython-312.pyc │ │ │ ├── transforms_for_dummy_2d.cpython-310.pyc │ │ │ └── transforms_for_dummy_2d.cpython-312.pyc │ │ │ ├── cascade_transforms.py │ │ │ ├── deep_supervision_donwsampling.py │ │ │ ├── limited_length_multithreaded_augmenter.py │ │ │ ├── manipulating_data_dict.py │ │ │ ├── masking.py │ │ │ ├── region_based_training.py │ │ │ └── transforms_for_dummy_2d.py │ ├── dataloading │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── base_data_loader.cpython-310.pyc │ │ │ ├── base_data_loader.cpython-312.pyc │ │ │ ├── data_loader_2d.cpython-310.pyc │ │ │ ├── data_loader_2d.cpython-312.pyc │ │ │ ├── data_loader_3d.cpython-310.pyc │ │ │ ├── data_loader_3d.cpython-312.pyc │ │ │ ├── nnunet_dataset.cpython-310.pyc │ │ │ ├── nnunet_dataset.cpython-312.pyc │ │ │ ├── utils.cpython-310.pyc │ │ │ └── utils.cpython-312.pyc │ │ ├── base_data_loader.py │ │ ├── data_loader.py │ │ ├── data_loader_2d.py │ │ ├── data_loader_3d.py │ │ ├── nnunet_dataset.py │ │ ├── nnunet_dataset_v1.py │ │ └── utils.py │ ├── logging │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── nnunet_logger.cpython-310.pyc │ │ │ └── nnunet_logger.cpython-312.pyc │ │ └── nnunet_logger.py │ ├── loss │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── compound_losses.cpython-310.pyc │ │ │ ├── compound_losses.cpython-312.pyc │ │ │ ├── deep_supervision.cpython-310.pyc │ │ │ ├── deep_supervision.cpython-312.pyc │ │ │ ├── dice.cpython-310.pyc │ │ │ ├── dice.cpython-312.pyc │ │ │ ├── robust_ce_loss.cpython-310.pyc │ │ │ └── robust_ce_loss.cpython-312.pyc │ │ ├── compound_losses.py │ │ ├── deep_supervision.py │ │ ├── dice.py │ │ └── robust_ce_loss.py │ ├── lr_scheduler │ │ ├── __init__.py │ │ ├── __pycache__ │ │ │ ├── __init__.cpython-310.pyc │ │ │ ├── __init__.cpython-312.pyc │ │ │ ├── polylr.cpython-310.pyc │ │ │ └── polylr.cpython-312.pyc │ │ └── polylr.py │ └── nnUNetTrainer │ │ ├── __init__.py │ │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── nnUNetTrainer.cpython-310.pyc │ │ ├── nnUNetTrainer.cpython-312.pyc │ │ ├── nnUNetTrainerNoDeepSupervision.cpython-310.pyc │ │ └── nnUNetTrainerNoDeepSupervision.cpython-312.pyc │ │ ├── nnUNetTrainer.py │ │ ├── nnUNetTrainerNoDeepSupervision.py │ │ └── nnUNetTrainer_Xepochs.py └── utilities │ ├── __init__.py │ ├── __pycache__ │ ├── __init__.cpython-310.pyc │ ├── __init__.cpython-312.pyc │ ├── collate_outputs.cpython-310.pyc │ ├── collate_outputs.cpython-312.pyc │ ├── crossval_split.cpython-310.pyc │ ├── crossval_split.cpython-312.pyc │ ├── dataset_name_id_conversion.cpython-310.pyc │ ├── dataset_name_id_conversion.cpython-312.pyc │ ├── ddp_allgather.cpython-310.pyc │ ├── ddp_allgather.cpython-312.pyc │ ├── default_n_proc_DA.cpython-310.pyc │ ├── default_n_proc_DA.cpython-312.pyc │ ├── file_path_utilities.cpython-310.pyc │ ├── file_path_utilities.cpython-312.pyc │ ├── find_class_by_name.cpython-310.pyc │ ├── find_class_by_name.cpython-312.pyc │ ├── get_network_from_plans.cpython-310.pyc │ ├── get_network_from_plans.cpython-312.pyc │ ├── helpers.cpython-310.pyc │ ├── helpers.cpython-312.pyc │ ├── json_export.cpython-310.pyc │ ├── json_export.cpython-312.pyc │ ├── utils.cpython-310.pyc │ └── utils.cpython-312.pyc │ ├── collate_outputs.py │ ├── crossval_split.py │ ├── dataset_name_id_conversion.py │ ├── ddp_allgather.py │ ├── default_n_proc_DA.py │ ├── file_path_utilities.py │ ├── find_class_by_name.py │ ├── get_network_from_plans.py │ ├── helpers.py │ ├── json_export.py │ ├── label_handling │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── label_handling.cpython-310.pyc │ │ └── label_handling.cpython-312.pyc │ └── label_handling.py │ ├── network_initialization.py │ ├── overlay_plots.py │ ├── plans_handling │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-310.pyc │ │ ├── __init__.cpython-312.pyc │ │ ├── plans_handler.cpython-310.pyc │ │ └── plans_handler.cpython-312.pyc │ └── plans_handler.py │ └── utils.py ├── dinounet_training.py └── requirements.txt /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/yifangao112/DinoUNet/HEAD/.gitignore -------------------------------------------------------------------------------- /README-zh.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/yifangao112/DinoUNet/HEAD/README-zh.md 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