├── .github └── workflows │ ├── build.yml │ └── zarr-dev.yml ├── .gitignore ├── Dockerfile ├── LICENSE ├── Makefile ├── README.md ├── data └── reference_image.png ├── doc └── development_overview.md ├── environment.yml ├── examples ├── z5py.n5 │ ├── attributes.json │ ├── gzip │ │ ├── 0 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ ├── 1 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ ├── 2 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ ├── 2 │ │ │ │ ├── 3 │ │ │ │ ├── 4 │ │ │ │ └── 5 │ │ └── attributes.json │ └── raw │ │ ├── 0 │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 1 │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 2 │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ ├── 2 │ │ │ ├── 3 │ │ │ ├── 4 │ │ │ └── 5 │ │ └── attributes.json ├── zarr.zr │ ├── .zgroup │ ├── blosc │ │ ├── .zarray │ │ ├── 0.0.0 │ │ ├── 0.0.1 │ │ ├── 0.0.2 │ │ ├── 0.1.0 │ │ ├── 0.1.1 │ │ ├── 0.1.2 │ │ ├── 0.2.0 │ │ ├── 0.2.1 │ │ ├── 0.2.2 │ │ ├── 0.3.0 │ │ ├── 0.3.1 │ │ ├── 0.3.2 │ │ ├── 0.4.0 │ │ ├── 0.4.1 │ │ ├── 0.4.2 │ │ ├── 0.5.0 │ │ ├── 0.5.1 │ │ ├── 0.5.2 │ │ ├── 1.0.0 │ │ ├── 1.0.1 │ │ ├── 1.0.2 │ │ ├── 1.1.0 │ │ ├── 1.1.1 │ │ ├── 1.1.2 │ │ ├── 1.2.0 │ │ ├── 1.2.1 │ │ ├── 1.2.2 │ │ ├── 1.3.0 │ │ ├── 1.3.1 │ │ ├── 1.3.2 │ │ ├── 1.4.0 │ │ ├── 1.4.1 │ │ ├── 1.4.2 │ │ ├── 1.5.0 │ │ ├── 1.5.1 │ │ ├── 1.5.2 │ │ ├── 2.0.0 │ │ ├── 2.0.1 │ │ ├── 2.0.2 │ │ ├── 2.1.0 │ │ ├── 2.1.1 │ │ ├── 2.1.2 │ │ ├── 2.2.0 │ │ ├── 2.2.1 │ │ ├── 2.2.2 │ │ ├── 2.3.0 │ │ ├── 2.3.1 │ │ ├── 2.3.2 │ │ ├── 2.4.0 │ │ ├── 2.4.1 │ │ ├── 2.4.2 │ │ ├── 2.5.0 │ │ ├── 2.5.1 │ │ ├── 2.5.2 │ │ ├── 3.0.0 │ │ ├── 3.0.1 │ │ ├── 3.0.2 │ │ ├── 3.1.0 │ │ ├── 3.1.1 │ │ ├── 3.1.2 │ │ ├── 3.2.0 │ │ ├── 3.2.1 │ │ ├── 3.2.2 │ │ ├── 3.3.0 │ │ ├── 3.3.1 │ │ ├── 3.3.2 │ │ ├── 3.4.0 │ │ ├── 3.4.1 │ │ ├── 3.4.2 │ │ ├── 3.5.0 │ │ ├── 3.5.1 │ │ ├── 3.5.2 │ │ ├── 4.0.0 │ │ ├── 4.0.1 │ │ ├── 4.0.2 │ │ ├── 4.1.0 │ │ ├── 4.1.1 │ │ ├── 4.1.2 │ │ ├── 4.2.0 │ │ ├── 4.2.1 │ │ ├── 4.2.2 │ │ ├── 4.3.0 │ │ ├── 4.3.1 │ │ ├── 4.3.2 │ │ ├── 4.4.0 │ │ ├── 4.4.1 │ │ ├── 4.4.2 │ │ ├── 4.5.0 │ │ ├── 4.5.1 │ │ ├── 4.5.2 │ │ ├── 5.0.0 │ │ ├── 5.0.1 │ │ ├── 5.0.2 │ │ ├── 5.1.0 │ │ ├── 5.1.1 │ │ ├── 5.1.2 │ │ ├── 5.2.0 │ │ ├── 5.2.1 │ │ ├── 5.2.2 │ │ ├── 5.3.0 │ │ ├── 5.3.1 │ │ ├── 5.3.2 │ │ ├── 5.4.0 │ │ ├── 5.4.1 │ │ ├── 5.4.2 │ │ ├── 5.5.0 │ │ ├── 5.5.1 │ │ └── 5.5.2 │ ├── gzip │ │ ├── .zarray │ │ ├── 0.0.0 │ │ ├── 0.0.1 │ │ ├── 0.0.2 │ │ ├── 0.1.0 │ │ ├── 0.1.1 │ │ ├── 0.1.2 │ │ ├── 0.2.0 │ │ ├── 0.2.1 │ │ ├── 0.2.2 │ │ ├── 0.3.0 │ │ ├── 0.3.1 │ │ ├── 0.3.2 │ │ ├── 0.4.0 │ │ ├── 0.4.1 │ │ ├── 0.4.2 │ │ ├── 0.5.0 │ │ ├── 0.5.1 │ │ ├── 0.5.2 │ │ ├── 1.0.0 │ │ ├── 1.0.1 │ │ ├── 1.0.2 │ │ ├── 1.1.0 │ │ ├── 1.1.1 │ │ ├── 1.1.2 │ │ ├── 1.2.0 │ │ ├── 1.2.1 │ │ ├── 1.2.2 │ │ ├── 1.3.0 │ │ ├── 1.3.1 │ │ ├── 1.3.2 │ │ ├── 1.4.0 │ │ ├── 1.4.1 │ │ ├── 1.4.2 │ │ ├── 1.5.0 │ │ ├── 1.5.1 │ │ ├── 1.5.2 │ │ ├── 2.0.0 │ │ ├── 2.0.1 │ │ ├── 2.0.2 │ │ ├── 2.1.0 │ │ ├── 2.1.1 │ │ ├── 2.1.2 │ │ ├── 2.2.0 │ │ ├── 2.2.1 │ │ ├── 2.2.2 │ │ ├── 2.3.0 │ │ ├── 2.3.1 │ │ ├── 2.3.2 │ │ ├── 2.4.0 │ │ ├── 2.4.1 │ │ ├── 2.4.2 │ │ ├── 2.5.0 │ │ ├── 2.5.1 │ │ ├── 2.5.2 │ │ ├── 3.0.0 │ │ ├── 3.0.1 │ │ ├── 3.0.2 │ │ ├── 3.1.0 │ │ ├── 3.1.1 │ │ ├── 3.1.2 │ │ ├── 3.2.0 │ │ ├── 3.2.1 │ │ ├── 3.2.2 │ │ ├── 3.3.0 │ │ ├── 3.3.1 │ │ ├── 3.3.2 │ │ ├── 3.4.0 │ │ ├── 3.4.1 │ │ ├── 3.4.2 │ │ ├── 3.5.0 │ │ ├── 3.5.1 │ │ ├── 3.5.2 │ │ ├── 4.0.0 │ │ ├── 4.0.1 │ │ ├── 4.0.2 │ │ ├── 4.1.0 │ │ ├── 4.1.1 │ │ ├── 4.1.2 │ │ ├── 4.2.0 │ │ ├── 4.2.1 │ │ ├── 4.2.2 │ │ ├── 4.3.0 │ │ ├── 4.3.1 │ │ ├── 4.3.2 │ │ ├── 4.4.0 │ │ ├── 4.4.1 │ │ ├── 4.4.2 │ │ ├── 4.5.0 │ │ ├── 4.5.1 │ │ ├── 4.5.2 │ │ ├── 5.0.0 │ │ ├── 5.0.1 │ │ ├── 5.0.2 │ │ ├── 5.1.0 │ │ ├── 5.1.1 │ │ ├── 5.1.2 │ │ ├── 5.2.0 │ │ ├── 5.2.1 │ │ ├── 5.2.2 │ │ ├── 5.3.0 │ │ ├── 5.3.1 │ │ ├── 5.3.2 │ │ ├── 5.4.0 │ │ ├── 5.4.1 │ │ ├── 5.4.2 │ │ ├── 5.5.0 │ │ ├── 5.5.1 │ │ └── 5.5.2 │ ├── raw │ │ ├── .zarray │ │ ├── 0.0.0 │ │ ├── 0.0.1 │ │ ├── 0.0.2 │ │ ├── 0.1.0 │ │ ├── 0.1.1 │ │ ├── 0.1.2 │ │ ├── 0.2.0 │ │ ├── 0.2.1 │ │ ├── 0.2.2 │ │ ├── 0.3.0 │ │ ├── 0.3.1 │ │ ├── 0.3.2 │ │ ├── 0.4.0 │ │ ├── 0.4.1 │ │ ├── 0.4.2 │ │ ├── 0.5.0 │ │ ├── 0.5.1 │ │ ├── 0.5.2 │ │ ├── 1.0.0 │ │ ├── 1.0.1 │ │ ├── 1.0.2 │ │ ├── 1.1.0 │ │ ├── 1.1.1 │ │ ├── 1.1.2 │ │ ├── 1.2.0 │ │ ├── 1.2.1 │ │ ├── 1.2.2 │ │ ├── 1.3.0 │ │ ├── 1.3.1 │ │ ├── 1.3.2 │ │ ├── 1.4.0 │ │ ├── 1.4.1 │ │ ├── 1.4.2 │ │ ├── 1.5.0 │ │ ├── 1.5.1 │ │ ├── 1.5.2 │ │ ├── 2.0.0 │ │ ├── 2.0.1 │ │ ├── 2.0.2 │ │ ├── 2.1.0 │ │ ├── 2.1.1 │ │ ├── 2.1.2 │ │ ├── 2.2.0 │ │ ├── 2.2.1 │ │ ├── 2.2.2 │ │ ├── 2.3.0 │ │ ├── 2.3.1 │ │ ├── 2.3.2 │ │ ├── 2.4.0 │ │ ├── 2.4.1 │ │ ├── 2.4.2 │ │ ├── 2.5.0 │ │ ├── 2.5.1 │ │ ├── 2.5.2 │ │ ├── 3.0.0 │ │ ├── 3.0.1 │ │ ├── 3.0.2 │ │ ├── 3.1.0 │ │ ├── 3.1.1 │ │ ├── 3.1.2 │ │ ├── 3.2.0 │ │ ├── 3.2.1 │ │ ├── 3.2.2 │ │ ├── 3.3.0 │ │ ├── 3.3.1 │ │ ├── 3.3.2 │ │ ├── 3.4.0 │ │ ├── 3.4.1 │ │ ├── 3.4.2 │ │ ├── 3.5.0 │ │ ├── 3.5.1 │ │ ├── 3.5.2 │ │ ├── 4.0.0 │ │ ├── 4.0.1 │ │ ├── 4.0.2 │ │ ├── 4.1.0 │ │ ├── 4.1.1 │ │ ├── 4.1.2 │ │ ├── 4.2.0 │ │ ├── 4.2.1 │ │ ├── 4.2.2 │ │ ├── 4.3.0 │ │ ├── 4.3.1 │ │ ├── 4.3.2 │ │ ├── 4.4.0 │ │ ├── 4.4.1 │ │ ├── 4.4.2 │ │ ├── 4.5.0 │ │ ├── 4.5.1 │ │ ├── 4.5.2 │ │ ├── 5.0.0 │ │ ├── 5.0.1 │ │ ├── 5.0.2 │ │ ├── 5.1.0 │ │ ├── 5.1.1 │ │ ├── 5.1.2 │ │ ├── 5.2.0 │ │ ├── 5.2.1 │ │ ├── 5.2.2 │ │ ├── 5.3.0 │ │ ├── 5.3.1 │ │ ├── 5.3.2 │ │ ├── 5.4.0 │ │ ├── 5.4.1 │ │ ├── 5.4.2 │ │ ├── 5.5.0 │ │ ├── 5.5.1 │ │ └── 5.5.2 │ └── zlib │ │ ├── .zarray │ │ ├── 0.0.0 │ │ ├── 0.0.1 │ │ ├── 0.0.2 │ │ ├── 0.1.0 │ │ ├── 0.1.1 │ │ ├── 0.1.2 │ │ ├── 0.2.0 │ │ ├── 0.2.1 │ │ ├── 0.2.2 │ │ ├── 0.3.0 │ │ ├── 0.3.1 │ │ ├── 0.3.2 │ │ ├── 0.4.0 │ │ ├── 0.4.1 │ │ ├── 0.4.2 │ │ ├── 0.5.0 │ │ ├── 0.5.1 │ │ ├── 0.5.2 │ │ ├── 1.0.0 │ │ ├── 1.0.1 │ │ ├── 1.0.2 │ │ ├── 1.1.0 │ │ ├── 1.1.1 │ │ ├── 1.1.2 │ │ ├── 1.2.0 │ │ ├── 1.2.1 │ │ ├── 1.2.2 │ │ ├── 1.3.0 │ │ ├── 1.3.1 │ │ ├── 1.3.2 │ │ ├── 1.4.0 │ │ ├── 1.4.1 │ │ ├── 1.4.2 │ │ ├── 1.5.0 │ │ ├── 1.5.1 │ │ ├── 1.5.2 │ │ ├── 2.0.0 │ │ ├── 2.0.1 │ │ ├── 2.0.2 │ │ ├── 2.1.0 │ │ ├── 2.1.1 │ │ ├── 2.1.2 │ │ ├── 2.2.0 │ │ ├── 2.2.1 │ │ ├── 2.2.2 │ │ ├── 2.3.0 │ │ ├── 2.3.1 │ │ ├── 2.3.2 │ │ ├── 2.4.0 │ │ ├── 2.4.1 │ │ ├── 2.4.2 │ │ ├── 2.5.0 │ │ ├── 2.5.1 │ │ ├── 2.5.2 │ │ ├── 3.0.0 │ │ ├── 3.0.1 │ │ ├── 3.0.2 │ │ ├── 3.1.0 │ │ ├── 3.1.1 │ │ ├── 3.1.2 │ │ ├── 3.2.0 │ │ ├── 3.2.1 │ │ ├── 3.2.2 │ │ ├── 3.3.0 │ │ ├── 3.3.1 │ │ ├── 3.3.2 │ │ ├── 3.4.0 │ │ ├── 3.4.1 │ │ ├── 3.4.2 │ │ ├── 3.5.0 │ │ ├── 3.5.1 │ │ ├── 3.5.2 │ │ ├── 4.0.0 │ │ ├── 4.0.1 │ │ ├── 4.0.2 │ │ ├── 4.1.0 │ │ ├── 4.1.1 │ │ ├── 4.1.2 │ │ ├── 4.2.0 │ │ ├── 4.2.1 │ │ ├── 4.2.2 │ │ ├── 4.3.0 │ │ ├── 4.3.1 │ │ ├── 4.3.2 │ │ ├── 4.4.0 │ │ ├── 4.4.1 │ │ ├── 4.4.2 │ │ ├── 4.5.0 │ │ ├── 4.5.1 │ │ ├── 4.5.2 │ │ ├── 5.0.0 │ │ ├── 5.0.1 │ │ ├── 5.0.2 │ │ ├── 5.1.0 │ │ ├── 5.1.1 │ │ ├── 5.1.2 │ │ ├── 5.2.0 │ │ ├── 5.2.1 │ │ ├── 5.2.2 │ │ ├── 5.3.0 │ │ ├── 5.3.1 │ │ ├── 5.3.2 │ │ ├── 5.4.0 │ │ ├── 5.4.1 │ │ ├── 5.4.2 │ │ ├── 5.5.0 │ │ ├── 5.5.1 │ │ └── 5.5.2 └── zarrita.zr3 │ ├── data │ └── root │ │ ├── blosc │ │ └── lz4 │ │ │ ├── c0 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── c1 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── c2 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── c3 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── c4 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── c5 │ │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── gzip │ │ ├── c0 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ ├── c1 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ ├── c2 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ ├── c3 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ ├── c4 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ └── c5 │ │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── raw │ │ ├── c0 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ ├── c1 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ ├── c2 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ ├── c3 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ ├── c4 │ │ │ ├── 0 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 1 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 2 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 3 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ ├── 4 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ │ └── 5 │ │ │ │ ├── 0 │ │ │ │ ├── 1 │ │ │ │ └── 2 │ │ └── c5 │ │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ └── zlib │ │ ├── c0 │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── c1 │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── c2 │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── c3 │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── c4 │ │ ├── 0 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 1 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 2 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 3 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ ├── 4 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ └── 5 │ │ │ ├── 0 │ │ │ ├── 1 │ │ │ └── 2 │ │ └── c5 │ │ ├── 0 │ │ ├── 0 │ │ ├── 1 │ │ └── 2 │ │ ├── 1 │ │ ├── 0 │ │ ├── 1 │ │ └── 2 │ │ ├── 2 │ │ ├── 0 │ │ ├── 1 │ │ └── 2 │ │ ├── 3 │ │ ├── 0 │ │ ├── 1 │ │ └── 2 │ │ ├── 4 │ │ ├── 0 │ │ ├── 1 │ │ └── 2 │ │ └── 5 │ │ ├── 0 │ │ ├── 1 │ │ └── 2 │ ├── meta │ └── root │ │ ├── blosc │ │ └── lz4.array.json │ │ ├── gzip.array.json │ │ ├── raw.array.json │ │ └── zlib.array.json │ └── zarr.json ├── generate_data ├── generate_pyn5.py ├── generate_reference_image.py ├── generate_z5py.py ├── generate_zarr.py ├── generate_zarrita.py ├── js │ ├── generate_data.sh │ ├── package-lock.json │ ├── package.json │ └── src │ │ ├── fsstore.js │ │ └── index.js ├── jzarr │ ├── generate_data.sh │ ├── pom.xml │ └── src │ │ └── main │ │ └── java │ │ └── zarr_implementations │ │ └── jzarr │ │ └── App.java ├── n5-java │ ├── generate_data.sh │ ├── pom.xml │ └── src │ │ └── main │ │ └── java │ │ └── zarr_implementations │ │ └── n5_java │ │ └── App.java └── xtensor_zarr │ ├── CMakeLists.txt │ ├── generate_data.sh │ ├── modules │ ├── FindBlosc.cmake │ └── FindOIIO.cmake │ └── src │ └── main.cpp └── test └── test_read_all.py /.gitignore: -------------------------------------------------------------------------------- 1 | target* 2 | __pycache__/ 3 | generate_data/xtensor_zarr/build 4 | node_modules/ 5 | report.* 6 | *.iml 7 | .idea 8 | 9 | # ignore data subdirectories 10 | data/**/ 11 | -------------------------------------------------------------------------------- /data/reference_image.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zarr-developers/zarr_implementations/185c4f93e114eb91dfea4e21be45a86eadca59f2/data/reference_image.png 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