├── 10 ├── 10.2 │ ├── P05859.fasta │ ├── Q9QPN3.fasta │ ├── P34058.fasta │ ├── Q76LV1.fasta │ ├── P01112.fasta │ ├── P16070-3.fasta │ ├── Q80YE2.fasta │ ├── Q5R651.fasta │ ├── Q9NZC7-5.fasta │ ├── Q9Y2A0-3.fasta │ ├── Q07812-4.fasta │ ├── Q62151-13.fasta │ ├── Q7LG56-6.fasta │ ├── P04885.fasta │ ├── Q7Z2E3-13.fasta │ ├── P03248.fasta │ ├── P10542.fasta │ ├── P14264.fasta │ ├── Q13616.fasta │ ├── Q13794-2.fasta │ ├── Q3U898.fasta │ ├── Q9JM54.fasta │ ├── A0A1J0IYW5.fasta │ ├── Q8WXC6-1.fasta │ ├── Q9Y2A0-4.fasta │ ├── Q9NQR1.fasta │ ├── P38398-3.fasta │ ├── P70388.fasta │ ├── Q7LG56-5.fasta │ ├── Q9H9B1-3.fasta │ ├── Q642A0.fasta │ ├── Q70UQ0-4.fasta │ ├── E1B7Q7.fasta │ ├── F1LP64.fasta │ ├── P70399.fasta │ ├── Q15843.fasta │ ├── Q20646.fasta │ ├── Q80YV3.fasta │ ├── Q8BGE4.fasta │ ├── Q8R2Q0.fasta │ ├── Q96PM5-6.fasta │ ├── Q9BRQ8.fasta │ ├── Q9UMX3.fasta │ ├── A0A150VKJ3.fasta │ ├── A6NF83.fasta │ ├── O12165.fasta │ ├── O15392-7.fasta │ ├── O70903.fasta │ ├── O94916.fasta │ ├── P48730.fasta │ ├── Q1A242.fasta │ ├── Q4PLJ0.fasta │ ├── Q62151-12.fasta │ ├── Q63046.fasta │ ├── Q77378.fasta │ ├── Q9HB71-3.fasta │ ├── E2RH47.fasta │ ├── O35425.fasta │ ├── O60356-2.fasta │ ├── P10545.fasta │ ├── P40505.fasta │ ├── P61085.fasta │ ├── P62951.fasta │ ├── P62952.fasta │ ├── P80492.fasta │ ├── Q13619.fasta │ ├── Q4AE70.fasta │ ├── Q4R504.fasta │ ├── Q5R465.fasta │ ├── Q5R692.fasta │ ├── Q62151-10.fasta │ ├── Q64364.fasta │ ├── Q6DG03.fasta │ ├── Q7YRC6.fasta │ ├── Q9DB85.fasta │ ├── Q9HCN2-3.fasta │ ├── P06702.fasta │ ├── P06703.fasta │ ├── P45481.fasta │ ├── P62992.fasta │ ├── Q6YNR6.fasta │ ├── Q8WYH8.fasta │ ├── Q99LM2.fasta │ ├── Q9HC62.fasta │ ├── Q9HCY8.fasta │ ├── Q9Y2A0-2.fasta │ ├── O91087.fasta │ ├── P03243-4.fasta │ ├── Q32PI1.fasta │ ├── Q497P3.fasta │ ├── Q9NXR8-3.fasta │ ├── Q9W678.fasta │ ├── B2RS91.fasta │ ├── O60443-3.fasta │ ├── O94916-4.fasta │ ├── O95425.fasta │ ├── P13084.fasta │ ├── P15941-15.fasta │ ├── P34947.fasta │ ├── P63165-2.fasta │ ├── P63166.fasta │ ├── Q08945.fasta │ ├── Q12962.fasta │ ├── Q13794.fasta │ ├── Q4R898.fasta │ ├── Q5E9J6.fasta │ ├── Q5I0H3.fasta │ ├── Q5R6J4.fasta │ ├── Q62881.fasta │ ├── Q6P1Q0-6.fasta │ ├── Q6P1Q0-7.fasta │ ├── Q9BXH1.fasta │ ├── Q9DBY1.fasta │ ├── Q9ERR2.fasta │ ├── Q9QXE4.fasta │ ├── Q9WV30-4.fasta │ ├── A2VE53.fasta │ ├── Q00987-8.fasta │ ├── Q4G1C9-4.fasta │ ├── Q9BGQ0.fasta │ ├── Q9D2Q8.fasta │ ├── Q9H4L4.fasta │ ├── Q9VTH4.fasta │ ├── A7MB47.fasta │ ├── O43159.fasta │ ├── Q0P585.fasta │ ├── Q0Z8U2.fasta │ ├── Q5U4F0.fasta │ ├── Q62151.fasta │ ├── Q9HCN2-4.fasta │ ├── Q9JJ72.fasta │ ├── O02703.fasta │ ├── P14174.fasta │ ├── P45983.fasta │ ├── P45984.fasta │ ├── P49185.fasta │ ├── P62839.fasta │ ├── Q07812-7.fasta │ ├── Q3MHP3.fasta │ ├── Q63495.fasta │ ├── Q63690.fasta │ ├── Q6NRS6.fasta │ ├── Q7Z2E3-7.fasta │ ├── Q99674-4.fasta │ ├── O14763-2.fasta │ ├── O15392-5.fasta │ ├── O15392-6.fasta │ ├── O43474-6.fasta │ ├── O74954.fasta │ ├── O75414-3.fasta │ ├── Q7Z6E9-4.fasta │ ├── Q8N114-5.fasta │ ├── Q9Y3C4.fasta │ ├── A0A1C4EE96.fasta │ ├── O08674.fasta │ ├── O75807.fasta │ ├── P35249.fasta │ ├── P79892.fasta │ ├── Q15109-6.fasta │ ├── Q98UD2.fasta │ ├── Q9Y5B9.fasta │ ├── A4L9P5.fasta │ ├── D4A7E1.fasta │ ├── F1QW76.fasta │ ├── F7EMX9.fasta │ ├── O02193.fasta │ ├── O35284.fasta │ ├── O88904.fasta │ ├── O95388-4.fasta │ ├── P09619.fasta │ ├── P43360.fasta │ ├── P50947.fasta │ ├── P62950.fasta │ ├── P62959.fasta │ ├── P62986.fasta │ ├── P62987.fasta │ ├── P68036-3.fasta │ ├── P70349.fasta │ ├── Q15572.fasta │ ├── Q3V016.fasta │ ├── Q4V793.fasta │ ├── Q5BJX1.fasta │ ├── Q5EAJ6.fasta │ ├── Q63934.fasta │ ├── Q6PF35.fasta │ ├── Q8N2F6.fasta │ ├── Q8N2W9.fasta │ ├── Q96E14.fasta │ ├── Q96EQ8.fasta │ ├── Q99732.fasta │ ├── Q99PV8.fasta │ ├── Q9BRA0-2.fasta │ ├── Q9BV47.fasta │ ├── Q9HCN2-2.fasta │ ├── Q9NYY3.fasta │ ├── Q9ULZ0-3.fasta │ ├── A0A1C2B7M1.fasta │ ├── A2T7F2.fasta │ ├── G5EDF7.fasta │ ├── O15151-3.fasta │ ├── O15151-4.fasta │ ├── P17679.fasta │ ├── P48963.fasta │ ├── Q42578.fasta │ ├── Q5RFA9.fasta │ ├── Q6P773.fasta │ ├── Q80ZG6.fasta │ ├── Q91ZX6.fasta │ ├── Q922Y0.fasta │ ├── Q9BY49.fasta │ ├── Q9EQ61.fasta │ ├── Q9ESK4.fasta │ ├── P29067.fasta │ ├── P63050.fasta │ ├── P97452.fasta │ ├── Q00987-7.fasta │ ├── Q5BN46-2.fasta │ ├── Q5PPL1.fasta │ ├── Q5XHH7.fasta │ ├── Q5XIH2.fasta │ ├── Q5ZKY2.fasta │ ├── Q7TPV4.fasta │ ├── Q7YRZ2.fasta │ ├── Q86WX3.fasta │ ├── Q8N726-2.fasta │ ├── Q8TDN4-4.fasta │ ├── Q99674-3.fasta │ ├── Q9D7I0-5.fasta │ ├── Q9D9R0.fasta │ ├── Q9H9A7.fasta │ ├── Q9ULZ0-2.fasta │ ├── A2RV80.fasta │ ├── O15392-4.fasta │ ├── O35473.fasta │ ├── O70526.fasta │ ├── O74412.fasta │ ├── O95996.fasta │ ├── O96017-11.fasta │ ├── P04492.fasta │ ├── P55215.fasta │ ├── P57059.fasta │ ├── Q15078.fasta │ ├── Q2KIE4.fasta │ ├── Q62151-8.fasta │ ├── Q62151-9.fasta │ ├── Q7LG56-4.fasta │ ├── Q8N114-4.fasta │ ├── Q8N2Z9-2.fasta │ ├── Q969K3.fasta │ ├── Q9ESJ1.fasta │ ├── Q9H4X1-2.fasta │ ├── A5PJC4.fasta │ ├── A5PJS6.fasta │ ├── D3ZDK2.fasta │ ├── O14933.fasta │ ├── O15205.fasta │ ├── O15392-2.fasta │ ├── P45974.fasta │ ├── P51668.fasta │ ├── P61077.fasta │ ├── P61078.fasta │ ├── P61079.fasta │ ├── P61086.fasta │ ├── P62750.fasta │ ├── P62837.fasta │ ├── P62838.fasta │ ├── Q06AA9.fasta │ ├── Q07812-5.fasta │ ├── Q4R5N4.fasta │ ├── Q6AYQ4.fasta │ ├── Q80TT8-4.fasta │ ├── Q96GD4-4.fasta │ ├── Q9JIX3.fasta │ ├── Q9NXR8.fasta │ ├── Q9XVK5.fasta │ ├── Q9Y3C4-3.fasta │ ├── A8QGZ7.fasta │ ├── O14684.fasta │ ├── O89106.fasta │ ├── P04486.fasta │ ├── P0CG49.fasta │ ├── P0CG50.fasta │ ├── P0CG62.fasta │ ├── P49789.fasta │ ├── P61077-2.fasta │ ├── P61077-3.fasta │ ├── P61086-3.fasta │ ├── P62837-2.fasta │ ├── P70289.fasta │ ├── Q05534.fasta │ ├── Q19360.fasta │ ├── Q6AZ61.fasta │ ├── Q96E14-2.fasta │ ├── Q9BX63.fasta │ ├── Q9QZU9.fasta │ ├── Q9R0B7.fasta │ ├── O13161.fasta │ ├── O14933-2.fasta │ ├── O54836.fasta │ ├── O75928.fasta │ ├── O95388-5.fasta │ ├── P03243-3.fasta │ ├── P10160.fasta │ ├── P15822.fasta │ ├── P15927.fasta │ ├── P21675.fasta │ ├── P24051.fasta │ ├── P25153.fasta │ ├── P62953.fasta │ ├── P63241-2.fasta │ ├── P63280.fasta │ ├── P63281.fasta │ ├── P68036-2.fasta │ ├── P97287.fasta │ ├── Q05086.fasta │ ├── Q16514.fasta │ ├── Q23457.fasta │ ├── Q28EG9.fasta │ ├── Q54NU5.fasta │ ├── Q5BKP2.fasta │ ├── Q5ZJN4.fasta │ ├── Q62151-7.fasta │ ├── Q641Y5.fasta │ ├── Q6P1Q0-4.fasta │ ├── Q6ZWY3.fasta │ ├── Q70UQ0.fasta │ ├── Q71UM5.fasta │ ├── Q7TSU0.fasta │ ├── Q7Z419.fasta │ ├── Q8NEA9.fasta │ ├── Q8TDI0.fasta │ ├── Q92466-4.fasta │ ├── Q96FX8.fasta │ ├── Q9R002.fasta │ ├── Q9XVN3.fasta │ ├── A0A158HYG7.fasta │ ├── B5DE69.fasta │ ├── P15941-13.fasta │ ├── P51532.fasta │ ├── P97377.fasta │ ├── Q01664.fasta │ ├── Q01851.fasta │ ├── Q09FC8.fasta │ ├── Q16514-2.fasta │ ├── Q1HVF7.fasta │ ├── Q6F3J0.fasta │ ├── Q86YD1.fasta │ ├── Q8N726.fasta │ ├── Q8R409.fasta │ ├── Q8TCV5.fasta │ ├── Q8WXC6.fasta │ ├── Q91WL8-3.fasta │ ├── Q99732-2.fasta │ ├── Q9BRA0.fasta │ ├── Q9H9Q2-3.fasta │ ├── Q9UF72.fasta │ ├── Q9WV95.fasta │ ├── O15151-5.fasta │ ├── O15392-3.fasta │ ├── O96017-4.fasta │ ├── O96017-7.fasta │ ├── P24522-2.fasta │ ├── P30044-3.fasta │ ├── P36624.fasta │ ├── P38936.fasta │ ├── P51480.fasta │ ├── P63208-2.fasta │ ├── Q03347-4.fasta │ ├── Q07812-6.fasta │ ├── Q5R5V0.fasta │ ├── Q7TQC5.fasta │ ├── Q8C0D7-5.fasta │ ├── Q8CHK4.fasta │ ├── Q8N2Z9-3.fasta │ ├── Q8NI60-3.fasta │ ├── Q96RU2.fasta │ ├── Q9JLH7.fasta │ ├── O43255.fasta │ ├── P02686-6.fasta │ ├── P15941-10.fasta │ ├── P15941-17.fasta │ ├── P30044-4.fasta │ ├── P43359.fasta │ ├── P51480-2.fasta │ ├── P51509.fasta │ ├── P53563-3.fasta │ ├── P54619.fasta │ ├── P78543.fasta │ ├── Q07817-3.fasta │ ├── Q14209.fasta │ ├── Q4G1C9-5.fasta │ ├── Q64364-2.fasta │ ├── Q64373-3.fasta │ ├── Q7Z2E3-3.fasta │ ├── Q8WXE1.fasta │ ├── Q96676.fasta │ ├── Q9H305-3.fasta │ ├── Q9ULC4-3.fasta │ ├── Q9Z1R2.fasta │ ├── A0A0A1E6W6.fasta │ ├── A2RV29.fasta │ ├── O43324-2.fasta │ ├── O54926-2.fasta │ ├── O60858-3.fasta │ ├── P01126.fasta │ ├── P04491.fasta │ ├── P10543.fasta │ ├── P10544.fasta │ ├── P10546.fasta │ ├── P23497.fasta │ ├── P40938.fasta │ ├── P54132.fasta │ ├── Q07812-8.fasta │ ├── Q14671.fasta │ ├── Q4G009.fasta │ ├── Q569K4-5.fasta │ ├── Q63184.fasta │ ├── Q7TNL3.fasta │ ├── Q8N2I9-3.fasta │ ├── Q99612.fasta │ ├── Q9DB27.fasta │ ├── Q9HB09-3.fasta │ ├── Q9ULZ3-3.fasta │ ├── Q9Y3C4-2.fasta │ ├── O09181.fasta │ ├── P0C1Z6.fasta │ ├── P0DOV2.fasta │ ├── P55965.fasta │ ├── P82798.fasta │ ├── Q5U2U6.fasta │ ├── Q8R143.fasta │ ├── Q8TE02-4.fasta │ ├── Q96FV9.fasta │ ├── Q96PM5-4.fasta │ ├── P56950.fasta │ ├── Q07820.fasta │ ├── Q13472.fasta │ ├── Q2HJ21.fasta │ ├── Q6PBE5.fasta │ ├── Q8IWI9.fasta │ ├── Q9BQJ4.fasta │ ├── Q9DB27-2.fasta │ ├── Q9H305.fasta │ ├── Q9HAV5.fasta │ ├── Q9JJG6-2.fasta │ ├── Q9JJG6.fasta │ ├── Q9ULC4-2.fasta │ ├── A6H7B5.fasta │ ├── O75414-2.fasta │ ├── P02686-5.fasta │ ├── P61290.fasta │ ├── P90971.fasta │ ├── Q3T1J1.fasta │ ├── Q9CZI9.fasta │ ├── Q9H160.fasta │ ├── Q9NRC8-3.fasta │ ├── Q9NWV8-3.fasta │ ├── Q9UFF9-3.fasta │ ├── A0A1C5JB18.fasta │ ├── B0BN44.fasta │ ├── O00268.fasta │ ├── O15547.fasta │ ├── O39929.fasta │ ├── O75340-2.fasta │ ├── O75340-3.fasta │ ├── O75832.fasta │ ├── O77618.fasta │ ├── P01112-2.fasta │ ├── P06493.fasta │ ├── P10275.fasta │ ├── P12004.fasta │ ├── P12815-2.fasta │ ├── P19525.fasta │ ├── P20749.fasta │ ├── P57724.fasta │ ├── Q01196-7.fasta │ ├── Q14934-23.fasta │ ├── Q14934-24.fasta │ ├── Q4QQM4.fasta │ ├── Q5R5X3.fasta │ ├── Q5ZM39.fasta │ ├── Q6ZW49.fasta │ ├── Q8NBR0.fasta │ ├── Q8R0L9.fasta │ ├── Q92841.fasta │ ├── Q96PG8.fasta │ ├── Q96PM5-5.fasta │ ├── Q99ML1.fasta │ ├── Q9C0K0.fasta │ ├── Q9HAF1-2.fasta │ ├── Q9HAF1-3.fasta │ ├── Q9HB65.fasta │ ├── Q9JJP6.fasta │ ├── Q9NZC7-4.fasta │ ├── Q9NZN8-4.fasta │ ├── Q9UGJ0.fasta │ ├── O09053.fasta │ ├── P22579.fasta │ ├── P97586.fasta │ ├── Q07812-2.fasta │ ├── Q16288.fasta │ ├── Q3UPP8.fasta │ ├── Q5RBU4.fasta │ ├── Q5RC72.fasta │ ├── Q80Z64.fasta │ ├── Q9BXH1-2.fasta │ ├── Q9R0Y5-2.fasta │ ├── Q9ULC4.fasta │ ├── Q9ULZ3-2.fasta │ ├── A0A1C3UT09.fasta │ ├── A0A1H1ZPA0.fasta │ ├── A2T767.fasta │ ├── D3ZJ96.fasta │ ├── O15164.fasta │ ├── O43189.fasta │ ├── P02686-3.fasta │ ├── P02686-4.fasta │ ├── P04603.fasta │ ├── P05854.fasta │ ├── P15941-14.fasta │ ├── P19546.fasta │ ├── P22814.fasta │ ├── P23921.fasta │ ├── P25911.fasta │ ├── P34152-9.fasta │ ├── P39689.fasta │ ├── P53801.fasta │ ├── P58340-3.fasta │ ├── P61086-2.fasta │ ├── P68399.fasta │ ├── P78560-2.fasta │ ├── P97613.fasta │ ├── Q4KM77.fasta │ ├── Q4R741.fasta │ ├── Q4V8F5.fasta │ ├── Q502I1.fasta │ ├── Q5R6I4.fasta │ ├── Q5VWG9.fasta │ ├── Q6P767.fasta │ ├── Q8CH18.fasta │ ├── Q9CQJ7-2.fasta │ ├── Q9CQJ7.fasta │ ├── Q9HAF1-4.fasta │ ├── Q9QSQ6.fasta │ ├── Q9U903.fasta │ ├── Q9Y4A5.fasta │ ├── A0A0I9PHJ4.fasta │ ├── O35147-2.fasta │ ├── O36006.fasta │ ├── O41804.fasta │ ├── O60356.fasta │ ├── O89293.fasta │ ├── O89945.fasta │ ├── O96017-6.fasta │ ├── P03406.fasta │ ├── P03407.fasta │ ├── P04602.fasta │ ├── P05857.fasta │ ├── P05858.fasta │ ├── P12479.fasta │ ├── P12480.fasta │ ├── P12481.fasta │ ├── P15941-11.fasta │ ├── P18801.fasta │ ├── P19545.fasta │ ├── P20867.fasta │ ├── P24741.fasta │ ├── P35959.fasta │ ├── P46736-5.fasta │ ├── P48734.fasta │ ├── P97305.fasta │ ├── P97313.fasta │ ├── Q00535.fasta │ ├── Q12968.fasta │ ├── Q17134.fasta │ ├── Q1A260.fasta │ ├── Q5R4V7.fasta │ ├── Q5RCH1.fasta │ ├── Q62433.fasta │ ├── Q6P1Q0-5.fasta │ ├── Q70627.fasta │ ├── Q75009.fasta │ ├── Q79671.fasta │ ├── Q89842.fasta │ ├── Q94527.fasta │ ├── Q9IDV1.fasta │ ├── Q9QBY1.fasta │ ├── Q9QBZ3.fasta │ ├── Q9WV70.fasta │ ├── D3ZEF4.fasta │ ├── E9Q5F9.fasta │ ├── O95388.fasta │ ├── P04601.fasta │ ├── P04637-9.fasta │ ├── P10407.fasta │ ├── P20886.fasta │ ├── P30405-2.fasta │ ├── P70618.fasta │ ├── P99029-2.fasta │ ├── Q15544-2.fasta │ ├── Q2EF73.fasta │ ├── Q4R4Q3.fasta │ ├── Q58D45-2.fasta │ ├── Q62151-6.fasta │ ├── Q64373-4.fasta │ ├── Q6P4Z9.fasta │ ├── Q6ZQ88.fasta │ └── Q86XK2-5.fasta └── 10.1_number_of_fastas.py ├── 11 ├── neuron_lengths.txt └── 11.5_use_method_to_exec_class.py ├── 12 ├── 1.txt └── 1.txt~ ├── 13 ├── test.csv ├── 工作簿1.xlsx ├── histgram.xls ├── smoking_and_lung_cancer.txt ├── boxplot.csv └── histgram.csv ├── 14 ├── 14.4_count_no._of_file ├── 14.4_files_no.py ├── first.py ├── second.pyc ├── hpv53l1db.nhr ├── hpv53l1db.nin ├── hpv53l1db.nsq ├── 14.2_pipline.py ├── pipeline.py ├── __pycache__ │ └── second.cpython-36.pyc └── 14.3_pipeline.py ├── 15 ├── 15.1_data_type.txt ├── 15.2_need_of_project.txt └── lysozyme .fasta ├── 16 ├── neuron.png ├── neuron_data.txt ├── boxplot.png ├── 16.5 │ ├── A8G0K4.png │ ├── B6INS1.png │ ├── C6XRM6.png │ ├── G7EVE2.png │ ├── H0K8L6.png │ ├── K9AD46.png │ ├── N8TX80.png │ ├── W6R5E1.png │ ├── X5KXE5.png │ ├── X6IJT5.png │ ├── X6JXX5.png │ ├── X7Z1G4.png │ ├── A0A009ICU8.png │ ├── A0A014CPE2.png │ ├── A0A0A8WN17.png │ ├── A0A0H1A0Q3.png │ ├── A0A0H5CRX2.png │ ├── A0A0M1KQC3.png │ ├── A0A0M1KV41.png │ ├── A0A0M2UD19.png │ ├── A0A0N1BE64.png │ ├── A0A0N1FYP0.png │ ├── A0A0Q0GDR7.png │ ├── A0A0Q5ZUU6.png │ ├── A0A0Q6JJ26.png │ ├── A0A100IDT2.png │ ├── A0A126ZWS8.png │ ├── A0A158LYE4.png │ ├── A0A172UNX2.png │ ├── A0A176UEC5.png │ ├── A0A1B1C4J2.png │ ├── A0A1B1WBD2.png │ ├── A0A1F0S1Y4.png │ └── A0A1G3DE92.png ├── plot_of_ATGU.png └── fasta_length_histgram.png ├── 18 ├── Thumbs.db ├── clock.png ├── domain.png ├── neuron.png ├── pUC19.png ├── boxplot.png ├── combined.png ├── pic │ ├── Thumbs.db │ ├── clock.png │ ├── pUC19.png │ ├── pUC19 - copy.png │ ├── small_clock.png │ ├── small_pUC19.png │ └── small_pUC19 - copy.png ├── pUC19 - copy.png ├── plot_of_ATGU.png └── fasta_length_histgram.png ├── 19 └── fasta_id.txt ├── 1.py ├── 14.zip ├── fasta_out_M.txt ├── krother-python-for-biologists-e47cf55735c7 ├── 03-modular_programming │ ├── 10-functions │ │ ├── 11.1_create_a_class.py │ │ ├── 10.5_order_secondary_structure_soluble.py │ │ └── nucleotideSubstitMatrix.txt │ └── 14-building_pipelines │ │ └── pathvariables.py ├── 02-data_management │ ├── 03-data_columns │ │ ├── counts.txt │ │ └── neuron_data.txt │ ├── 04-parsing_data │ │ ├── cancer_cell_proteins.txt │ │ └── cell_cycle_proteins.txt │ └── 06-filtering_data │ │ ├── list_old.txt │ │ ├── UniprotID.txt │ │ ├── text.txt │ │ └── list_new.txt └── pubmed.txt ├── README.doc ├── Moby_Dick.txt ├── RNA_similarity.txt ├── sorted_Lowry.txt ├── __pycache__ ├── neurons.cpython-36.pyc └── ion_channel_module.cpython-36.pyc ├── Lowry.txt └── .idea ├── vcs.xml └── misc.xml /1.py: -------------------------------------------------------------------------------- 1 | print('HelloWorld') 2 | -------------------------------------------------------------------------------- /14/14.4_count_no._of_file: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /10/10.2/P05859.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSS 2 | -------------------------------------------------------------------------------- /14/14.4_files_no.py: -------------------------------------------------------------------------------- 1 | #10.4_files_no.py -------------------------------------------------------------------------------- /10/10.2/Q9QPN3.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKRSVVGWPAVR 2 | -------------------------------------------------------------------------------- /13/test.csv: -------------------------------------------------------------------------------- 1 | 1.123,1.234,1.321,1.324,1.132 2 | -------------------------------------------------------------------------------- /19/fasta_id.txt: -------------------------------------------------------------------------------- 1 | KC470283.1 2 | KC470282.1 3 | -------------------------------------------------------------------------------- /10/10.2/P34058.fasta: -------------------------------------------------------------------------------- 1 | PEEVHHGEEEVETFAFQAEIAQLM 2 | -------------------------------------------------------------------------------- /10/10.2/Q76LV1.fasta: -------------------------------------------------------------------------------- 1 | LSAMLEDTENWLYEELSLTQDPVV 2 | -------------------------------------------------------------------------------- /10/10.2/P01112.fasta: -------------------------------------------------------------------------------- 1 | MPAGTAARAWVLVLALWGAVAGGQNITARI 2 | -------------------------------------------------------------------------------- /10/10.2/P16070-3.fasta: -------------------------------------------------------------------------------- 1 | MDKFWWHAAWGLCLVPLSLAQIGVGRRKS 2 | -------------------------------------------------------------------------------- /10/10.2/Q80YE2.fasta: -------------------------------------------------------------------------------- 1 | MMLGSLAPDPGSRRHSGQAALRPRRFNHQGL 2 | -------------------------------------------------------------------------------- /12/1.txt: -------------------------------------------------------------------------------- 1 | 1 2 | 2 3 | - 4 | 4 5 | 6 6 | 5 7 | 7 8 | 8 9 | -------------------------------------------------------------------------------- /10/10.2/Q5R651.fasta: -------------------------------------------------------------------------------- 1 | MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKTTK 2 | -------------------------------------------------------------------------------- /10/10.2/Q9NZC7-5.fasta: -------------------------------------------------------------------------------- 1 | MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYAK 2 | -------------------------------------------------------------------------------- /10/10.2/Q9Y2A0-3.fasta: -------------------------------------------------------------------------------- 1 | MMLGSLAPDPGSRRHSGQAALRPRRSGLPHAPPHSQ 2 | -------------------------------------------------------------------------------- /10/10.2/Q07812-4.fasta: -------------------------------------------------------------------------------- 1 | MDGSGEQPRGGVSSRIEQGEWGGRHPSWPWTRCLRMRPPRS 2 | -------------------------------------------------------------------------------- /10/10.2/Q62151-13.fasta: -------------------------------------------------------------------------------- 1 | MPAGTAARAWVLVLALWGAVAGGQNITARKARRMRRNVQS 2 | -------------------------------------------------------------------------------- /10/10.2/Q7LG56-6.fasta: -------------------------------------------------------------------------------- 1 | MGDPERPEAAGLDQDERSSSDTNESEIKSNEEPLLRKSSRRSF 2 | -------------------------------------------------------------------------------- /12/1.txt~: -------------------------------------------------------------------------------- 1 | 1 2 | 2 3 | - 4 | 4 5 | 6 6 | 5 7 | 7 8 | 8 9 | 10 | -------------------------------------------------------------------------------- /10/10.2/P04885.fasta: -------------------------------------------------------------------------------- 1 | MRTEMTPLVLSYQEADDILEHLVDNFFNEVFPIMSLNLIALWMAMSDPHPRN 2 | -------------------------------------------------------------------------------- /10/10.2/Q7Z2E3-13.fasta: -------------------------------------------------------------------------------- 1 | MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVESRV 2 | -------------------------------------------------------------------------------- /10/10.2/P03248.fasta: -------------------------------------------------------------------------------- 1 | MRHIICHGGVITEEMAASLLDQLIEEVLCLNLSLSPSQNRSLQDLPAVLKWRLLS 2 | -------------------------------------------------------------------------------- /10/10.2/P10542.fasta: -------------------------------------------------------------------------------- 1 | MRHIICHGGVITEEMAASLLDQLIEEVLCLNLSLSPSQNRSLQDLPGVLNWCLLS 2 | -------------------------------------------------------------------------------- /10/10.2/P14264.fasta: -------------------------------------------------------------------------------- 1 | MRHLRFLPQEIISSETGIEILEFVVLCLMMSHLLLIQLPHLLKFRRPHLQTYASPFL 2 | -------------------------------------------------------------------------------- /10/10.2/Q13616.fasta: -------------------------------------------------------------------------------- 1 | MKPAVDEMFPEGAGPYVDLDEAGGSTGLLMDLAANEKAVHADFFNDFEDLFDDDDVQ 2 | -------------------------------------------------------------------------------- /10/10.2/Q13794-2.fasta: -------------------------------------------------------------------------------- 1 | MPGKKARKNAQPSPARAPAELEVECATQLRRFGDKLNFRQKLLNLISKLFCSGT 2 | -------------------------------------------------------------------------------- /10/10.2/Q3U898.fasta: -------------------------------------------------------------------------------- 1 | MKPAVDEMFPEGAGPYVDLDEAGGSTGLLMDLAANEKAVHADFFNDFEDLFDDDDIQ 2 | -------------------------------------------------------------------------------- /10/10.2/Q9JM54.fasta: -------------------------------------------------------------------------------- 1 | MPGRKARKSAQPGPTRAPEELEVECAIQLRKFGDKLNFRQKLLNLLSKLFRSGT 2 | -------------------------------------------------------------------------------- /10/10.2/A0A1J0IYW5.fasta: -------------------------------------------------------------------------------- 1 | MLESREQLSVEEYETFFNRFDNQEFDFERELTQDPYSKVYLYSIEDHIRTYKIEK 2 | -------------------------------------------------------------------------------- /10/10.2/Q8WXC6-1.fasta: -------------------------------------------------------------------------------- 1 | MKPAVDEMFPEGAGPYVDLDEAGGSTGLLMDLAANEKAVHADFFNDFEDLFDDDDIQ 2 | -------------------------------------------------------------------------------- /10/10.2/Q9Y2A0-4.fasta: -------------------------------------------------------------------------------- 1 | MMLGSLAPDPGSRRHSGQAALRPRRYPTLWDRCRKRWLRPIFTQLLAAGLTTKDSESWQV 2 | -------------------------------------------------------------------------------- /10/10.2/Q9NQR1.fasta: -------------------------------------------------------------------------------- 1 | MRQPPGESDMAVSDALLPSFSTFASGPAGREKTLRQAGAPNNVRNLTTVTGTAVDGNSPA 2 | QMN 3 | -------------------------------------------------------------------------------- /10/10.2/P38398-3.fasta: -------------------------------------------------------------------------------- 1 | MDLSALRVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQ 2 | CPL 3 | -------------------------------------------------------------------------------- /10/10.2/P70388.fasta: -------------------------------------------------------------------------------- 1 | MPLLTQQIQDEDDQYSLVASLDNVRNLSTILKAIHFREHATCFATKNGIKVTVENAKCVQ 2 | ANAFIQGL 3 | -------------------------------------------------------------------------------- /10/10.2/Q7LG56-5.fasta: -------------------------------------------------------------------------------- 1 | MGDPERPEAAGLDQDEVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVF 2 | TLDADF 3 | -------------------------------------------------------------------------------- /10/10.2/Q9H9B1-3.fasta: -------------------------------------------------------------------------------- 1 | MAAADAERHLWLPMKAQQRNRQERPTWLRTVRPMGLVKTAMPAVMQMLQSTLRTAQGSTP 2 | RMAPTH 3 | -------------------------------------------------------------------------------- /14.zip: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/14.zip -------------------------------------------------------------------------------- /10/10.2/Q642A0.fasta: -------------------------------------------------------------------------------- 1 | MAAYSYRPGPGAGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPF 2 | NPVTVRSII 3 | -------------------------------------------------------------------------------- /10/10.2/Q70UQ0-4.fasta: -------------------------------------------------------------------------------- 1 | MSEVKSRKKSGPKGAPAAEPGKRSEGGKTPVARSSGGGGWADPRTCLSLLSLGTCLGLAC 2 | GRNLKLSWNN 3 | -------------------------------------------------------------------------------- /fasta_out_M.txt: -------------------------------------------------------------------------------- 1 | >sp|P04637|P53_HUMAN Cellular tumor antigen p53 OS=Homo sapiens GN=TP53 PE=1 SV=4 2 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/03-modular_programming/10-functions/11.1_create_a_class.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /10/10.2/E1B7Q7.fasta: -------------------------------------------------------------------------------- 1 | MNSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAIKEKEIPIE 2 | GLEFMGHGKEKPENSS 3 | -------------------------------------------------------------------------------- /10/10.2/F1LP64.fasta: -------------------------------------------------------------------------------- 1 | MNSVGEECTDMKRDYDQCFNRWFAEKFLKGAGSGDPCTELFRRYRECVQKAIKDKDIPVD 2 | GVDFMGPSKSKTESDGSS 3 | -------------------------------------------------------------------------------- /10/10.2/P70399.fasta: -------------------------------------------------------------------------------- 1 | MNSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAIKEKEIPIE 2 | GLEFMGHGKEKPENSS 3 | -------------------------------------------------------------------------------- /10/10.2/Q15843.fasta: -------------------------------------------------------------------------------- 1 | MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 2 | VLGGSVLHLVLALRGGF 3 | -------------------------------------------------------------------------------- /10/10.2/Q20646.fasta: -------------------------------------------------------------------------------- 1 | MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 2 | FAKDLEMFASICRKRQE 3 | -------------------------------------------------------------------------------- /10/10.2/Q80YV3.fasta: -------------------------------------------------------------------------------- 1 | MNSVGEECTDMKREYDQCFNRWFAEKFLKGDGSGDPCTELFRRYRECVQKAIKDKDIPVD 2 | GVDFMGPSKSKTEADGSS 3 | -------------------------------------------------------------------------------- /10/10.2/Q8BGE4.fasta: -------------------------------------------------------------------------------- 1 | MSDQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEE 2 | DVIEVYQEQTGGHSTV 3 | -------------------------------------------------------------------------------- /10/10.2/Q8R2Q0.fasta: -------------------------------------------------------------------------------- 1 | MNSVGEECTDMKREYDQCFNRWFAEKFLKGECSGDPCTELFRRYRDCVQKAIKDKDIPVD 2 | GVDFMGPSKSKTESDGSS 3 | -------------------------------------------------------------------------------- /10/10.2/Q96PM5-6.fasta: -------------------------------------------------------------------------------- 1 | MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV 2 | QCINCEKNSTCPTDL 3 | -------------------------------------------------------------------------------- /10/10.2/Q9BRQ8.fasta: -------------------------------------------------------------------------------- 1 | MASKGLQDLKQQVEGTAQEAVSAAGAAAQQVVDQATEAGQKAMDQLAKTTQETIDKTANQ 2 | ASDTFSGIGKKFGLLK 3 | -------------------------------------------------------------------------------- /10/10.2/Q9UMX3.fasta: -------------------------------------------------------------------------------- 1 | MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 2 | FKELEGWEPDDDPM 3 | -------------------------------------------------------------------------------- /README.doc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/README.doc -------------------------------------------------------------------------------- /10/10.2/A0A150VKJ3.fasta: -------------------------------------------------------------------------------- 1 | MCVTNVQVAVEGWNDAAYCKVINEGDLVIPDLLPLVFGLRALAILPANQRKKNQEEEFYL 2 | KVRGRECEEYTFSNR 3 | -------------------------------------------------------------------------------- /10/10.2/A6NF83.fasta: -------------------------------------------------------------------------------- 1 | MATLPPTANPSQQPLNLEDEDGILDEYDQYSLAHPCVVGGGRKGRTKREAAANTNRPSPG 2 | GHERKLLTKFQNSERKKAWR 3 | -------------------------------------------------------------------------------- /10/10.2/O12165.fasta: -------------------------------------------------------------------------------- 1 | MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYK 2 | ILGGSVLHLVLALRGGGGLGQ 3 | -------------------------------------------------------------------------------- /10/10.2/O15392-7.fasta: -------------------------------------------------------------------------------- 1 | MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 2 | FKELEGWEPDDDPMRELC 3 | -------------------------------------------------------------------------------- /10/10.2/O70903.fasta: -------------------------------------------------------------------------------- 1 | MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYK 2 | ILGGSVLHLVLALRGGGGLGQ 3 | -------------------------------------------------------------------------------- /10/10.2/O94916.fasta: -------------------------------------------------------------------------------- 1 | MDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTT 2 | VSEIIGRDLSGFPAPPGEEPPA 3 | -------------------------------------------------------------------------------- /10/10.2/P48730.fasta: -------------------------------------------------------------------------------- 1 | XIFPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG 2 | IEQSRRDDLESLGYVLMYFNL 3 | -------------------------------------------------------------------------------- /10/10.2/Q1A242.fasta: -------------------------------------------------------------------------------- 1 | MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYK 2 | ILGGSVLHLVLALRGGGGLRQ 3 | -------------------------------------------------------------------------------- /10/10.2/Q4PLJ0.fasta: -------------------------------------------------------------------------------- 1 | MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYK 2 | ILGGSVLHLVLALRGGGGLRQ 3 | -------------------------------------------------------------------------------- /10/10.2/Q62151-12.fasta: -------------------------------------------------------------------------------- 1 | MPAGTAARAWVLVLALWGETLPAPTLPLSSPAPTPPPVPPCPLEIPLNLGTTFQRPSPTL 2 | SYTRTPQPHLSPSTLPQ 3 | -------------------------------------------------------------------------------- /10/10.2/Q63046.fasta: -------------------------------------------------------------------------------- 1 | ALDDVQDGTLVTIKAGNDENVMAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITI 2 | STFPSQVATYSKAIKVTVD 3 | -------------------------------------------------------------------------------- /10/10.2/Q77378.fasta: -------------------------------------------------------------------------------- 1 | MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYK 2 | ILGGSVLHLVLALRGGGGLRQ 3 | -------------------------------------------------------------------------------- /10/10.2/Q9HB71-3.fasta: -------------------------------------------------------------------------------- 1 | MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKP 2 | AAVVAPITTGYTDGISQISL 3 | -------------------------------------------------------------------------------- /13/工作簿1.xlsx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/13/工作簿1.xlsx -------------------------------------------------------------------------------- /14/first.py: -------------------------------------------------------------------------------- 1 | <<<<<<< HEAD 2 | 260.00 3 | ======= 4 | 1 5 | >>>>>>> 1826422aa18a04af5ee2b90666e6b78299f01da3 6 | -------------------------------------------------------------------------------- /14/second.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/14/second.pyc -------------------------------------------------------------------------------- /15/15.1_data_type.txt: -------------------------------------------------------------------------------- 1 | seq = '' 2 | 3 | directory : module 4 | 5 | filename = [] 6 | 7 | sequences = {} 8 | -------------------------------------------------------------------------------- /16/neuron.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/neuron.png -------------------------------------------------------------------------------- /16/neuron_data.txt: -------------------------------------------------------------------------------- 1 | 16.38 2 | 139.90 3 | 441.46 4 | 29.03 5 | 40.93 6 | 202.07 7 | 142.30 8 | 346.00 9 | 300.00 -------------------------------------------------------------------------------- /18/Thumbs.db: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/Thumbs.db -------------------------------------------------------------------------------- /18/clock.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/clock.png -------------------------------------------------------------------------------- /18/domain.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/domain.png -------------------------------------------------------------------------------- /18/neuron.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/neuron.png -------------------------------------------------------------------------------- /18/pUC19.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/pUC19.png -------------------------------------------------------------------------------- /Moby_Dick.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/Moby_Dick.txt -------------------------------------------------------------------------------- /10/10.2/E2RH47.fasta: -------------------------------------------------------------------------------- 1 | MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 2 | TVLCQPTGGKARLTEGCSFRRKQH 3 | -------------------------------------------------------------------------------- /10/10.2/O35425.fasta: -------------------------------------------------------------------------------- 1 | MYCLQWLLPVLLIPKPLNPALWFSHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYS 2 | CWGNCFLYHCSDSPLPESAHDPGVVGT 3 | -------------------------------------------------------------------------------- /10/10.2/O60356-2.fasta: -------------------------------------------------------------------------------- 1 | MATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPG 2 | GHERKLVTKLQNSERKKRGARR 3 | -------------------------------------------------------------------------------- /10/10.2/P10545.fasta: -------------------------------------------------------------------------------- 1 | MERRNPSERGVPAGFSGHASVESGCETQESPATVVFRPPGDNTDGGAAAAAGGSQAAAAG 2 | AEPMEPESRPGPSGMNVVQQPPPP 3 | -------------------------------------------------------------------------------- /10/10.2/P40505.fasta: -------------------------------------------------------------------------------- 1 | MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 2 | TVLCQPTGGKARLTEGCSFRRKQH 3 | -------------------------------------------------------------------------------- /10/10.2/P61085.fasta: -------------------------------------------------------------------------------- 1 | MIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLA 2 | DLLTQNPELFRKNAEEFTLRFGVDRPS 3 | -------------------------------------------------------------------------------- /10/10.2/P62951.fasta: -------------------------------------------------------------------------------- 1 | MYCLQWLLPVLLIPKPLNPALWFSHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYS 2 | CWGNCFLYHCSDSPLPESAHDPGVVGT 3 | -------------------------------------------------------------------------------- /10/10.2/P62952.fasta: -------------------------------------------------------------------------------- 1 | MYCLQWLLPVLLIPKPLNPALWFSHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYS 2 | CWGNCFLYHCSDSPLPESAHDPGVVGT 3 | -------------------------------------------------------------------------------- /10/10.2/P80492.fasta: -------------------------------------------------------------------------------- 1 | MYCLQWLLPVLLIPKPLNPALWFSHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYS 2 | CWGNCFLYHCSDSPLPESAHDPGVVGT 3 | -------------------------------------------------------------------------------- /10/10.2/Q13619.fasta: -------------------------------------------------------------------------------- 1 | MEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDK 2 | EAAEAIEAEGATAPLTELLHSRNEGVGK 3 | -------------------------------------------------------------------------------- /10/10.2/Q4AE70.fasta: -------------------------------------------------------------------------------- 1 | MYCLQWLLPVLLIPKPLNPALWFSHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYS 2 | CWGNCFLYHCSDSPLPESAHDPGVVGT 3 | -------------------------------------------------------------------------------- /10/10.2/Q4R504.fasta: -------------------------------------------------------------------------------- 1 | MYCLQWLLPVLLIPKPLNPALWFSHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYS 2 | CWGNCFLYHCTGSHLPESAHDPRIVGT 3 | -------------------------------------------------------------------------------- /10/10.2/Q5R465.fasta: -------------------------------------------------------------------------------- 1 | MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 2 | TVLCQPTGGKARLTEGCSFRRKQH 3 | -------------------------------------------------------------------------------- /10/10.2/Q5R692.fasta: -------------------------------------------------------------------------------- 1 | MYCLQWLLPVLLIPKPLNPALWFSHSMFMGFYLLNFLLERKPCTICALVFLAALFLICYS 2 | CWGNCFLYHCSDSPLPESAHDPGVVGT 3 | -------------------------------------------------------------------------------- /10/10.2/Q62151-10.fasta: -------------------------------------------------------------------------------- 1 | MPAGTAARAWVLVLALWGAVAGGQNIPALCCSSLRWGTRMRAPIAAWPPTLATDLRKALL 2 | SASGSQKPAMRGQLKALWVSLGWVR 3 | -------------------------------------------------------------------------------- /10/10.2/Q64364.fasta: -------------------------------------------------------------------------------- 1 | MLLRSQRLGQQPLPRRPGHDDGQRPSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGH 2 | AGGAAPGRGAAGRARCLGPSARGPG 3 | -------------------------------------------------------------------------------- /10/10.2/Q6DG03.fasta: -------------------------------------------------------------------------------- 1 | MSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDH 2 | RGIIPNRGFLRQLLALDRRLRQGLEA 3 | -------------------------------------------------------------------------------- /10/10.2/Q7YRC6.fasta: -------------------------------------------------------------------------------- 1 | MYCLQWLLPVLLIPKPLNPALWFSHSMFMGFYLLSFLLERKPCTICALVFLAALFLICYS 2 | CWGNCFLYHCSDSPLPESAHDPGVVGT 3 | -------------------------------------------------------------------------------- /10/10.2/Q9DB85.fasta: -------------------------------------------------------------------------------- 1 | MKQTQVGSLFSLGIRNPEPGPVSGTAVPRQLAWKSGKYVMVMGVVQACSPEPCLQAVKMT 2 | DLSDNPIHESMWELEVEDLHRNIP 3 | -------------------------------------------------------------------------------- /10/10.2/Q9HCN2-3.fasta: -------------------------------------------------------------------------------- 1 | MGSSSEASFRSAQASCSGARRQGLGRGDQNLSVMPPNGRAQTHTPGWVSDPLVLGAQVHG 2 | GCRGIEALSVSSGSWSSATVWILTVQ 3 | -------------------------------------------------------------------------------- /11/neuron_lengths.txt: -------------------------------------------------------------------------------- 1 | 16.38 2 | 139.90 3 | 441.46 4 | 29.03 5 | 40.93 6 | 202.07 7 | 142.30 8 | 346.00 9 | 300.00 -------------------------------------------------------------------------------- /13/histgram.xls: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/13/histgram.xls -------------------------------------------------------------------------------- /14/hpv53l1db.nhr: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/14/hpv53l1db.nhr -------------------------------------------------------------------------------- /14/hpv53l1db.nin: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/14/hpv53l1db.nin -------------------------------------------------------------------------------- /14/hpv53l1db.nsq: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/14/hpv53l1db.nsq -------------------------------------------------------------------------------- /16/boxplot.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/boxplot.png -------------------------------------------------------------------------------- /18/boxplot.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/boxplot.png -------------------------------------------------------------------------------- /18/combined.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/combined.png -------------------------------------------------------------------------------- /18/pic/Thumbs.db: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/pic/Thumbs.db -------------------------------------------------------------------------------- /18/pic/clock.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/pic/clock.png -------------------------------------------------------------------------------- /18/pic/pUC19.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/pic/pUC19.png -------------------------------------------------------------------------------- /RNA_similarity.txt: -------------------------------------------------------------------------------- 1 | A G C U 2 | A 1.0 0.5 0.0 0.0 3 | G 0.5 1.0 0.0 0.0 4 | C 0.0 0.0 1.0 0.5 5 | G 0.0 0.0 0.5 1.0 -------------------------------------------------------------------------------- /10/10.2/P06702.fasta: -------------------------------------------------------------------------------- 1 | MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 2 | LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 3 | -------------------------------------------------------------------------------- /10/10.2/P06703.fasta: -------------------------------------------------------------------------------- 1 | MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 2 | LDEDGDGECDFQEFMAFVSMVTTACHEFFEHE 3 | -------------------------------------------------------------------------------- /10/10.2/P45481.fasta: -------------------------------------------------------------------------------- 1 | MAADRGRRILGVCGMHPHHQETLKKNRVVLAKQLLLSELLEHLLEKDIITLEMRELIQAK 2 | VGSFSQNVELLNLLPKRGPQAFDAFCEALHS 3 | -------------------------------------------------------------------------------- /10/10.2/P62992.fasta: -------------------------------------------------------------------------------- 1 | MACPLDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDL 2 | DRNKDQEVNFQEYVTFLGALALIYNEALKG 3 | -------------------------------------------------------------------------------- /10/10.2/Q6YNR6.fasta: -------------------------------------------------------------------------------- 1 | MSELEKAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 2 | LDSDGDGECDFQEFMAFVAMITTACHEFFEHE 3 | -------------------------------------------------------------------------------- /10/10.2/Q8WYH8.fasta: -------------------------------------------------------------------------------- 1 | MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE 2 | QMASIKKDYYKALEDADEKVQLANQIYDLDLWN 3 | -------------------------------------------------------------------------------- /10/10.2/Q99LM2.fasta: -------------------------------------------------------------------------------- 1 | MAEECPRACAEPVAPKATAPPERTSDYYRVSADLPGRFNNPGWFRGYRTQKAVSVYRTSN 2 | QAYGSRAPTVHEMPRVECSGTILSMFTWRKAS 3 | -------------------------------------------------------------------------------- /10/10.2/Q9HC62.fasta: -------------------------------------------------------------------------------- 1 | MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 2 | LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 3 | -------------------------------------------------------------------------------- /10/10.2/Q9HCY8.fasta: -------------------------------------------------------------------------------- 1 | MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 2 | LDEDGDGECDFQEFMAFVAMVTTACHEFFEHE 3 | -------------------------------------------------------------------------------- /10/10.2/Q9Y2A0-2.fasta: -------------------------------------------------------------------------------- 1 | MMLGSLAPDPGSRRHSGQAALRPRRYPTLWDRCRKRWLRPIFTQLLAAGLAYHTLLPIPS 2 | EPLFAAPGEHLHQCFVKESYCPPRVLAKEQ 3 | -------------------------------------------------------------------------------- /16/16.5/A8G0K4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A8G0K4.png -------------------------------------------------------------------------------- /16/16.5/B6INS1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/B6INS1.png -------------------------------------------------------------------------------- /16/16.5/C6XRM6.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/C6XRM6.png -------------------------------------------------------------------------------- /16/16.5/G7EVE2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/G7EVE2.png -------------------------------------------------------------------------------- /16/16.5/H0K8L6.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/H0K8L6.png -------------------------------------------------------------------------------- /16/16.5/K9AD46.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/K9AD46.png -------------------------------------------------------------------------------- /16/16.5/N8TX80.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/N8TX80.png -------------------------------------------------------------------------------- /16/16.5/W6R5E1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/W6R5E1.png -------------------------------------------------------------------------------- /16/16.5/X5KXE5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/X5KXE5.png -------------------------------------------------------------------------------- /16/16.5/X6IJT5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/X6IJT5.png -------------------------------------------------------------------------------- /16/16.5/X6JXX5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/X6JXX5.png -------------------------------------------------------------------------------- /16/16.5/X7Z1G4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/X7Z1G4.png -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/02-data_management/03-data_columns/counts.txt: -------------------------------------------------------------------------------- 1 | number of neuron lengths: 7 2 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/03-modular_programming/10-functions/10.5_order_secondary_structure_soluble.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /sorted_Lowry.txt: -------------------------------------------------------------------------------- 1 | protein ext1 ext2 ext3 2 | 0.16 0.038 0.044 0.04 3 | 0.16 0.038 0.044 0.04 4 | 0.33 0.089 0.095 0.091 5 | -------------------------------------------------------------------------------- /10/10.2/O91087.fasta: -------------------------------------------------------------------------------- 1 | MGGRWSKSSIVGWPAIRERIRRTDPAADGVGAVSRDLEKHGAITSSNTRGTNADCAWLEA 2 | QEESEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGG 3 | -------------------------------------------------------------------------------- /10/10.2/P03243-4.fasta: -------------------------------------------------------------------------------- 1 | MERRNPSERGVPAGFSGHASVESGCETQESPATVVFRPPGDNTDGGAAAAAGGSQAAAAG 2 | AEPMEPESRPGPSGMNVVQEGGVPTLPMQFESHD 3 | -------------------------------------------------------------------------------- /10/10.2/Q32PI1.fasta: -------------------------------------------------------------------------------- 1 | MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAI 2 | IRILQQLLFIHFRIGCRHSRIGVTQQRRARNGASRS 3 | -------------------------------------------------------------------------------- /10/10.2/Q497P3.fasta: -------------------------------------------------------------------------------- 1 | MEPAAPTVQPRAQPPPPDVWPPVGSEEEFYDCPDYYYLRDFPACGAGRINGRTRRERELR 2 | TNWLVPGGHERKIAQKLLNSQRKRRQRQLQPRPRTRLT 3 | -------------------------------------------------------------------------------- /10/10.2/Q9NXR8-3.fasta: -------------------------------------------------------------------------------- 1 | MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE 2 | QMASIKKDYYKALEDADEKVQLANQIYDLQHF 3 | -------------------------------------------------------------------------------- /10/10.2/Q9W678.fasta: -------------------------------------------------------------------------------- 1 | MEAPAERALPRLQALARPPPPISYEEELYDCLDYYYLRDFPACGAGRSKGRTRREQALRT 2 | NWPAPGGHERKVAQKLLNGQRKRRQRQLHPKMRTRLT 3 | -------------------------------------------------------------------------------- /16/plot_of_ATGU.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/plot_of_ATGU.png -------------------------------------------------------------------------------- /18/pUC19 - copy.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/pUC19 - copy.png -------------------------------------------------------------------------------- /18/plot_of_ATGU.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/plot_of_ATGU.png -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/02-data_management/04-parsing_data/cancer_cell_proteins.txt: -------------------------------------------------------------------------------- 1 | P43686 2 | P62333 3 | -------------------------------------------------------------------------------- /10/10.2/B2RS91.fasta: -------------------------------------------------------------------------------- 1 | MNSTFNQTDSGIFSNRTEENLLCCNFSSVVTDNGFAAAAPDERSLFIMRIVQIAVMCVLS 2 | LTVVFGIFFLGCNLLIKSEGMINFLVTDRRPSKEVEAVIVGAY 3 | -------------------------------------------------------------------------------- /10/10.2/O60443-3.fasta: -------------------------------------------------------------------------------- 1 | MPDSAAALLGTCCKLQIIPTLCHLLRALSDDGVSDLEDPTLTPLKDTERFGIVQRLFASA 2 | DISLERLKSSVKAVILKDSKVFPLLLCITLNGLCALGREHS 3 | -------------------------------------------------------------------------------- /10/10.2/O94916-4.fasta: -------------------------------------------------------------------------------- 1 | MPSDFISLLSADLDLESPKSLYSRDSLKLHPSQNFHRAGLLEESVYDLLPKELQLPPSRE 2 | TSVASMSQTSGGEAGSPPPAVVAAGFASEAGSVCIKNDL 3 | -------------------------------------------------------------------------------- /10/10.2/O95425.fasta: -------------------------------------------------------------------------------- 1 | MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 2 | SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV 3 | -------------------------------------------------------------------------------- /10/10.2/P13084.fasta: -------------------------------------------------------------------------------- 1 | MATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGPLIMPMPTSPLTPALVTGGGGR 2 | KGRTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 3 | -------------------------------------------------------------------------------- /10/10.2/P15941-15.fasta: -------------------------------------------------------------------------------- 1 | MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAIPAPTTT 2 | KSCRETFLKCFCRFINKGVFWASPILSSGQDLWWYN 3 | -------------------------------------------------------------------------------- /10/10.2/P34947.fasta: -------------------------------------------------------------------------------- 1 | MPTDYIRNGVLYVTENYLCFESSKSGSSKRNKVIKLVDITDIQKYKVLSVLPGSGMGIAV 2 | STPSTQKPLVFGAMVHRDEAFETILSQYIKITSAAASGGDS 3 | -------------------------------------------------------------------------------- /10/10.2/P63165-2.fasta: -------------------------------------------------------------------------------- 1 | MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 2 | SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV 3 | -------------------------------------------------------------------------------- /10/10.2/P63166.fasta: -------------------------------------------------------------------------------- 1 | MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 2 | SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSNV 3 | -------------------------------------------------------------------------------- /10/10.2/Q08945.fasta: -------------------------------------------------------------------------------- 1 | MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 2 | SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV 3 | -------------------------------------------------------------------------------- /10/10.2/Q12962.fasta: -------------------------------------------------------------------------------- 1 | MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 2 | SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV 3 | -------------------------------------------------------------------------------- /10/10.2/Q13794.fasta: -------------------------------------------------------------------------------- 1 | MPGRKARRNAPVNPTRAELPPEFAAQLRKIGDKVYCTWSAPDITVVLAQMPGKSQKSRMR 2 | SPSPTRVPADLKDECAQLRRIGDKVNLRQKLLNLISKLFNLVT 3 | -------------------------------------------------------------------------------- /10/10.2/Q4R898.fasta: -------------------------------------------------------------------------------- 1 | MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 2 | LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGCWP 3 | -------------------------------------------------------------------------------- /10/10.2/Q5E9J6.fasta: -------------------------------------------------------------------------------- 1 | MNSTGFNDTDSALFSNTSFLSCCNVSSVVTDSGFVSAALDERSVFIMRTVQIAVMCVLAL 2 | TVVFGIFFLGCNLLIKSEGMINFLVTDRRPSKDVEAVIVGSY 3 | -------------------------------------------------------------------------------- /10/10.2/Q5I0H3.fasta: -------------------------------------------------------------------------------- 1 | MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 2 | SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV 3 | -------------------------------------------------------------------------------- /10/10.2/Q5R6J4.fasta: -------------------------------------------------------------------------------- 1 | MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 2 | SLRFLFEGQRIADNHTPKELGMEEEDVIEVYHEQTGGHSTV 3 | -------------------------------------------------------------------------------- /10/10.2/Q62881.fasta: -------------------------------------------------------------------------------- 1 | MDPPTRPSVSGPRTRARPPPPEALPTVGFEEEVYDCLDYYYLRDFPASGAGRSKGRTRRE 2 | QQLRTNYPVPGGHERKVAQILLNGQRKRRQRQLQPRPRTRLA 3 | -------------------------------------------------------------------------------- /10/10.2/Q6P1Q0-6.fasta: -------------------------------------------------------------------------------- 1 | MLLTSYLPPPLLRHRLKTHTTVIHQLDKALAKLGIGQLTAQEVKSACYLRGLNSTHIGED 2 | RCRTWLGEWLQISCSLKEAELSLLLHNVVLLSTNYLGTRR 3 | -------------------------------------------------------------------------------- /10/10.2/Q6P1Q0-7.fasta: -------------------------------------------------------------------------------- 1 | MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRSSKLHLSPKADVKNLMSYV 2 | VTKTKAINGKYHRFLGRHFPRFYVLYTIFMKGTCFPGNY 3 | -------------------------------------------------------------------------------- /10/10.2/Q9BXH1.fasta: -------------------------------------------------------------------------------- 1 | MKFGMGSAQACPCQVPRAASTTWVPCQICETRGAAAAPPLTLEGPVQSHHGTPALTQGPQ 2 | SPRDGAQLGACTRPVDVRDSGGRPLPPPDTLASAGDFLCTM 3 | -------------------------------------------------------------------------------- /10/10.2/Q9DBY1.fasta: -------------------------------------------------------------------------------- 1 | MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMN 2 | SLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV 3 | -------------------------------------------------------------------------------- /10/10.2/Q9ERR2.fasta: -------------------------------------------------------------------------------- 1 | MLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQMIK 2 | RNQLLPAVKAHSDVRKKTVFQPVHPIQPIQMPAFTTVQRK 3 | -------------------------------------------------------------------------------- /10/10.2/Q9QXE4.fasta: -------------------------------------------------------------------------------- 1 | MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 2 | CFQISPAEETLELGRLVSPGCHKSSAPQERRLDPRARCVVHI 3 | -------------------------------------------------------------------------------- /10/10.2/Q9WV30-4.fasta: -------------------------------------------------------------------------------- 1 | MPSDFISLLSADLDLESPKSLYSRDSLKLHPSQTFHRAGLLEESVYDLLPKELQLPPPRE 2 | TSVASMSQTSGGEAGSPPPAVVAAGFASEAGSVCIKNDL 3 | -------------------------------------------------------------------------------- /16/16.5/A0A009ICU8.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A009ICU8.png -------------------------------------------------------------------------------- /16/16.5/A0A014CPE2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A014CPE2.png -------------------------------------------------------------------------------- /16/16.5/A0A0A8WN17.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0A8WN17.png -------------------------------------------------------------------------------- /16/16.5/A0A0H1A0Q3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0H1A0Q3.png -------------------------------------------------------------------------------- /16/16.5/A0A0H5CRX2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0H5CRX2.png -------------------------------------------------------------------------------- /16/16.5/A0A0M1KQC3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0M1KQC3.png -------------------------------------------------------------------------------- /16/16.5/A0A0M1KV41.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0M1KV41.png -------------------------------------------------------------------------------- /16/16.5/A0A0M2UD19.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0M2UD19.png -------------------------------------------------------------------------------- /16/16.5/A0A0N1BE64.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0N1BE64.png -------------------------------------------------------------------------------- /16/16.5/A0A0N1FYP0.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0N1FYP0.png -------------------------------------------------------------------------------- /16/16.5/A0A0Q0GDR7.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0Q0GDR7.png -------------------------------------------------------------------------------- /16/16.5/A0A0Q5ZUU6.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0Q5ZUU6.png -------------------------------------------------------------------------------- /16/16.5/A0A0Q6JJ26.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A0Q6JJ26.png -------------------------------------------------------------------------------- /16/16.5/A0A100IDT2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A100IDT2.png -------------------------------------------------------------------------------- /16/16.5/A0A126ZWS8.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A126ZWS8.png -------------------------------------------------------------------------------- /16/16.5/A0A158LYE4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A158LYE4.png -------------------------------------------------------------------------------- /16/16.5/A0A172UNX2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A172UNX2.png -------------------------------------------------------------------------------- /16/16.5/A0A176UEC5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A176UEC5.png -------------------------------------------------------------------------------- /16/16.5/A0A1B1C4J2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A1B1C4J2.png -------------------------------------------------------------------------------- /16/16.5/A0A1B1WBD2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A1B1WBD2.png -------------------------------------------------------------------------------- /16/16.5/A0A1F0S1Y4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A1F0S1Y4.png -------------------------------------------------------------------------------- /16/16.5/A0A1G3DE92.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/16.5/A0A1G3DE92.png -------------------------------------------------------------------------------- /18/pic/pUC19 - copy.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/pic/pUC19 - copy.png -------------------------------------------------------------------------------- /18/pic/small_clock.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/pic/small_clock.png -------------------------------------------------------------------------------- /18/pic/small_pUC19.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/pic/small_pUC19.png -------------------------------------------------------------------------------- /10/10.2/A2VE53.fasta: -------------------------------------------------------------------------------- 1 | MPKEQQEVVVLGSPHISTSATATTINMPEISTPDHVVWSLFNTLFMNFCCLGFVAYAYSV 2 | KSRDRKMVGDTTGAQAFASTAKCLNISSLFFTILTAIVVIVVCAIR 3 | -------------------------------------------------------------------------------- /10/10.2/Q00987-8.fasta: -------------------------------------------------------------------------------- 1 | MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY 2 | IMTKRLYDEKQQHIVNDCANLFPLVDLSIRELYISNYITLGI 3 | -------------------------------------------------------------------------------- /10/10.2/Q4G1C9-4.fasta: -------------------------------------------------------------------------------- 1 | MEAARPFAREWRAQSLPLAVGGVLKLRLCELWLLLLGSSLNARFLPDEEDVDFINEYVNL 2 | HNELRGDVIPRGSNLRFMLWYCCDSDGSRFIIGFPNLSPRTPSAPL 3 | -------------------------------------------------------------------------------- /10/10.2/Q9BGQ0.fasta: -------------------------------------------------------------------------------- 1 | MPGRKARRNAPLNPTRAELPPEFAAQLRKIGDKVYCTWSAPDITAVLAQMPGKKSRKSTM 2 | RRSPSPTRVPADLKDECDQLRRIGDKVNLRQKLLNFISKLFNLIT 3 | -------------------------------------------------------------------------------- /10/10.2/Q9D2Q8.fasta: -------------------------------------------------------------------------------- 1 | MGQCRSANAEDAQELSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPS 2 | NCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVKLENAVQGS 3 | -------------------------------------------------------------------------------- /10/10.2/Q9H4L4.fasta: -------------------------------------------------------------------------------- 1 | MGQCRSANAEDAQEFSDVERAIETLIKNFHKYSVAGKKETLTPAELRDLVTQQLPHLMPS 2 | NCGLEEKIANLGNCNDSKLEFGSFWELIGEAAKSVKMERPVTRS 3 | -------------------------------------------------------------------------------- /10/10.2/Q9VTH4.fasta: -------------------------------------------------------------------------------- 1 | MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPS 2 | NCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH 3 | -------------------------------------------------------------------------------- /14/14.2_pipline.py: -------------------------------------------------------------------------------- 1 | #10.2_pipline.py 2 | import os 3 | from first import * 4 | from second import * 5 | os.system(cmd1) 6 | os.system(cdm2) -------------------------------------------------------------------------------- /14/pipeline.py: -------------------------------------------------------------------------------- 1 | import os 2 | import time 3 | os.system("python " + 'first.py') 4 | time.sleep(10) 5 | os.system('python ' + 'second.py') -------------------------------------------------------------------------------- /10/10.2/A7MB47.fasta: -------------------------------------------------------------------------------- 1 | MAQASDSTAMEVEEATNQTVKKRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQA 2 | NQAAGLKDECTVAWGNCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 3 | -------------------------------------------------------------------------------- /10/10.2/O43159.fasta: -------------------------------------------------------------------------------- 1 | MNSVLGNQTDVAGLFLVNSSEALERAVRCCTQASVVTDDGFAEGGPDERSLYIMRVVQIA 2 | VMCVLSLTVVFGIFFLGCNLLIKSEGMINFLVKDRRPSKEVEAVVVGPY 3 | -------------------------------------------------------------------------------- /10/10.2/Q0P585.fasta: -------------------------------------------------------------------------------- 1 | MPKRSCPFADAAPLQLKVHVGLKELSHGVFAERYSREVFGLPRTAPIACSSCMRSVDGKA 2 | VCSQCERALCGQCVYTCWGCGALACVLCGLADYADDGEKTLCTSCAMFEA 3 | -------------------------------------------------------------------------------- /10/10.2/Q0Z8U2.fasta: -------------------------------------------------------------------------------- 1 | MNSVLGNQTDVAGLFLANSSEALERAVRCCTQASVVTDDGFAEGGPDERSLYIMRVVQIA 2 | VMCVLSLTVVFGIFFLGCNLLIKSEGMINFLVKDRRPSKEVEAVVVGPY 3 | -------------------------------------------------------------------------------- /10/10.2/Q5U4F0.fasta: -------------------------------------------------------------------------------- 1 | MNPALGNQTDVAGLFLANSSEALERAVRCCTQASVVTDDGFAEGGPDERSLYIMRVVQIA 2 | VMCVLSLTVVFGIFFLGCNLLIKSEGMINFLVKDRRPSKEVEAVVVGPY 3 | -------------------------------------------------------------------------------- /10/10.2/Q62151.fasta: -------------------------------------------------------------------------------- 1 | MADTLPSEFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLK 2 | EYQENSDIVSDSPVWQDQILENEEAIALSRKDKTIQHVEVFCYARSTLLL 3 | -------------------------------------------------------------------------------- /10/10.2/Q9HCN2-4.fasta: -------------------------------------------------------------------------------- 1 | MGSSSEASFRSAQASCSGARRQGLGRGDQNLSVMPPNGRAQTHTPGWVSPCSENRDGLLP 2 | ATAPGRLCSHRGADIPSFQTHQDPVTASGSSELHADCPQFRALDRAGN 3 | -------------------------------------------------------------------------------- /10/10.2/Q9JJ72.fasta: -------------------------------------------------------------------------------- 1 | MNPALGNQTDVAGLFLANSSEALERAMRCCTQASVVTDDGFAEGGPDERSLYIMRVVQIA 2 | VMCVLSLTVVFGIFFLGCNLLIKSEGMINFLVKDRRPSKEVEAVVVGPY 3 | -------------------------------------------------------------------------------- /16/fasta_length_histgram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/16/fasta_length_histgram.png -------------------------------------------------------------------------------- /18/fasta_length_histgram.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/fasta_length_histgram.png -------------------------------------------------------------------------------- /10/10.2/O02703.fasta: -------------------------------------------------------------------------------- 1 | MQQEPDRNEQGYCSSPPSSNKQDSSDDTKKIQRREKNRIAAQKSRQRQTQKADSLHIESE 2 | NLERLNSALRGEISGLREELKYLTCVLSTHQPVCVLGPTKPQAILPHVGSTRYQH 3 | -------------------------------------------------------------------------------- /10/10.2/P14174.fasta: -------------------------------------------------------------------------------- 1 | MPMFVVNTNVPRASVPDGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCALC 2 | SLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNAANVGWNGSTFA 3 | -------------------------------------------------------------------------------- /10/10.2/P45983.fasta: -------------------------------------------------------------------------------- 1 | MPMFIVNTNVPRASVPEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALC 2 | SLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGWNGSTFA 3 | -------------------------------------------------------------------------------- /10/10.2/P45984.fasta: -------------------------------------------------------------------------------- 1 | MPMFVVNTNVPRASVPDGFLSELTQQLVQAMGKPAQYIAVHVVPDQLMAFGGSSEPCALC 2 | SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRIYINYYDMNAANVGWNGSTFA 3 | -------------------------------------------------------------------------------- /10/10.2/P49185.fasta: -------------------------------------------------------------------------------- 1 | MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALC 2 | SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTFA 3 | -------------------------------------------------------------------------------- /10/10.2/P62839.fasta: -------------------------------------------------------------------------------- 1 | MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL 2 | RSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 3 | -------------------------------------------------------------------------------- /10/10.2/Q07812-7.fasta: -------------------------------------------------------------------------------- 1 | MIAAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMG 2 | WTLDFLRERLLGWIQDQGGWDGLLSYFGTPTWQTVTIFVAGVLTASLTIWKKMG 3 | -------------------------------------------------------------------------------- /10/10.2/Q3MHP3.fasta: -------------------------------------------------------------------------------- 1 | MTCKMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIE 2 | HIMEDLDTNADKQLSFEEFIMLMARLTWASHEKMHEGDEGPGHHHKPGLGEGTP 3 | -------------------------------------------------------------------------------- /10/10.2/Q63495.fasta: -------------------------------------------------------------------------------- 1 | MKPPAEDLSDALCEFDAVLADFASPFHERHFHYEEHLERMKRRSSASVSDSSGFSDSESA 2 | DSLYRNSFSFSDEKLNSPTDSTPALLSATVTPQKAKLGDTKELEAFIADLDKTLASM 3 | -------------------------------------------------------------------------------- /10/10.2/Q63690.fasta: -------------------------------------------------------------------------------- 1 | MQQESDRNEQGYSSSPPSSNKQDSSDDTKKNHRREKNRIAAQKSRQRQTEKADSLHIESE 2 | NLERLNSALRGEISGLREELKYLTCVLSTHQPVCVLGPTKPQAILPHVGSTRYQH 3 | -------------------------------------------------------------------------------- /10/10.2/Q6NRS6.fasta: -------------------------------------------------------------------------------- 1 | MVLPALPAPPVCDSQNECVGWLGVAYSAVVDVIRAAAHEGVYIEPEARGRLDALREWIYY 2 | NYYTERAKRRDRRRRSVCHARTWFCFRKYDYVRRSIWHDTTTNTISVVSAHSVQ 3 | -------------------------------------------------------------------------------- /10/10.2/Q7Z2E3-7.fasta: -------------------------------------------------------------------------------- 1 | MQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFA 2 | GSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQE 3 | -------------------------------------------------------------------------------- /10/10.2/Q99674-4.fasta: -------------------------------------------------------------------------------- 1 | MLTAALAPGAANSPTTNPVILIVDKVLETQDLNGDGLMTPAELINFPGVALRPYPPYIGV 2 | GPNSNMCSRSDLPEDSNTLYPGSHLWLRHALNSKGNLDARLDGGEKAMQPQW 3 | -------------------------------------------------------------------------------- /13/smoking_and_lung_cancer.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/13/smoking_and_lung_cancer.txt -------------------------------------------------------------------------------- /15/15.2_need_of_project.txt: -------------------------------------------------------------------------------- 1 | 1.read sequences from file 2 | 2.sum for each frequency of N-seq 3 | 3.print the seq and position of predicted helix -------------------------------------------------------------------------------- /18/pic/small_pUC19 - copy.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/18/pic/small_pUC19 - copy.png -------------------------------------------------------------------------------- /10/10.2/O14763-2.fasta: -------------------------------------------------------------------------------- 1 | MEQRGQNAPAASGARKRHGPGPREARGARPGPRVPKTLVLVVAAVLLLVSAESALITQQD 2 | LAPQQRAAPQQKRSSPSEGLCPPGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCTR 3 | -------------------------------------------------------------------------------- /10/10.2/O15392-5.fasta: -------------------------------------------------------------------------------- 1 | MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 2 | FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIERALLAE 3 | -------------------------------------------------------------------------------- /10/10.2/O15392-6.fasta: -------------------------------------------------------------------------------- 1 | MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 2 | FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLVRETLPPPRSFIR 3 | -------------------------------------------------------------------------------- /10/10.2/O43474-6.fasta: -------------------------------------------------------------------------------- 1 | MRQPPGESDMAVSDALLPSFSTFASGPAGREKTLRQAGAPNNSSCHPVPACQRSPSQRGE 2 | DDRGPGKGPPPTLVITRAAAKPTQRVPISRHTCEPTQVRNLTTVTGTAVDGNSPAQMN 3 | -------------------------------------------------------------------------------- /10/10.2/O74954.fasta: -------------------------------------------------------------------------------- 1 | MAQEVSEYLSQNPRVAAWVETLRCEGETDKHWRHRREFLLRNAGDLVPATEETADAESGA 2 | RSRQLQQLVSFSMAWANHVFLGCRYPQKVMDKILSMAEGIKVTDAPIHTTRDELVAKKG 3 | -------------------------------------------------------------------------------- /10/10.2/O75414-3.fasta: -------------------------------------------------------------------------------- 1 | MASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFY 2 | REHEDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEGGVHYVAGTGGLGPA 3 | -------------------------------------------------------------------------------- /10/10.2/Q7Z6E9-4.fasta: -------------------------------------------------------------------------------- 1 | MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD 2 | NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPAMATTKAVCKNTISHFFYTLLLPL 3 | -------------------------------------------------------------------------------- /10/10.2/Q8N114-5.fasta: -------------------------------------------------------------------------------- 1 | MGFGATLAVGLTIFVLSVVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPP 2 | SVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGECPCQL 3 | -------------------------------------------------------------------------------- /10/10.2/Q9Y3C4.fasta: -------------------------------------------------------------------------------- 1 | MGSSSEASFRSAQASCSGARRQGLGRGDQNLSVMPPNGRAQTHTPGWVSDPLVLGAQVHG 2 | GCRGIEALSVSSGSWSSATVWILTGLSRPFLPGATVLRDRPLGSAFELSYDQKKAPLRLQ 3 | -------------------------------------------------------------------------------- /13/boxplot.csv: -------------------------------------------------------------------------------- 1 | 1.123,1.234,1.321,1.324,1.132 2 | 1.321,1.324,,1.123,1.234 3 | ,1.123,,1.321,1.132 4 | ,1.132,,1.123,1.123 5 | ,1.123,,1.234,1.321 6 | -------------------------------------------------------------------------------- /10/10.2/A0A1C4EE96.fasta: -------------------------------------------------------------------------------- 1 | MTDIFVFGSNLAGRHGAGAALYALKNKGAILFQGEGLQGQSYGIATKCDQLRTRGLIEIE 2 | KSVMEFIRFAESRPDLTFYVTPIGCGLAGYKREQIRPMFEHMPANCRFAETWDEPDVVAA 3 | -------------------------------------------------------------------------------- /10/10.2/O08674.fasta: -------------------------------------------------------------------------------- 1 | MLLQPAPCAPSAGFPRPLAAPGAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDI 2 | EEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRSLQT 3 | G 4 | -------------------------------------------------------------------------------- /10/10.2/O75807.fasta: -------------------------------------------------------------------------------- 1 | RATEKSVKTNGPLKQKQTTFSAKKVTEKTVKAKSSVPASDDNYPEIEKFFPFNPLDFESF 2 | DLPEEHQIAHLPLNGVPLMVLREERELEQLLHLGPPSPLNMPSPPWESDVLQSPSSILST 3 | L 4 | -------------------------------------------------------------------------------- /10/10.2/P35249.fasta: -------------------------------------------------------------------------------- 1 | MVDMMDLPRSRINAGMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLD 2 | EEISGIVEVVGRVTAKATILCTSYVQFKEDSHPFDLGLYNEAVKIIHDFPQFYPLGIVQH 3 | D 4 | -------------------------------------------------------------------------------- /10/10.2/P79892.fasta: -------------------------------------------------------------------------------- 1 | MSLHKSASFSLTFNQNTSIVSRSNSRTIFEAFKEFLDFWDIGNEVSAESAVRVSSNGAFN 2 | LPQSFGNESNEYAHLATPVDPAYGGNNTNNMMQFTNNLEILANNNSDGNNKINACNKFVC 3 | HKG 4 | -------------------------------------------------------------------------------- /10/10.2/Q15109-6.fasta: -------------------------------------------------------------------------------- 1 | MAAGTAVGAWVLVLSLWGAVVGAQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEA 2 | WKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNWWWSQKVE 3 | Q 4 | -------------------------------------------------------------------------------- /10/10.2/Q98UD2.fasta: -------------------------------------------------------------------------------- 1 | MRTQSLLLLGALLAVGSQLPAVFGRKKGEKSGGCPPDDGPCLLSVPDQCVEDSQCPLTRK 2 | CCYRACFRQCVPRVSVKLGSCPEDQLRCLSPMNHLCHKDSDCSGKKRCCHSACGRDCRDP 3 | ARG 4 | -------------------------------------------------------------------------------- /10/10.2/Q9Y5B9.fasta: -------------------------------------------------------------------------------- 1 | NCLPDWSVYEGYCYKVFKERMNWADAEKFCMKQVKDGHLVSFRNSKEVDFMISLAFPMLK 2 | MELVWIGLSDYWRDCYWEWSDGAQLDYKAWDNERHCFAAKTTDNQWMRRKCSGEFYFVCK 3 | CPA 4 | -------------------------------------------------------------------------------- /14/__pycache__/second.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/14/__pycache__/second.cpython-36.pyc -------------------------------------------------------------------------------- /__pycache__/neurons.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/__pycache__/neurons.cpython-36.pyc -------------------------------------------------------------------------------- /10/10.2/A4L9P5.fasta: -------------------------------------------------------------------------------- 1 | MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHI 2 | SQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQ 3 | MNWPPG 4 | -------------------------------------------------------------------------------- /10/10.2/D4A7E1.fasta: -------------------------------------------------------------------------------- 1 | MPHSSDSSDSSFSRSPPPGKQDSSDDVRKVQRREKNRIAAQKSRQRQTQKADTLHLESED 2 | LEKQNAALRKEIKQLTEEMKYFTSVLSSHEPLCSVLAPGAPSPPEVVYSTHAFHQPHVSS 3 | PRFQP 4 | -------------------------------------------------------------------------------- /10/10.2/F1QW76.fasta: -------------------------------------------------------------------------------- 1 | MPDNRQPRNRQPRIRSGNEPRSAPAMEPDGRGAWAHSRAALDRLEKLLRCSRCTNILREP 2 | VCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSMIQLCSKLRNLLHDNEL 3 | SGRHTFC 4 | -------------------------------------------------------------------------------- /10/10.2/F7EMX9.fasta: -------------------------------------------------------------------------------- 1 | MPHSSDSSDSSFSRSPPPGKQDSSDDVRKVQRREKNRIAAQKSRQRQTQKADTLHLESED 2 | LEKQNAALRKEIKQLTEELKYFTSVLSSHEPLCSVLASGTPSPPEVVYSAHAFHQPHISS 3 | PRFQP 4 | -------------------------------------------------------------------------------- /10/10.2/O02193.fasta: -------------------------------------------------------------------------------- 1 | MTSHSTSAQCSASDSACRISSEQISQVRPKLQLLKILHAAGAQGEVFTMKEVMHYLGQYI 2 | MVKQLYDQQEQHMVYCGGDLLGDLLGCQSFSVKDPSPLYDMLRKNLVTSASINTARCNRI 3 | LQSQKKN 4 | -------------------------------------------------------------------------------- /10/10.2/O35284.fasta: -------------------------------------------------------------------------------- 1 | MAQGSDNNDTSYTKSPSPGNKQGSSDDMRKVMRREKNRIAAQKSRMRQTQKADSLHLESE 2 | SLEKENAALRKEVKRLTEEAKYLSTVLSNHEPLCTGLSGASPELLYGAHHGAFHQHISVP 3 | HYPL 4 | -------------------------------------------------------------------------------- /10/10.2/O88904.fasta: -------------------------------------------------------------------------------- 1 | MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHI 2 | SQISVAEDDNESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQ 3 | MHWPPG 4 | -------------------------------------------------------------------------------- /10/10.2/O95388-4.fasta: -------------------------------------------------------------------------------- 1 | MRWFLPWTLAAVTAAAASTVLATAGKKCLAVYQPEASMNFTLAGCISTRSYQPKYCGVCM 2 | DNRCCIPYKSKTIDVSFQCPDGLGFSRQVLWINACFCNLSCRNPNDIFADLESYPDFSEI 3 | AN 4 | -------------------------------------------------------------------------------- /10/10.2/P09619.fasta: -------------------------------------------------------------------------------- 1 | MTAAATVLKEGVLEKRSGGLLQLWKRKRCVLTERGLQLFEAKGTGGRPKELSFSRIKAVE 2 | CVESTGRHIYFTLVTEGGGEIDFRCPLEDPGWNAQITLGLVKFKNQQAIQTVRARQSLGT 3 | GTLVS 4 | -------------------------------------------------------------------------------- /10/10.2/P43360.fasta: -------------------------------------------------------------------------------- 1 | MSLEQKSQHCKPEEGLDTQEEALGLVGVQAATTEEQEAVSSSSPLVPGTLGEVPAAGSPG 2 | PLKSPQGASAIPTAIDFTLWRQSIKGSSNQEEEGPSTSPDPESVFRAALSKKVADLIHFL 3 | LLKY 4 | -------------------------------------------------------------------------------- /10/10.2/P50947.fasta: -------------------------------------------------------------------------------- 1 | MNQCKVMNDGYLEKRSNGLLQLWKKKRCVLSDEGLRLYGCKGDSGKEMRFEQMTTLDCVE 2 | YKRGLVYFTIVMNDGKEVDFRCQQEGTAWNAEIALALVRFKNRVAVQTGRNRHLSHLGSC 3 | GEGDVEL 4 | -------------------------------------------------------------------------------- /10/10.2/P62950.fasta: -------------------------------------------------------------------------------- 1 | MPHSSDSSDSSFSRSPPPGKQDSSDDVRRVQRREKNRIAAQKSRQRQTQKADTLHLESED 2 | LEKQNAALRKEIKQLTEELKYFTSVLNSHEPLCSVLAASTPSPPEVVYSAHAFHQPHVSS 3 | PRFQP 4 | -------------------------------------------------------------------------------- /10/10.2/P62959.fasta: -------------------------------------------------------------------------------- 1 | MADEIAKAQVAQPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHI 2 | SQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQ 3 | MNWPPG 4 | -------------------------------------------------------------------------------- /10/10.2/P62986.fasta: -------------------------------------------------------------------------------- 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 2 | IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN 3 | LRPKKKVK 4 | -------------------------------------------------------------------------------- /10/10.2/P62987.fasta: -------------------------------------------------------------------------------- 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 2 | IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN 3 | LRPKKKVK 4 | -------------------------------------------------------------------------------- /10/10.2/P68036-3.fasta: -------------------------------------------------------------------------------- 1 | MAASRRLMKDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISA 2 | ENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRP 3 | VD 4 | -------------------------------------------------------------------------------- /10/10.2/P70349.fasta: -------------------------------------------------------------------------------- 1 | MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIYEDDQCLAFHDISPQAPTHFLVIPKKYI 2 | SQISAAEDDDESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQ 3 | MNWPPG 4 | -------------------------------------------------------------------------------- /10/10.2/Q15572.fasta: -------------------------------------------------------------------------------- 1 | MADEEEDPTFEEENEEIGGGAEGGQGKRKRLFSKELRCMMYGFGDDQNPYTESVDILEDL 2 | VIEFITEMTHKAMSIGRQGRVQVEDIVFLIRKDPRKFARVKDLLTMNEELKRARKAFDEA 3 | NYGS 4 | -------------------------------------------------------------------------------- /10/10.2/Q3V016.fasta: -------------------------------------------------------------------------------- 1 | MADEIAKAQVAQPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHI 2 | SQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQ 3 | MNWPPG 4 | -------------------------------------------------------------------------------- /10/10.2/Q4V793.fasta: -------------------------------------------------------------------------------- 1 | MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHI 2 | SQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQ 3 | MHWPPG 4 | -------------------------------------------------------------------------------- /10/10.2/Q5BJX1.fasta: -------------------------------------------------------------------------------- 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 2 | IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN 3 | LRPKKKVK 4 | -------------------------------------------------------------------------------- /10/10.2/Q5EAJ6.fasta: -------------------------------------------------------------------------------- 1 | MHKEEHEVAVLGPPPSTILPRSTVINIHSETSVPDHVVWSLFNTLFLNWCCLGFIAFAYS 2 | VKSRDRKMVGDVTGAQAYASTAKCLNIWALILGILMTIGFILLLVFGSVTVYHIMLQIIQ 3 | EKRGY 4 | -------------------------------------------------------------------------------- /10/10.2/Q63934.fasta: -------------------------------------------------------------------------------- 1 | MGLAGVCALRRSAGYILVGGAGGQSAAAAARRYSEGEWASGGVRSFSRAAAAMAPIKVRL 2 | LADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPN 3 | IISQL 4 | -------------------------------------------------------------------------------- /10/10.2/Q6PF35.fasta: -------------------------------------------------------------------------------- 1 | MMMGNVHVAALLLNYGADSNCEDPTTFSRPVHDAAREGFLDTLVVLHGSGARLDVRDAWG 2 | RLPLDLAQERGHQDIVRYLRSAGCSLCSAGWSLCTAGNVAQTDGHSFSSSTPRALELRGQ 3 | SQEQS 4 | -------------------------------------------------------------------------------- /10/10.2/Q8N2F6.fasta: -------------------------------------------------------------------------------- 1 | MLLRLERILRRGPHRNPGPGDDDGQRSRSSSSAQLRCRFELRGPHYLLPPGARRSAGRLP 2 | GHAGGAARVRGSAGCARCLGSPAARLGPRAGTSRHRAIFAFRWVLFVFRWVVFVYRWERR 3 | PDRRA 4 | -------------------------------------------------------------------------------- /10/10.2/Q8N2W9.fasta: -------------------------------------------------------------------------------- 1 | MTAAATATVLKEGVLEKRSGGLLQLWKRKRCVLTERGLQLFEAKGTGGRPKELSFARIKA 2 | VECVESTGRHIYFTLVTEGGGEIDFRCPLEDPGWNAQITLGLVKFKNQQAIQTVRARQSL 3 | GTGTLVS 4 | -------------------------------------------------------------------------------- /10/10.2/Q96E14.fasta: -------------------------------------------------------------------------------- 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 2 | IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN 3 | LRPKKKVK 4 | -------------------------------------------------------------------------------- /10/10.2/Q96EQ8.fasta: -------------------------------------------------------------------------------- 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 2 | IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN 3 | LRPKKKVK 4 | -------------------------------------------------------------------------------- /10/10.2/Q99732.fasta: -------------------------------------------------------------------------------- 1 | MTTDLEGSDMLVEKADRREFIDLLKKMLTIDADKRVTPIETLNHPFVTMTHLLDFPHSAH 2 | VKSCFQNMEICKRRVNMYDTVNQSKTPFITHVAPSTSTNLTMTFNNQLTTVHNQKSQLIG 3 | LSPES 4 | -------------------------------------------------------------------------------- /10/10.2/Q99PV8.fasta: -------------------------------------------------------------------------------- 1 | MPHSSDSSDSSFSRSPPPGKQDSSDDVRKVQRREKNRIAAQKSRQRQTQKADTLHLESED 2 | LEKQNAALRKEIKQLTEELKYFTSVLSSHEPLCSVLASGTPSPPEVVYSAHAFHQPHISS 3 | PRFQP 4 | -------------------------------------------------------------------------------- /10/10.2/Q9BRA0-2.fasta: -------------------------------------------------------------------------------- 1 | MAGAGPTMLLREENGCCSRRQSSSSAGDSDGEREDSAAERARQQLEALLNKTMRIRMTDG 2 | RTLVGCFLCTDRDCNVILGSAQEFLKPSDSFSAGEPRVLGLAMVPGHHIVSIEVQRESLT 3 | GPPYL 4 | -------------------------------------------------------------------------------- /10/10.2/Q9BV47.fasta: -------------------------------------------------------------------------------- 1 | MLCFLRGMAFVPFLLVTWSSAAFIISYVVAVLSGHVNPFLPYISDTGTTPPESGIFGFMI 2 | NFSAFLGAATMYTRYKIVQKQNQTCYFSTPVFNLVSLVLGLVGCFGMGIVANFQSVTLRI 3 | STEINGDI 4 | -------------------------------------------------------------------------------- /10/10.2/Q9HCN2-2.fasta: -------------------------------------------------------------------------------- 1 | MGSSSEASFRSAQASCSGARRQGLGRGDQNLSVMPPNGRAQTHTPGWVSDPLVLGAQVHG 2 | GCRGIEALSVSSGSWSSATVWILTGLGLGLSRPFLPGATVLRDRPLGSAFELSYDQKKAP 3 | LRLQ 4 | -------------------------------------------------------------------------------- /10/10.2/Q9NYY3.fasta: -------------------------------------------------------------------------------- 1 | MTAAATVLKEGVLEKRSGGLLQLWKRKRCVLTERGLQLFEAKGTGGRPKELSFARIKAVE 2 | CVESTGRHIYFTLVTEGGGEIDFRCPLEDPGWNAQITLGLVKFKNQQAIQTVRARQSLGT 3 | GTLVS 4 | -------------------------------------------------------------------------------- /10/10.2/Q9ULZ0-3.fasta: -------------------------------------------------------------------------------- 1 | MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 2 | CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 3 | SFSG 4 | -------------------------------------------------------------------------------- /13/histgram.csv: -------------------------------------------------------------------------------- 1 | 1,0.3 2 | 2,0.5 3 | 3,0.6 4 | 4,0.7 5 | 4,0.9 6 | 5,0.6 7 | 2,0.3 8 | 3,0.2 9 | 2,0.9 10 | 1,0.6 11 | 5,0.7 12 | 6,0.5 13 | 4,0.3 14 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/02-data_management/06-filtering_data/list_old.txt: -------------------------------------------------------------------------------- 1 | a 2 | b 3 | c 4 | d 5 | e 6 | f 7 | g 8 | h 9 | i 10 | l 11 | -------------------------------------------------------------------------------- /10/10.2/A0A1C2B7M1.fasta: -------------------------------------------------------------------------------- 1 | MTIKTFFTIIAVLALVHGVGFVLAPEQVATSYGMTTSPSSVLMARLFGAALLALGLIFWF 2 | ARDNSSESVRGVLIATVIANTVGLVVVVMGTMAGTMNSMGWVAALIYLFGAAGCGYFVMA 3 | RSPQLSSR 4 | -------------------------------------------------------------------------------- /10/10.2/A2T7F2.fasta: -------------------------------------------------------------------------------- 1 | MLSPEAERVLRYLVEVEELAEEVLADKRQIVDLDTKRNQNREGLRALQKDLSLSEDVMVC 2 | FGNMFIKMPHPETKEMIEKDQDHLDKEIEKLRKQLKVKVDRLFEAQGKPELKGFNLNPLN 3 | QDELKALKIILKG 4 | -------------------------------------------------------------------------------- /10/10.2/G5EDF7.fasta: -------------------------------------------------------------------------------- 1 | MGFGATVAIGLTVFVVFIATIIVCFTCSCCCLYKMCCRPRPVVSNTTTTTVVHTAYPQPQ 2 | PVAPSYPGPTYQGYHPMPPQPGMPAAPYPTQYPPPYLAQSTGPPAYHETLAGASQPPYNP 3 | AYMDPPKAVP 4 | -------------------------------------------------------------------------------- /10/10.2/O15151-3.fasta: -------------------------------------------------------------------------------- 1 | MTSFSTSAQCSTSDSACRISPGQINQVRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYI 2 | MVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRKNLVTSASNNTARCNRI 3 | LQSQKKN 4 | -------------------------------------------------------------------------------- /10/10.2/O15151-4.fasta: -------------------------------------------------------------------------------- 1 | MTSFSTSAQCSTSDSACRISPGQINQVRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYI 2 | MVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRKNLVTSASNNTDAAQTL 3 | ALAQDHT 4 | -------------------------------------------------------------------------------- /10/10.2/P17679.fasta: -------------------------------------------------------------------------------- 1 | MTLEEFSAGEQKTESDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSN 2 | PGRLAELLLLETDAGPAASEGAEQPPDLHCVLVTNPHSSQWKDPALSQLICFCRESRYMD 3 | QWVPVINLPER 4 | -------------------------------------------------------------------------------- /10/10.2/P48963.fasta: -------------------------------------------------------------------------------- 1 | MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGAATTVTVLQGEIFEGAPVQ 2 | TVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKA 3 | YIYTYKRLC 4 | -------------------------------------------------------------------------------- /10/10.2/Q42578.fasta: -------------------------------------------------------------------------------- 1 | MVSPEADRVLRYLVEVEELAEAVLSDKRQIVDLDTKRNQNREGLRALQKDPSVSEDVMVC 2 | FGNMFIKMPHLKTKEMIQKDQEHLDKEIERLRSQLKVKVNRLLEAQGKPELKGFNLNPLN 3 | QDELKALQVILKG 4 | -------------------------------------------------------------------------------- /10/10.2/Q5RFA9.fasta: -------------------------------------------------------------------------------- 1 | MLSPEAERVLRYLVEVEELAEEVLADKRQIVDLDTKRNRNREGLRALQKDLSLTEDVMVC 2 | FGNMFIRMPHPETKEMIEKDQEHLDKEIERLRKQLKVKVNRLFEAQGKPELKGFNLTPLN 3 | QDELKALKVILKG 4 | -------------------------------------------------------------------------------- /10/10.2/Q6P773.fasta: -------------------------------------------------------------------------------- 1 | MANSTAVVKIPGTPGAGGRLSPENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADD 2 | FIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQ 3 | RMALIRKTTKK 4 | -------------------------------------------------------------------------------- /10/10.2/Q80ZG6.fasta: -------------------------------------------------------------------------------- 1 | MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPGALAGGPTQA 2 | APGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPLP 3 | RGHRAPEMEPN 4 | -------------------------------------------------------------------------------- /10/10.2/Q91ZX6.fasta: -------------------------------------------------------------------------------- 1 | DQDCLSGWSFYEGHCYQLFRLKTWDEAEKYCNQWDGGHLVSIESNAKAEFVAQLISRKLP 2 | KSAIEDRVWIGLRDRSKREQCGHLWTDNSFVHYEHVVPPTKCFVLERQTEFRKWIAVNCE 3 | FKFPFVCKAKIPR 4 | -------------------------------------------------------------------------------- /10/10.2/Q922Y0.fasta: -------------------------------------------------------------------------------- 1 | MGIVANFQELAVPVVHDGGALLAFVCGVVYTLLQSIISYKSCPQWNSLTTCHVRMAISAV 2 | SCAAVVPMIACASLISITKLEWNPKEKDYIYHVVSAICEWTVAFGFIFYFLTFIQDFQSV 3 | TLRISTEINDDF 4 | -------------------------------------------------------------------------------- /10/10.2/Q9BY49.fasta: -------------------------------------------------------------------------------- 1 | MLSPEAERVLRYLVEVEELAEAVLSDKRQIVDLDTKRNQNREGLRALQKDLSVSEDVMVC 2 | FGNMFIKMPHPKTKEMIQKDQEHLDKEIERLRSQLKVKVNRLFEAQGKPELKGFNLNPLS 3 | PDEVKALKVILKG 4 | -------------------------------------------------------------------------------- /10/10.2/Q9EQ61.fasta: -------------------------------------------------------------------------------- 1 | MLSPEAERVLRYLVEVEELAEEVLADKRQIVDLDTKRNQNREGLRALQKDLSLSEDVMVC 2 | FGNMFIKMPHPETKEMIEKDQDHLDKEIEKLRKQLKVKVNRLFEAQGKPELKGFNLNPLN 3 | QDELKALKVILKG 4 | -------------------------------------------------------------------------------- /10/10.2/Q9ESK4.fasta: -------------------------------------------------------------------------------- 1 | MNHIVQTFSPVNSGQPPNYEMLKEEQEVAMLGVPHNPAPPMSTVIHIRSETSVPDHVVWS 2 | LFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWALILGIFMTILL 3 | IIIPVLVVQAQR 4 | -------------------------------------------------------------------------------- /10/10.2/P29067.fasta: -------------------------------------------------------------------------------- 1 | MSAALLRRGLELLAASEAPRDPPGQAKPRGAPVKRPRKTKAIQAQKLRNSAKGKVPKSAL 2 | DEYRKRECRDHLRVNLKFLTRTRSTVAESVSQQILRQNRGRKACDRPVAKTKKKKAEGTV 3 | FTEEDFQKFQQEYFGS 4 | -------------------------------------------------------------------------------- /10/10.2/P63050.fasta: -------------------------------------------------------------------------------- 1 | MGFLTAVTQGLVRGADRMSKWTSKRGPRTFTKSRGAKKTGFYTNRKFVQIKEMVPEFVVP 2 | DLTGFKLKPYVNYRAPAGIDTPLTAKALFLETVAPAIEKDFKEGTFDANNLEKYGFEPTQ 3 | EGKLFQLYPKNFPR 4 | -------------------------------------------------------------------------------- /10/10.2/P97452.fasta: -------------------------------------------------------------------------------- 1 | MIRPSVYRNVARQLHISLQSEPVVTDAFLAVAGHIFSAGITWGKVVSLYAVAAGLAVDCV 2 | RQAQPAMVHALVDCLGEFVRKTLATWLRRRGGWTDVLKCVVSTDPGLRSHWLVAALCSFG 3 | RFLKAAFFVLLPER 4 | -------------------------------------------------------------------------------- /10/10.2/Q00987-7.fasta: -------------------------------------------------------------------------------- 1 | MCNTNMSVPTDGAVTTSQIPASEQETLVRQESEDYSQPSTSSSIIYSSQEDVKEFEREET 2 | QDKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCR 3 | QPIQMIVLTYFP 4 | -------------------------------------------------------------------------------- /10/10.2/Q5BN46-2.fasta: -------------------------------------------------------------------------------- 1 | MAEECPRACAEPVAPKATAPPERTSDYYRVSADLPGRFNNPGWFRGYRTQKAVSVYRTSN 2 | QAYGSRAPTVHEMPKVFYPNSNKFSQQLAAGGMFRNNTLNVYLEKSIVTGPDNCITSCDR 3 | LNFHPSYNINRPSICD 4 | -------------------------------------------------------------------------------- /10/10.2/Q5PPL1.fasta: -------------------------------------------------------------------------------- 1 | MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEV 2 | VFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVR 3 | LVEVGGDVQLDSVRIF 4 | -------------------------------------------------------------------------------- /10/10.2/Q5XHH7.fasta: -------------------------------------------------------------------------------- 1 | MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTREGVVQGVASVAEKTK 2 | EQASHLGGAVFSGAGNIAAATGLVKREEFPTDLKPEEVAQEAAEEPLIEPLMEPEGESYE 3 | DPPQEEYQEYEPEA 4 | -------------------------------------------------------------------------------- /10/10.2/Q5XIH2.fasta: -------------------------------------------------------------------------------- 1 | MGFGATLAVGLTIFVLSVVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPP 2 | SVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPA 3 | SQPPYNPAYMDAPKAAL 4 | -------------------------------------------------------------------------------- /10/10.2/Q5ZKY2.fasta: -------------------------------------------------------------------------------- 1 | MGRARDAILDALENLTAEELKKFKLQAATHQGSGAAPAGIQAPPQSAAKPGLHFIDQHRA 2 | ALIARVTNVEWLLDALYGKVLTDEQYQAVRAEPTNPSKMRKLFSFTPAWNWTCKDLLLQA 3 | LRESQSYLVEDLERS 4 | -------------------------------------------------------------------------------- /10/10.2/Q7TPV4.fasta: -------------------------------------------------------------------------------- 1 | MDKVLNREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYK 2 | KMEDGVKYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSSDDEATADS 3 | QHSTPPKKKRKALLT 4 | -------------------------------------------------------------------------------- /10/10.2/Q7YRZ2.fasta: -------------------------------------------------------------------------------- 1 | MPGKKARKNAQPSPARAPAGPAGTAGTARDQAGFAIGMQLRFTRGKKLLSSSLSSSPLAL 2 | PRGHEEQVQVAGSRVCYSTQEIWRQTELPAETSESDIQTLLLRNLTASKTCMRGLLQKSF 3 | LRRCTFHQFEERLHCN 4 | -------------------------------------------------------------------------------- /10/10.2/Q86WX3.fasta: -------------------------------------------------------------------------------- 1 | MSAALLRRGLELLGAPEAPGAAPGHTKPSQAPMKRTRKAKATQAQKLRNSAKGKVPKSAL 2 | AEFRKKERRGYLGVNLRFMTSARSTVDESVTRQIMRQNRGRKACDRPVTKTKKKKKAEGT 3 | VFTEEDFQKFQREYFGS 4 | -------------------------------------------------------------------------------- /10/10.2/Q8N726-2.fasta: -------------------------------------------------------------------------------- 1 | MVRRFLVTLRIRRACGPPRVRVFVVHIPRLTGEWAAPGAPAAVALVLMLLRSQRLGQQPL 2 | PRRPGHDDGQRPSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGAAPGRGAAGR 3 | ARCLGPSARGPG 4 | -------------------------------------------------------------------------------- /10/10.2/Q8TDN4-4.fasta: -------------------------------------------------------------------------------- 1 | MNETFKEKFPHIKLTLSKIRSLKREMRKLAQEDCGLEEPTVAMAFVYFEKLALKGKLNKQ 2 | NRKLCAGACVLLAAKIGSDLKKHEVKHLIDKLEEKFRLNRRELIAFEFPVLVALEFALHL 3 | PEHEVMPHYRRLVQSS 4 | -------------------------------------------------------------------------------- /10/10.2/Q99674-3.fasta: -------------------------------------------------------------------------------- 1 | MLPLTMTVLILLLLPTGQAAPKDGVTRPDSEVQHQLLPNPFQPGQEQLGLLQSYLKGLGR 2 | TEVQLEHLSREQVLLYLFALHDYDQSGQLDGLELLSMLTAALAPGAANSPTTNPGNLDAR 3 | LDGGEKAMQPQW 4 | -------------------------------------------------------------------------------- /10/10.2/Q9D7I0-5.fasta: -------------------------------------------------------------------------------- 1 | MGFGATVAIGVTIFVVFIATIIICFTCSCCCLYKMCCPQRPVVTNTTTTTVVHAPYPQPQ 2 | PQPVAPSYPGPTYQGYHPMPPQPGMPAAPYPTQYPPPYLAQPTGPPPYHESLAGASQPPY 3 | NPTYMDSLKTIP 4 | -------------------------------------------------------------------------------- /10/10.2/Q9D9R0.fasta: -------------------------------------------------------------------------------- 1 | MGVLAAAARCLVRGADRMSKWTSKRGPRSFRGRKGRGAKGIGFLTSGWRFVQIKEMVPEF 2 | VVPDLTGFKLKPYVSYLAPESEETPLTAAQLFSEAVAPAIEKDFKDGTFDPDNLEKYGFE 3 | PTQEGKLFQLYPRNFLR 4 | -------------------------------------------------------------------------------- /10/10.2/Q9H9A7.fasta: -------------------------------------------------------------------------------- 1 | MGFLTAVTQGLVRGADRMSKWTSKRGPRTFTKSRGAKKTGIYTSDRKFVQIKEMVPEFVV 2 | PDLTGFKLKPYVNYRAPAGIDTPLTAKALFQETVAPAIEKDFKEGTFDANNLEKYGFEPT 3 | QEGKLFQLYPKNFPR 4 | -------------------------------------------------------------------------------- /10/10.2/Q9ULZ0-2.fasta: -------------------------------------------------------------------------------- 1 | MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 2 | CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 3 | RHAQCGPSLGLG 4 | -------------------------------------------------------------------------------- /10/10.2/A2RV80.fasta: -------------------------------------------------------------------------------- 1 | MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 2 | AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 3 | SSATVGPKAPAVGKKASQASQEY 4 | -------------------------------------------------------------------------------- /10/10.2/O15392-4.fasta: -------------------------------------------------------------------------------- 1 | MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 2 | FKELEGWEPDDDPMQRKPTIRRKNLRKLRRKCAVPSSSWLPWIEASGRSCLVPEWLHHFQ 3 | GLFPGATSLPVGPLAMS 4 | -------------------------------------------------------------------------------- /10/10.2/O35473.fasta: -------------------------------------------------------------------------------- 1 | MAGGEMNEDYPVEIHESLSALESSLGAVDDMLKTMMSVSRNELLQKLDPLEQAKVDLVSA 2 | YTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAAKLDRGAASRFVKN 3 | ALWEPKQKNTPNVANKGKSKH 4 | -------------------------------------------------------------------------------- /10/10.2/O70526.fasta: -------------------------------------------------------------------------------- 1 | MAGEEINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSA 2 | YTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKN 3 | ALWEPKSKNASKVANKGKSKS 4 | -------------------------------------------------------------------------------- /10/10.2/O74412.fasta: -------------------------------------------------------------------------------- 1 | MAGEEINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSA 2 | YTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKN 3 | ALWEPKPKNASKVANKGKSKS 4 | -------------------------------------------------------------------------------- /10/10.2/O95996.fasta: -------------------------------------------------------------------------------- 1 | MSAALVRRGLELLAASEAPRAVPGQVQASGTPAKRTRRARAKASQALKLRNSAKGKAPKS 2 | ALAEYQKRQCRDHLKANLKFMTSMRSTVPESVTQQILQQNQGRKACDRLVAKTKNKKKKK 3 | KKAEGTVFTEEDFQKFQREYFGS 4 | -------------------------------------------------------------------------------- /10/10.2/O96017-11.fasta: -------------------------------------------------------------------------------- 1 | MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 2 | SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKS 3 | CEYCFDEPLLEFRSYSFYLP 4 | -------------------------------------------------------------------------------- /10/10.2/P04492.fasta: -------------------------------------------------------------------------------- 1 | MEIWTVLEDFHKTRQLLENASNGVSHLWRFCFGGDLAKLVYRAKQDYREQFEDILRECPS 2 | LFDALNLGHQSHFNQRISRALDFTTPGRTTAAVAFFAFIFDKWSQETHFSRDYQLDFLAV 3 | ALWRTWKCQRLNAIPATCRYSR 4 | -------------------------------------------------------------------------------- /10/10.2/P55215.fasta: -------------------------------------------------------------------------------- 1 | MAGEEMNEDYPVEIHESLTALESSLGAVDDMLKTMMAVSRNELLQKLDPLEQAKVDLVSA 2 | YTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAAKLDRGAASRFVKN 3 | ALWEPKAKSTPKVANKGKSKH 4 | -------------------------------------------------------------------------------- /10/10.2/P57059.fasta: -------------------------------------------------------------------------------- 1 | MGFGTLVAIGVIVFAVVVITIILCLTCSCCCLYKACRRPQPVVTTTTATTVVHAPYPQQQ 2 | GVPPSYPAAPYQGYQPVAIQPQPGMPVAPYPAQYPPPYPMQPPDPPAYHETVAAGAGAPY 3 | PISQPPYNPAYMDPQKPTY 4 | -------------------------------------------------------------------------------- /10/10.2/Q15078.fasta: -------------------------------------------------------------------------------- 1 | MDKFWWHAAWGLCLVPLSLAQIDLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTL 2 | PTMAQMEKALSIGFETCSLHCSQQSKKVWAEEKASDQQWQWSCGGQKAKWTQRRGQQVSG 3 | NGAFGEQGVVRNSRPVYDS 4 | -------------------------------------------------------------------------------- /10/10.2/Q2KIE4.fasta: -------------------------------------------------------------------------------- 1 | MAAAAELSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYL 2 | LGSTAEEKAIVQQWLEYRVTQVDGHSSKNDIHTLLKDLNSYLEDKVYLTGYNFTLADILL 3 | YYGLHRFIIRKLRHTEVGN 4 | -------------------------------------------------------------------------------- /10/10.2/Q62151-8.fasta: -------------------------------------------------------------------------------- 1 | MPAGTAARAWVLVLALWGAVAGGQNITARIGEPLVLSCKGAPKKPPQQLEWKLNTGRTEA 2 | WKVLSPQGGPWDSVARILPNGSLLLPATGIVDEGTFRCRATNRRGKEVKSNYRVRVYRKG 3 | PRLSHFAFIKKPSCTPNP 4 | -------------------------------------------------------------------------------- /10/10.2/Q62151-9.fasta: -------------------------------------------------------------------------------- 1 | MPAGTAARAWVLVLALWGAVAGGQNITARIGEPLVLSCKGAPKKPPQQLEWKLNTGRTEA 2 | WKVLSPQGGPWDSVARILPNGSLLLPATGIVDEGTFRCRATNRRGKEVKSNYRVRVYQKP 3 | AMRGQLKALWVSLGWVR 4 | -------------------------------------------------------------------------------- /10/10.2/Q7LG56-4.fasta: -------------------------------------------------------------------------------- 1 | MGDPERPEAAGLDQDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPV 2 | GLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQ 3 | RFAVMAETTDNVFTLDADF 4 | -------------------------------------------------------------------------------- /10/10.2/Q8N114-4.fasta: -------------------------------------------------------------------------------- 1 | MGFGATLAVGLTIFVLSVVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPP 2 | SVPPSYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQPMGPPAYHETLAGGAAAPYPA 3 | SQPPYNPAYMDAPKAAL 4 | -------------------------------------------------------------------------------- /10/10.2/Q8N2Z9-2.fasta: -------------------------------------------------------------------------------- 1 | MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 2 | FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED 3 | GSKNSRQPAEAGVVESEN 4 | -------------------------------------------------------------------------------- /10/10.2/Q969K3.fasta: -------------------------------------------------------------------------------- 1 | MKSEYQNCAECGTLVCLSDMRAHIRTCEKYIDKYGPLLELGDTTARCVCPFCQRELDEDC 2 | LLDHCIIHHRSERRPVFCPLCHSRPDESPSTFNGSLIRHLQVSHTLFYDDFIDFDIIEEA 3 | IIRRVLDRSLLEYVNQSNTT 4 | -------------------------------------------------------------------------------- /10/10.2/Q9ESJ1.fasta: -------------------------------------------------------------------------------- 1 | MAGEGINEDYPVEIHEYLSTFENSIGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSA 2 | YTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAGKLDRGAASRFVKN 3 | ALWEPKPKNASKVANKGKSKN 4 | -------------------------------------------------------------------------------- /10/10.2/Q9H4X1-2.fasta: -------------------------------------------------------------------------------- 1 | MKPPAAQGSPAAAAAAAPALDSAAAEDLSDALCEFDAVLADFASPFHERHFHYEEHLERM 2 | KRRSSASVSDSSGFSDSESADSLYRNSFSFSDEKLNSPTDSTPALLSATVTPQKAKLGDT 3 | KELEAFIADLDKTLASM 4 | -------------------------------------------------------------------------------- /__pycache__/ion_channel_module.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/__pycache__/ion_channel_module.cpython-36.pyc -------------------------------------------------------------------------------- /10/10.2/A5PJC4.fasta: -------------------------------------------------------------------------------- 1 | MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDRDKYNRISREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/A5PJS6.fasta: -------------------------------------------------------------------------------- 1 | MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 2 | PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV 3 | PDIAQIYKSDKEKYNRHAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/D3ZDK2.fasta: -------------------------------------------------------------------------------- 1 | MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDRDKYNRISREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/O14933.fasta: -------------------------------------------------------------------------------- 1 | MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 2 | PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV 3 | PDIAQIYKSDKEKYNRHAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/O15205.fasta: -------------------------------------------------------------------------------- 1 | MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDREKYNRIAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/O15392-2.fasta: -------------------------------------------------------------------------------- 1 | MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 2 | FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK 3 | KKEFEETAKKVRRAIEQLAAMD 4 | -------------------------------------------------------------------------------- /10/10.2/P45974.fasta: -------------------------------------------------------------------------------- 1 | MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDRDKYNRISREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P51668.fasta: -------------------------------------------------------------------------------- 1 | MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 2 | PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV 3 | PDIAQIYKSDKEKYNRHAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P61077.fasta: -------------------------------------------------------------------------------- 1 | MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDRDKYNRISREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P61078.fasta: -------------------------------------------------------------------------------- 1 | MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDREKYNRIAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P61079.fasta: -------------------------------------------------------------------------------- 1 | MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDRDKYNRISREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P61086.fasta: -------------------------------------------------------------------------------- 1 | MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 2 | PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV 3 | PDIAQIYKSDKEKYNRHAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P62750.fasta: -------------------------------------------------------------------------------- 1 | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 2 | HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 3 | RKAKSRQVGKEKGKYKEETIEKMQE 4 | -------------------------------------------------------------------------------- /10/10.2/P62837.fasta: -------------------------------------------------------------------------------- 1 | MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEY 2 | PFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLV 3 | PEIAQIYKTDRDKYNRTAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P62838.fasta: -------------------------------------------------------------------------------- 1 | MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDREKYNRIAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/Q06AA9.fasta: -------------------------------------------------------------------------------- 1 | MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEY 2 | PFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLV 3 | PEIAQIYKTDRDKYNRTAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/Q07812-5.fasta: -------------------------------------------------------------------------------- 1 | MDGSGEQPRGGGPTSSEQIMKTGALLLQGMIAAVDTDSPREVFFRVAADMFSDGNFNWGR 2 | VVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGTPT 3 | WQTVTIFVAGVLTASLTIWKKMG 4 | -------------------------------------------------------------------------------- /10/10.2/Q4R5N4.fasta: -------------------------------------------------------------------------------- 1 | MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDREKYNRIAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/Q6AYQ4.fasta: -------------------------------------------------------------------------------- 1 | MQVLTKRYPKNCLLTVMDRYAAEVHNMEQVVMIPSLLRDVQLSGPGGQAQAEAPDLYTYF 2 | TMLKAICVDVDHGLLPREEWQAKVAGSEENGTAETEEVEDESASGELDLEAQFHLHFSSL 3 | HHILMHLTEKAQEVTRKYQEMTGQVW 4 | -------------------------------------------------------------------------------- /10/10.2/Q80TT8-4.fasta: -------------------------------------------------------------------------------- 1 | MARALRGPGPRSSLDQHVAAVLATVQISSLDTNLQLSGLCALSQAVEEVTERDHPLVRPD 2 | RPLREKLVKTLVDLLTNQVGEKMVVVMALRLLYLLMTKHEWRPLFAREGGIYAVLICMQE 3 | YKTSVLVQQAGLAVSTLGRAGQSD 4 | -------------------------------------------------------------------------------- /10/10.2/Q96GD4-4.fasta: -------------------------------------------------------------------------------- 1 | MAQKENSYPWPYGRQTAPSGLSTLPQRVLRKEPVTPSALVLMSRSNVQPTAAPGQKVMEN 2 | SSGTPDILTRRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE 3 | HQLRREIEIQAHLQSWRSWQML 4 | -------------------------------------------------------------------------------- /10/10.2/Q9JIX3.fasta: -------------------------------------------------------------------------------- 1 | MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ 2 | TTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKH 3 | DKEDFPASWRSEEEMAAEAAALRVYFQ 4 | -------------------------------------------------------------------------------- /10/10.2/Q9NXR8.fasta: -------------------------------------------------------------------------------- 1 | MSHNSQAFLSTNAGLPPSYETIKEEYGVTELGEPSNSAVVRTTVINMPREVSVPDHVVWS 2 | LFNTLFFNACCLGFVAYAYSVKSRDRKMVGDVVGAQAYASTAKCLNISSLIFSILMVIIC 3 | IIIFSTTSVVVFQSFAQRTPHSGF 4 | -------------------------------------------------------------------------------- /10/10.2/Q9XVK5.fasta: -------------------------------------------------------------------------------- 1 | MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDRDKYNRISREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/Q9Y3C4-3.fasta: -------------------------------------------------------------------------------- 1 | MQLTHQLDLFPECRIVDPFQILVAANKAVHLYKLGKMKTRTLSTEIIFNLSPNNNISEAL 2 | KKFGISANDTSILIVYIEEGEKQINQEYLISQVEGHQVSLKNLPEIMNITEVKKIYKLSS 3 | QEESIGTLLDAIICRMSTKDVL 4 | -------------------------------------------------------------------------------- /11/11.5_use_method_to_exec_class.py: -------------------------------------------------------------------------------- 1 | from neurons import DendrictLengths 2 | n = DendrictLengths('neuron_lengths.txt') 3 | print(n) 4 | print(n.get_average()) 5 | print(n.get_sttddev()) -------------------------------------------------------------------------------- /14/14.3_pipeline.py: -------------------------------------------------------------------------------- 1 | import os 2 | import time 3 | import sys 4 | from second import second 5 | print(sys.argv) 6 | #time.sleep(10) 7 | #filename = 'first.py' 8 | second(sys.argv[1]) -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/02-data_management/06-filtering_data/UniprotID.txt: -------------------------------------------------------------------------------- 1 | P04637 2 | P02340 3 | P10361 4 | Q29537 5 | P04637 6 | P10361 7 | P10361 8 | P02340 9 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/03-modular_programming/10-functions/nucleotideSubstitMatrix.txt: -------------------------------------------------------------------------------- 1 | A T C G 2 | A 1.0 3 | T 0.5 1.0 4 | C 0.1 0.1 1.0 5 | G 0.1 0.1 0.5 1.0 6 | -------------------------------------------------------------------------------- /10/10.2/A8QGZ7.fasta: -------------------------------------------------------------------------------- 1 | MSFKFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLMCPLRPVERFRDLRPDEVADLFQ 2 | VTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHILPRKSGDFRRNDNIYDELQKH 3 | DREEEDSPAFWRSEEEMAAEAEVLRAYFQA 4 | -------------------------------------------------------------------------------- /10/10.2/O14684.fasta: -------------------------------------------------------------------------------- 1 | MEGCVSNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLL 2 | QLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHE 3 | IAVMLLEGGANPDAKDHYEATAMHRAAAKDT 4 | -------------------------------------------------------------------------------- /10/10.2/O89106.fasta: -------------------------------------------------------------------------------- 1 | MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFRDMSPEEVADLFQ 2 | AAQRVGTVVEKHFQGTSLTFSMQDGPEAGQTVKHVHVHILPRKAGDFHRNDSIYDALEKH 3 | DREDKDSPALWRSEEEMAAEAAALRVYFQ 4 | -------------------------------------------------------------------------------- /10/10.2/P04486.fasta: -------------------------------------------------------------------------------- 1 | MFKNPAERPRKLHELSSALEIPYDELRLNCVYCKGQLTETEVLDFAFTDLTIVYRDDTPH 2 | GVCTKCLRFYSKVSEFRWYRYSVYGTTLEKLTNKGICDLLIRCITCQRPLCPEEKQRHLD 3 | KKKRFHNIGGRWTGRCIACWRRPRTETQV 4 | -------------------------------------------------------------------------------- /10/10.2/P0CG49.fasta: -------------------------------------------------------------------------------- 1 | MTASKRVAKELDDLSKELPPYLRHLSSDDANVLVWHMLLLPDQLPYRLKAFGLRIDFPRE 2 | YPLKPPTLRFTTKIYHPNISEDGLVCLPLISTENWKPYTKAYQVLEALNILVSRPNLEEP 3 | VRLELADLLTQDPEMFRKKAEEFTLQYGVDRPS 4 | -------------------------------------------------------------------------------- /10/10.2/P0CG50.fasta: -------------------------------------------------------------------------------- 1 | MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 2 | EEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNS 3 | PANSTAAQLYKENRREYEKRVKACVEQSFID 4 | -------------------------------------------------------------------------------- /10/10.2/P0CG62.fasta: -------------------------------------------------------------------------------- 1 | MLSNRKCLSKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPT 2 | DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDP 3 | LVPEIARIYKTDRDKYNRISREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P49789.fasta: -------------------------------------------------------------------------------- 1 | MTTTYFGPWLIRQSEIFFTTELSFALVNLKPVLPGHVLVCPKRIVPRVKDLTKEEFTDLW 2 | LSAQRISSVVEEHFNGDGITFAIQDGKNAGQTVEHVHIHIIPRKKFDFENNDQIYNEIEK 3 | EREPRSYEEMEKESSELRPLFEENKNKTF 4 | -------------------------------------------------------------------------------- /10/10.2/P61077-2.fasta: -------------------------------------------------------------------------------- 1 | MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDRDKYNRISREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P61077-3.fasta: -------------------------------------------------------------------------------- 1 | MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDRDKYNRLAREWTEKYAML 4 | -------------------------------------------------------------------------------- /10/10.2/P61086-3.fasta: -------------------------------------------------------------------------------- 1 | MANIAVQRIKREFKEVLKSEEVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLL 2 | SLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCA 3 | MGFDRNAVIVALSSKSWDVETATELLLSN 4 | -------------------------------------------------------------------------------- /10/10.2/P62837-2.fasta: -------------------------------------------------------------------------------- 1 | MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 2 | PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 3 | PEIARIYKTDREKYNRIAREWTQKYAM 4 | -------------------------------------------------------------------------------- /10/10.2/P70289.fasta: -------------------------------------------------------------------------------- 1 | MPAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCR 2 | SDPDVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGK 3 | LRAPIRSVTYTLAQLPCASMALQILWEAARHL 4 | -------------------------------------------------------------------------------- /10/10.2/Q05534.fasta: -------------------------------------------------------------------------------- 1 | MKSPDEVLREGELEKRSDSLFQLWKKKRGVLTSDRLSLFPASPRARPKELRFHSILKVDC 2 | VERTGKYVYFTIVTTDHKEIDFRCAGESCWNAAIALALIDFQNRRALQDFRSRQERTAPA 3 | APAEDAVAAAAAAPSEPSEPSRPSPQPKPRTP 4 | -------------------------------------------------------------------------------- /10/10.2/Q19360.fasta: -------------------------------------------------------------------------------- 1 | MMASKRVAKELESLSKELPPYLRQLSSDDANVLVWHMLLLPDQLPYGLKAFQVRIDFPRE 2 | YPFKPPTLRFTTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEP 3 | VRLELADLLTQNPEMFRKKAEEFTLKFGVDRPS 4 | -------------------------------------------------------------------------------- /10/10.2/Q6AZ61.fasta: -------------------------------------------------------------------------------- 1 | MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 2 | YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG 3 | SLCLLGQECSGTIVALRSFDLLGSCNPPSSAS 4 | -------------------------------------------------------------------------------- /10/10.2/Q96E14-2.fasta: -------------------------------------------------------------------------------- 1 | MAAAADSFSGGPAGVRLPRSPPLKVLAEQLRRDAEGGPGAWRLSRAAAGRGPLDLAAVWM 2 | QGRVVMADRGEARLRDPSGDFSVRGLERVPRGRPCLVPGKYVMVMGVVQACSPEPCLQAV 3 | KMTDLSDNPIHESMWELEVEDLHRNIP 4 | -------------------------------------------------------------------------------- /10/10.2/Q9BX63.fasta: -------------------------------------------------------------------------------- 1 | MSFRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFRDLHPDEVADLFQ 2 | VTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHVLPRKAGDFPRNDNIYDELQKH 3 | DREEEDSPAFWRSEKEMAAEAEALRVYFQA 4 | -------------------------------------------------------------------------------- /10/10.2/Q9QZU9.fasta: -------------------------------------------------------------------------------- 1 | MTASKRVAKELEDLQKELPKYLRNLCSEEDNVLVWHALLLPERPPYNLKAFRLCISFPRE 2 | YPFQPPTVKFTTRIYHPNVDRDGRVCLPIISKKNWKASTRTCQVLEALNMLVNQPEPGQP 3 | VRLELAEQLTQDPELFDQMAQEFTLQFGVDRPS 4 | -------------------------------------------------------------------------------- /10/10.2/Q9R0B7.fasta: -------------------------------------------------------------------------------- 1 | MKSSDIDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRL 2 | RSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRR 3 | NYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 4 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/02-data_management/03-data_columns/neuron_data.txt: -------------------------------------------------------------------------------- 1 | 16.38 2 | 139.90 3 | 441.46 4 | 29.03 5 | 40.93 6 | 202.07 7 | 142.30 8 | 346.00 9 | 300.00 -------------------------------------------------------------------------------- /10/10.2/O13161.fasta: -------------------------------------------------------------------------------- 1 | MARFEDPTRRPYKLPDLCTELNTSLQDIEITCVYCKTVLELTEVFEFAFKDLFVVYRDSI 2 | PHAACHKCIDFYSRIRELRHYSDSVYGDTLEKLTNTGLYNLLIRCLRCQKPLNPAEKLRH 3 | LNEKRRFHNIAGHYRGQCHSCCNRARQERLQRRRETQV 4 | -------------------------------------------------------------------------------- /10/10.2/O14933-2.fasta: -------------------------------------------------------------------------------- 1 | MMASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPE 2 | YPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREP 3 | LRMDLADLLTQNPELFRKNAEEFTLRFGVDRPS 4 | -------------------------------------------------------------------------------- /10/10.2/O54836.fasta: -------------------------------------------------------------------------------- 1 | MVEKKTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDD 2 | DADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSVAEGPNYLTACAGPPSRPQRPFCAVC 3 | GFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 4 | -------------------------------------------------------------------------------- /10/10.2/O75928.fasta: -------------------------------------------------------------------------------- 1 | MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG 2 | RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI 3 | YGSRFPDENFTLKHVGPGWMASMLCSVTSKRAWTS 4 | -------------------------------------------------------------------------------- /10/10.2/O95388-5.fasta: -------------------------------------------------------------------------------- 1 | MRWFLPWTLAAVTAAAASTVLATALSPAPTTMDFTPAPLEDTSSRPQFCKWPCECPPSPP 2 | RCPLGVSLITDGCECCKMCAQQLGDNCTEAAICDPHRGLYCDYSGDRPRYAIGVCARREE 3 | VSGCVPARGIHELHTCGLHQHTLLSTQVLWSLHGQ 4 | -------------------------------------------------------------------------------- /10/10.2/P03243-3.fasta: -------------------------------------------------------------------------------- 1 | MERRNPSERGVPAGFSGHASVESGCETQESPATVVFRPPGDNTDGGAAAAAGGSQAAAAG 2 | AEPMEPESRPGPSGMNVVQPESMSKVNLNGVFDMTMKIWKVLRYDETRTRCRPCECGGKH 3 | IRNQPVMLDVTEELRPDHLVLACTRAEFGSSDEDTD 4 | -------------------------------------------------------------------------------- /10/10.2/P10160.fasta: -------------------------------------------------------------------------------- 1 | MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG 2 | IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG 3 | KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK 4 | -------------------------------------------------------------------------------- /10/10.2/P15822.fasta: -------------------------------------------------------------------------------- 1 | MVEKKPAVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDD 2 | DADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSASEGPNYLTACAGPPSRPQRPFCAVC 3 | GFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 4 | -------------------------------------------------------------------------------- /10/10.2/P15927.fasta: -------------------------------------------------------------------------------- 1 | MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAVSAAALVSGGVAQAAGSGG 2 | LGGPVRPVLVAPAVSGSGGGAVSTGLSRHSCAARPSAGVGGSSSSLGSGSRKRPLLAPLC 3 | NGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCE 4 | -------------------------------------------------------------------------------- /10/10.2/P21675.fasta: -------------------------------------------------------------------------------- 1 | MSELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRR 2 | LRVLEAETQILTDWQDKKGDRRFLKLGRDHELGAPPKHGKPKKQKLEGKTGHGPGPGPGR 3 | PKSKNVQPKIQEYEFTDDPIDVPRIPKNDAPNRFWA 4 | -------------------------------------------------------------------------------- /10/10.2/P24051.fasta: -------------------------------------------------------------------------------- 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 2 | IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE 3 | CPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK 4 | -------------------------------------------------------------------------------- /10/10.2/P25153.fasta: -------------------------------------------------------------------------------- 1 | MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 2 | RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 3 | NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 4 | -------------------------------------------------------------------------------- /10/10.2/P62953.fasta: -------------------------------------------------------------------------------- 1 | MSHGKRTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSRALQDALTDHYKHHWFPEKPS 2 | KGSGYRCIRINHKMDPIISKVASQIGLSQPQLHRLLPSELTLWVDPYEVSYRIGEDGSIC 3 | VLYEEAPVAASYGLLTCKNQMMLGRSSPSKNYVMAVSS 4 | -------------------------------------------------------------------------------- /10/10.2/P63241-2.fasta: -------------------------------------------------------------------------------- 1 | MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG 2 | IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG 3 | KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK 4 | -------------------------------------------------------------------------------- /10/10.2/P63280.fasta: -------------------------------------------------------------------------------- 1 | MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 2 | RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITINQLFIGIQELL 3 | NEPNIQEPAQAEAYTIYCQNRVEYEKRFRAQAKKFCPS 4 | -------------------------------------------------------------------------------- /10/10.2/P63281.fasta: -------------------------------------------------------------------------------- 1 | MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 2 | RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 3 | NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 4 | -------------------------------------------------------------------------------- /10/10.2/P68036-2.fasta: -------------------------------------------------------------------------------- 1 | MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAE 2 | YPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHP 3 | LRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD 4 | -------------------------------------------------------------------------------- /10/10.2/P97287.fasta: -------------------------------------------------------------------------------- 1 | MTYSKIGDEPPKVFQASTQTRRAPGGIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKS 2 | KNKKTGDEEVNQEFINMNESDAHAFDEEWQSEVLKYKPGRHNLENTRMRSVGHENPGSRE 3 | LKRREKPQQSPAIEHGRRSDVLGDKLHIKGSSVKSNKK 4 | -------------------------------------------------------------------------------- /10/10.2/Q05086.fasta: -------------------------------------------------------------------------------- 1 | MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEI 2 | KIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAA 3 | EPDDPQDAVVANQNAVIVALSSKSWDVETATELLLSN 4 | -------------------------------------------------------------------------------- /10/10.2/Q16514.fasta: -------------------------------------------------------------------------------- 1 | MDDAHESPSDKGGETGESDETAAVPGDPGATDTDGIPEETDGDADVDLKEAAAEEGELES 2 | QDVSDLTTVEREDSSLLNPAAKKLKIDTKEKKEKKQKVDEDEIQKMQILVSSFSEEQLNR 3 | YEMYRRSAFPKAAIKRHWMCVRSGEKCHHYNPNI 4 | -------------------------------------------------------------------------------- /10/10.2/Q23457.fasta: -------------------------------------------------------------------------------- 1 | MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDD 2 | NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAVCKNTITLFLHNCFYLYNV 3 | SVTVEKSQKHKHKKKKAKKNKDKEKEKDDQKVRSVTV 4 | -------------------------------------------------------------------------------- /10/10.2/Q28EG9.fasta: -------------------------------------------------------------------------------- 1 | MVEKKTSVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDD 2 | DADTGKKKKKTRGDHFKLRFRKNFQALLEEQNLSVAEGPNYLTACAGPPSRPQRPFCAVC 3 | GFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 4 | -------------------------------------------------------------------------------- /10/10.2/Q54NU5.fasta: -------------------------------------------------------------------------------- 1 | MSHGKRTDMLPEIAAAVGFLTSLLRTRGCVSEQRLKVFSRALQDALTDHYKHHWFPEKPS 2 | KGSGYRCIRINHKMDPIISKVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC 3 | VLYEEAPVATSYGLLTCKNQMMLGRSSPSKNYVMTVSS 4 | -------------------------------------------------------------------------------- /10/10.2/Q5BKP2.fasta: -------------------------------------------------------------------------------- 1 | MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 2 | RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 3 | NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 4 | -------------------------------------------------------------------------------- /10/10.2/Q5ZJN4.fasta: -------------------------------------------------------------------------------- 1 | MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 2 | RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 3 | NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 4 | -------------------------------------------------------------------------------- /10/10.2/Q62151-7.fasta: -------------------------------------------------------------------------------- 1 | MPAGTAARAWVLVLALWGAVAGGQNITARIGEPLVLSCKGAPKKPPQQLEWKLNTGRTEA 2 | WKVLSPQGGPWDSVARILPNGSLLLPATGIVDEGTFRCRATNRRGKEVKSNYRVRVYQIP 3 | GKPEIVDPASELTASVPNKVGTCVSEGSYPAGG 4 | -------------------------------------------------------------------------------- /10/10.2/Q641Y5.fasta: -------------------------------------------------------------------------------- 1 | MIRRVRVTVRVSRACRPHHVRIFVAKIVQALCRASASINQGTPFQVLLIVRKKRHRGRSG 2 | HDDGQCTPGSNPVAVRGGTQHPRPDNPHPASPRRCPGGLPGHSDAAPSGRGAAGCQGLLG 3 | SPACGPRRGTRTPPRGRIPARGGEGRLNDTVQEAQ 4 | -------------------------------------------------------------------------------- /10/10.2/Q6P1Q0-4.fasta: -------------------------------------------------------------------------------- 1 | MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRSSKLHLSPKADVKNLMSYV 2 | VTKTKAINGKYHRFLGRHFPRFYVLYTIFMKESLEPGHASHILPASSLVETSFEDSYNCD 3 | SPTGQGFGKAGDWPADCSGSKIGLLSPWPEFYAYW 4 | -------------------------------------------------------------------------------- /10/10.2/Q6ZWY3.fasta: -------------------------------------------------------------------------------- 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 2 | IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE 3 | CPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK 4 | -------------------------------------------------------------------------------- /10/10.2/Q70UQ0.fasta: -------------------------------------------------------------------------------- 1 | MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG 2 | IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG 3 | KEIEQKYDSGEEILITVLSAMTEEAAVAIKAMAK 4 | -------------------------------------------------------------------------------- /10/10.2/Q71UM5.fasta: -------------------------------------------------------------------------------- 1 | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 2 | IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE 3 | CPSEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK 4 | -------------------------------------------------------------------------------- /10/10.2/Q7TSU0.fasta: -------------------------------------------------------------------------------- 1 | MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS 2 | KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC 3 | VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS 4 | -------------------------------------------------------------------------------- /10/10.2/Q7Z419.fasta: -------------------------------------------------------------------------------- 1 | MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKY 2 | PRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDID 3 | VAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 4 | -------------------------------------------------------------------------------- /10/10.2/Q8NEA9.fasta: -------------------------------------------------------------------------------- 1 | MLLFALLLAMELPLVAASATMRAQWTYSLRCHDCAVINDFNCPNIRVCPYHIRRCMTISI 2 | RINSRELLVYKNCTNNCTFVYAAEQPPEAPGKIFKTNSFYWVCCCNSMVCNAGGPTNLER 3 | DMLPDEVTEEELPEGTVRLGVSKLLLSFASIIVSNILP 4 | -------------------------------------------------------------------------------- /10/10.2/Q8TDI0.fasta: -------------------------------------------------------------------------------- 1 | MLRLPTVFRQMRPVSRVLAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR 2 | TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA 3 | RSIAKEGFEKISKGANPVEIRRGRNVCCHHSVLNFSVL 4 | -------------------------------------------------------------------------------- /10/10.2/Q92466-4.fasta: -------------------------------------------------------------------------------- 1 | MAPKKRPETQKTSEIVLRPRNKRSRSPLELEPEAKKLCAKGSGPSRRCDSDCLWVGLAGP 2 | QILPPCRSIVRTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWH 3 | PTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGHLVL 4 | -------------------------------------------------------------------------------- /10/10.2/Q96FX8.fasta: -------------------------------------------------------------------------------- 1 | MKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYS 2 | QTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS 3 | LYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEKAKL 4 | -------------------------------------------------------------------------------- /10/10.2/Q9R002.fasta: -------------------------------------------------------------------------------- 1 | MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG 2 | IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG 3 | KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK 4 | -------------------------------------------------------------------------------- /10/10.2/Q9XVN3.fasta: -------------------------------------------------------------------------------- 1 | MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG 2 | IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG 3 | KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK 4 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/pubmed.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/zd200572/Managing_Your_Biological_Data_with_Python/HEAD/krother-python-for-biologists-e47cf55735c7/pubmed.txt -------------------------------------------------------------------------------- /10/10.2/A0A158HYG7.fasta: -------------------------------------------------------------------------------- 1 | MGAFAHFPGTVDHILSEYTRVTSEGGRLSDVLSGYIDPDDGIAPPAEVPPPVDPKAAKAE 2 | GADDDEEESADASDEEDEVESGPDPVIAQQRFGAVSDQMEITRKALKKFGRDDKHAIAEM 3 | VALAELFMPIKLVPKQFEGLVERVRGALERLRAQERA 4 | -------------------------------------------------------------------------------- /10/10.2/B5DE69.fasta: -------------------------------------------------------------------------------- 1 | MSNPGDVRPVPHRSKVCRCLFGPVDSEQLRRDCDALMAGCLQEARERWNFDFVTETPLEG 2 | NFVWERVRSLGLPKVYLSPGSRSRDDLGGDKRPSTSSALLQGPAPEDHVALSLSCTLVSE 3 | RPEDSPGGPGTSQGRKRRQTSLTDFYHSKRRLVFCKRKP 4 | -------------------------------------------------------------------------------- /10/10.2/P15941-13.fasta: -------------------------------------------------------------------------------- 1 | MTPGTQSPFFLLLLLTVLTATTAPKPATVVTGSGHASSTPGGEKETSATQRSSVPSSTEK 2 | NAFNSSLEDPSTDYYQELQRDISEMAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHG 3 | RYVPPSSTDRSPYEKVSAGNGGSSLSYTNPAVAATSANL 4 | -------------------------------------------------------------------------------- /10/10.2/P51532.fasta: -------------------------------------------------------------------------------- 1 | MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 2 | WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 3 | KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVGSTQFCL 4 | -------------------------------------------------------------------------------- /10/10.2/P97377.fasta: -------------------------------------------------------------------------------- 1 | MRMEKIVLEKVCWKVKATTAFQFLQLYYSLLQENLPLERRNSINFERLEAQLKACHCRII 2 | FSKAKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKINGRDLTFWQELVSKCLTEYSS 3 | NKCSKPNVQKLKWIVSGRTARQLKHSYYRITHLPTIPEMVP 4 | -------------------------------------------------------------------------------- /10/10.2/Q01664.fasta: -------------------------------------------------------------------------------- 1 | MQPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCID 2 | PNDSKHKRTDRSILCCLRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNF 3 | DRFSEMMDHMGGDEDVDLPEVDGADDDSQDSDDEKMPDLE 4 | -------------------------------------------------------------------------------- /10/10.2/Q01851.fasta: -------------------------------------------------------------------------------- 1 | MAPIKVGDAIPSVEVFEGEPGKKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQA 2 | GALKAKGAQVVACLSVNDVFVIEEWGRAHQAEGKVRLLADPTGAFGKATDLLLDDSLVSL 3 | FGNRRLKRFSMVIDNGIVKALNVEPDGTGLTCSLAPNILSQL 4 | -------------------------------------------------------------------------------- /10/10.2/Q09FC8.fasta: -------------------------------------------------------------------------------- 1 | MVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKPPLKTTAAPLSSLKAPRVD 2 | TAPVVASPYQRRDSDRYCGLCAAWFNNPLMAQQHYEGKKHKKNAARVALLEQLGTSLDLG 3 | ELRGLRRTYRCTTCSVSLNSIEQYHAHLQGSKHQTNLKNK 4 | -------------------------------------------------------------------------------- /10/10.2/Q16514-2.fasta: -------------------------------------------------------------------------------- 1 | MNQFGPSALINLSNFSSIKPEPASTPPQGSMANSTAVVKIPGTPGAGGRLSPENNQVLTK 2 | KKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHL 3 | ERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK 4 | -------------------------------------------------------------------------------- /10/10.2/Q1HVF7.fasta: -------------------------------------------------------------------------------- 1 | MELETVLQSFQSVRQLLQYTSKNTSGFWRYLFGSTLSKVVNRVKEDYREEFENILADCPG 2 | LLASLDLCYHLVFQEKVVRSLDFSSVGRTVASIAFLATILDKWSEKSHLSWDYMLDYMSM 3 | QLWRAWLKRRVCIYSLARPLTMPPLPTLQEEKEEERNPAVVEK 4 | -------------------------------------------------------------------------------- /10/10.2/Q6F3J0.fasta: -------------------------------------------------------------------------------- 1 | MASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFY 2 | REHEAGQSEPTSLPTRMPSSSGGRSWDPPECSEHAMWPQILSVGVSASLTPATPPMVRTL 3 | WFQPAERLQPSSLTSVNSAGMRRKSPSCAVALCAIAQREVSTM 4 | -------------------------------------------------------------------------------- /10/10.2/Q86YD1.fasta: -------------------------------------------------------------------------------- 1 | MKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASPPTPIRSVLAPQPSTSNS 2 | QRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPST 3 | AGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPGPTR 4 | -------------------------------------------------------------------------------- /10/10.2/Q8N726.fasta: -------------------------------------------------------------------------------- 1 | MGRRFVVTVRIRRTGRSPQVRVFLVQFLGSSRPRSANGTRGFVALVLRPERIARRGPQPH 2 | PGPGDDDGQRQSGSSPALLWCRFELRGPHHPLPTGARRSAGGLPRHSGSTAPGRGAAGCA 3 | RCLGSPAARPGPRAGTSRRRAVFAVSTLLRWERFPGHRQA 4 | -------------------------------------------------------------------------------- /10/10.2/Q8R409.fasta: -------------------------------------------------------------------------------- 1 | MHRRRSRSCREDQKPVMDDQRDLISNNEQLPMLGRRPGAPESKCSRGALYTGFSILVTLL 2 | LAGQATTAYFLYQQQGRLDKLTVTSQNLQLENLRMKLPKPPKPVSKMRMATPLLMQALPM 3 | GALPQGPMQNATKYGNMTEDHVMHLLQSHWNWRTRLLGWV 4 | -------------------------------------------------------------------------------- /10/10.2/Q8TCV5.fasta: -------------------------------------------------------------------------------- 1 | MAPRRKEKYKLPVPLPEGKILDDMEGNRWALGKMIGSGGFGLIYLAFPTNKPNKDARHVI 2 | KLEYQENGPLFSELKFYQRAAKRECIQKWIQQRKLDYLGIPVFYGFGLTDFKGRSYRFMV 3 | MERLGIDLQKLLDQNGGFKKLTVLQLGIRMVSLRDLTGDLLDI 4 | -------------------------------------------------------------------------------- /10/10.2/Q8WXC6.fasta: -------------------------------------------------------------------------------- 1 | MNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEAL 2 | RDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVA 3 | GALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN 4 | -------------------------------------------------------------------------------- /10/10.2/Q91WL8-3.fasta: -------------------------------------------------------------------------------- 1 | MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLP 2 | YGWEQETDENGQVFFVDHINKRTTYLDPRLAFTVDDNPTKPTTRQRYDGSTTAMEILQGR 3 | DFTGKVVLVTGANSGIALSPLLGERCIRRRQVLCSVFG 4 | -------------------------------------------------------------------------------- /10/10.2/Q99732-2.fasta: -------------------------------------------------------------------------------- 1 | MSVPGPYQAATGPSSAPSAPPSYEETVAVNSYYPTPPAPMPGPTTGLVTGPDGKGMNPPS 2 | YYTQPAPIPNNNPITVQTVYVQHPITFLDRPIQMCCPSCNKMIVSQLSYNAGALTWLSCG 3 | SLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTYKRL 4 | -------------------------------------------------------------------------------- /10/10.2/Q9BRA0.fasta: -------------------------------------------------------------------------------- 1 | MASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFGGDRGAPKRGSGKD 2 | SHHPARTAHYGSLPQKSHGRTQDENPVVHFFKNIVTPRTPPPSQGKGAEGQRPGFGYGGR 3 | ASDYKSAHKGFKGVDAQGTLSKIFKLGGRDSRSGSPMARR 4 | -------------------------------------------------------------------------------- /10/10.2/Q9H9Q2-3.fasta: -------------------------------------------------------------------------------- 1 | MKCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDI 2 | NNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATASSS 3 | AQEMEQQLAERECPPHAEQRQPTKKMSKVKGLVSSRH 4 | -------------------------------------------------------------------------------- /10/10.2/Q9UF72.fasta: -------------------------------------------------------------------------------- 1 | MFQRLNKMFVGEVTTSSSQEPEFSEKEDDEWILVDFIDTCPGFSAEEEEEDEDIGEESSA 2 | EHTSVFSCLPASLECLTDTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPME 3 | NLLIEHPSMSVYAVHNSCPGLSEASCGNDEYNSSGPRARKSCL 4 | -------------------------------------------------------------------------------- /10/10.2/Q9WV95.fasta: -------------------------------------------------------------------------------- 1 | MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 2 | LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 3 | DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 4 | -------------------------------------------------------------------------------- /Lowry.txt: -------------------------------------------------------------------------------- 1 | protein ext1 ext2 ext3 2 | 0.16 0.038 0.044 0.04 3 | 0.33 0.089 0.095 0.091 4 | 0.66 0.184 0.191 0.191 5 | 1.0 0.28 0.292 0.283 6 | 1.32 0.365 0.367 0.365 7 | 1.66 0.441 0.443 0.444 8 | -------------------------------------------------------------------------------- /10/10.2/O15151-5.fasta: -------------------------------------------------------------------------------- 1 | MTSFSTSAQCSTSDSACRISPGQINQENEGNDVPDCRRTISAPVVRPKDAYIKKENSKLF 2 | DPCNSVEFLDLAHSSESQETISSMGEQLDNLSEQRTDTENMEDCQNLLKPCSLCEKRPRD 3 | GNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA 4 | -------------------------------------------------------------------------------- /10/10.2/O15392-3.fasta: -------------------------------------------------------------------------------- 1 | MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 2 | FKELEGWEPDDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELT 3 | LGEFLKLDRERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD 4 | -------------------------------------------------------------------------------- /10/10.2/O96017-4.fasta: -------------------------------------------------------------------------------- 1 | MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 2 | SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLDEDMKRKFQDLLSE 3 | ENESTALPQVLAQPSTSRKRPREGEAEGAETTKRPAVCAAVL 4 | -------------------------------------------------------------------------------- /10/10.2/O96017-7.fasta: -------------------------------------------------------------------------------- 1 | MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 2 | SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKS 3 | CEYCFDEPLLKRTDKYRTYSKKHFRIFREENLSCPYRIWFNFCLF 4 | -------------------------------------------------------------------------------- /10/10.2/P24522-2.fasta: -------------------------------------------------------------------------------- 1 | MTLEEFSAGEQKTERMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 2 | ADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPP 3 | DLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVINLPER 4 | -------------------------------------------------------------------------------- /10/10.2/P30044-3.fasta: -------------------------------------------------------------------------------- 1 | MAPIKVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQA 2 | EALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSI 3 | FGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 4 | -------------------------------------------------------------------------------- /10/10.2/P36624.fasta: -------------------------------------------------------------------------------- 1 | MELWSELQSYQNLRRLLELASARTSSCWRILFGSTLTNVIYRAKEEYSSRFADLLSHNPG 2 | IFASLNLGHHSFFQEIVIRNLDFSSPGRTVSGLAFICFILDQWSAQTHLSQGYTLDYMAM 3 | ALWRTLLRRKRVLGCLPAQRPHGLDPVQEEEEEEENLRAGLDPSTEL 4 | -------------------------------------------------------------------------------- /10/10.2/P38936.fasta: -------------------------------------------------------------------------------- 1 | MSEPSRDAHQIPHGSKACRRLFGPVDSEQLRRDCDALMAGCVQEARERWNFDFVTETPLE 2 | GDFAWERVWGLGLPKLYLPAGPRGGRDDLGGGKRPSTSSTLLPGTAREDHLDLSLSCTLM 3 | PHSPERPEASPGAPGTSQGRKRRQTSMTDFYHSKRRLIFSKRKP 4 | -------------------------------------------------------------------------------- /10/10.2/P51480.fasta: -------------------------------------------------------------------------------- 1 | MSEPAGDVRQNPCGSKACRRLFGPVDSEQLSRDCDALMAGCIQEARERWNFDFVTETPLE 2 | GDFAWERVRGLGLPKLYLPTGPRRGRDELGGGRRPGTSPALLQGTAEEDHVDLSLSCTLV 3 | PRSGEQAEGSPGGPGDSQGRKRRQTSMTDFYHSKRRLIFSKRKP 4 | -------------------------------------------------------------------------------- /10/10.2/P63208-2.fasta: -------------------------------------------------------------------------------- 1 | MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 2 | WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 3 | KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 4 | -------------------------------------------------------------------------------- /10/10.2/Q03347-4.fasta: -------------------------------------------------------------------------------- 1 | MRIPVDASTSRRFTPPSTALSPGKMSEALPLGAPDGGPALASKLRSGDRSMVEVLADHPG 2 | ELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVLLPEEGGGRSRWRSADGQSEPRGQRLRRL 3 | LKGAACSRSLWSFSLSLGWGGDAALPWRPSGGSASEVSKREFF 4 | -------------------------------------------------------------------------------- /10/10.2/Q07812-6.fasta: -------------------------------------------------------------------------------- 1 | MDGSGEQPRGGGPTSSEQIMKTGALLLQGFIQDRAGRMGGEAPELALDPVPQDASTKKLS 2 | ECLKRIGDELDSNMELQRMIAAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKL 3 | VLKAGVKWRDLGSLQPLPPGFKRFTCLSIPRSWDYRPCAPRCRN 4 | -------------------------------------------------------------------------------- /10/10.2/Q5R5V0.fasta: -------------------------------------------------------------------------------- 1 | MFQRLNKMFVGEVSSSSNQEPEFNEKEDDEWILVDFIDTCTGFSAEEEEEEEDISEESPT 2 | EHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPME 3 | NLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPRARKSCL 4 | -------------------------------------------------------------------------------- /10/10.2/Q7TQC5.fasta: -------------------------------------------------------------------------------- 1 | MQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTAISSLKAVTREHLELLKHMHTVGEKV 2 | IVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVI 3 | EMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ 4 | -------------------------------------------------------------------------------- /10/10.2/Q8C0D7-5.fasta: -------------------------------------------------------------------------------- 1 | MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 2 | KLALLRQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 3 | YDSSSSKGKKSRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRT 4 | -------------------------------------------------------------------------------- /10/10.2/Q8CHK4.fasta: -------------------------------------------------------------------------------- 1 | MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 2 | KLALLRQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 3 | YDSSSSKGRTQKEKKAARARSKGKNSDEEAPKAAQKKLKLVRTSPMER 4 | -------------------------------------------------------------------------------- /10/10.2/Q8N2Z9-3.fasta: -------------------------------------------------------------------------------- 1 | MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 2 | FAKDLEMFARHAKRTTINTEDVKLLARRSNSLHMQEAAGIRKSSLLTFLAWWFEWTSQAS 3 | AGPLIGEEAREVARRQEGAPPQQSARRDRMPCRNFFWKTFSSCK 4 | -------------------------------------------------------------------------------- /10/10.2/Q8NI60-3.fasta: -------------------------------------------------------------------------------- 1 | MQTDPNWSNFFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEM 2 | KFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLVPPPE 3 | ETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNYCKRQAQQ 4 | -------------------------------------------------------------------------------- /10/10.2/Q96RU2.fasta: -------------------------------------------------------------------------------- 1 | MAPNASCLCVHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPR 2 | RSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIE 3 | TKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 4 | -------------------------------------------------------------------------------- /10/10.2/Q9JLH7.fasta: -------------------------------------------------------------------------------- 1 | MSEEKPQQSAEEPEPGEPKAKPAPEEPEPGEPKAKPAPEEPEPGEPKAKPAPEKTSDYYR 2 | ISEKLPVRFNNPGWFHGYGTKEAVSMYRTSNQTYGSRAPTVHEMPKVFYPSSNKFSRQHA 3 | AFGMFQSHNINVTLEKSLVTGPDNHITHYDRLNFHPSYNVNRPSICD 4 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/02-data_management/06-filtering_data/text.txt: -------------------------------------------------------------------------------- 1 | line1 2 | line2 3 | line3 4 | line4 5 | line5 6 | line6 7 | line7 8 | line8 9 | line9 10 | line10 11 | -------------------------------------------------------------------------------- /10/10.2/O43255.fasta: -------------------------------------------------------------------------------- 1 | MFLMRFLFSVSRFSTPAEETPEHLGSALKFRSSFDSDPMSGFGATVAIGVTIFVVFIATI 2 | IICFTCSCCCLYKMCCPQRPVVTNTTTTTVVHAPYPQPQPQPVAPSYPGPTYQGYHPMPP 3 | QPGMPAAPYPTQYPPPYLAQPTGPPPYHESLAGASQPPYNPTYMDSLKTIP 4 | -------------------------------------------------------------------------------- /10/10.2/P02686-6.fasta: -------------------------------------------------------------------------------- 1 | MASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFGGDRGAPKRGSGKD 2 | SHHPARTAHYGSLPQKSHGRTQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAE 3 | GQRPGFGYGGRASDYKSAHKGFKGVDAQGTLSKIFKLGGRDSRSGSPMARR 4 | -------------------------------------------------------------------------------- /10/10.2/P15941-10.fasta: -------------------------------------------------------------------------------- 1 | MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNALSTGVSF 2 | FFLSFHISNLQFNSSLEDPSTDYYQELQRDISEMAVCQCRRKNYGQLDIFPARDTYHPMS 3 | EYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSSLSYTNPAVAATSANL 4 | -------------------------------------------------------------------------------- /10/10.2/P15941-17.fasta: -------------------------------------------------------------------------------- 1 | MTPGTQSPFFLLLLLTVLTATTAPKPATVVTGSGHASSTPGGEKETSATQRSSVPSSTEK 2 | NASGAGVPGWGIALLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEY 3 | PTYHTHGRYVPPSSTDRSPYEKVSAGNGGSSLSYTNPAVAATSANL 4 | -------------------------------------------------------------------------------- /10/10.2/P30044-4.fasta: -------------------------------------------------------------------------------- 1 | MGLAGVCALRRSAGYILVGGAGGQSAAAAARRYSEGEWASGGVRSFSRAAAAMAPIKVGD 2 | AIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKVRLLADPTGAFGKETDLL 3 | LDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 4 | -------------------------------------------------------------------------------- /10/10.2/P43359.fasta: -------------------------------------------------------------------------------- 1 | MAVAVGVRAAPVLGLARALVLGLRGSQAARWRGWGTAAPGSLWALCECPAGCRELWFRGR 2 | AAWAARSERLLHPAQDSDGEREDSAAERARQQLEALLNKTMRIRMTDGRTLVGCFLCTDR 3 | DCNVILGSAQEFLKPSDSFSAGEPRVLGLAMVPGHHIVSIEVQRESLTGPPYL 4 | -------------------------------------------------------------------------------- /10/10.2/P51480-2.fasta: -------------------------------------------------------------------------------- 1 | MESAADRLARAAAQGRVHDVRALLEAGVSPNAPNSFGRTPIQVMMMGNVHVAALLLNYGA 2 | DSNCEDPTTFSRPVHDAAREGFLDTLVVLHGSGARLDVRDAWGRLPLDLAQERGHQDIVR 3 | YLRSAGCSLCSAGWSLCTAGNVAQTDGHSFSSSTPRALELRGQSQEQS 4 | -------------------------------------------------------------------------------- /10/10.2/P51509.fasta: -------------------------------------------------------------------------------- 1 | MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 2 | QEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL 3 | AARTVESRQAQDLARSYGIPYIETSAKTRQGSRSGSSSSSGTLWDPPGPM 4 | -------------------------------------------------------------------------------- /10/10.2/P53563-3.fasta: -------------------------------------------------------------------------------- 1 | MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLA 2 | DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 3 | QSFEQDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK 4 | -------------------------------------------------------------------------------- /10/10.2/P54619.fasta: -------------------------------------------------------------------------------- 1 | MSQPCRKLWRHNYETSSCIEFLKSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAG 2 | DDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTA 3 | FDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGEN 4 | -------------------------------------------------------------------------------- /10/10.2/P78543.fasta: -------------------------------------------------------------------------------- 1 | MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK 2 | PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS 3 | ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG 4 | -------------------------------------------------------------------------------- /10/10.2/Q07817-3.fasta: -------------------------------------------------------------------------------- 1 | MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA 2 | DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 3 | QSFEQDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK 4 | -------------------------------------------------------------------------------- /10/10.2/Q14209.fasta: -------------------------------------------------------------------------------- 1 | MEFWSELQSYQSLRRLLELASARTSSCWRFIFGSTLTNVIYRAKEDYSSRFAELLSFNPG 2 | IFASLNLGHHSFFQEIVIKNLDFSSPGRTVSGLAFICFILDQWSAQTHLSEGYTLDYMTM 3 | ALWRTLLRRKRVLGCSPAQPPHGLDPVREEEEEEEEEENLRAGLDPQTEL 4 | -------------------------------------------------------------------------------- /10/10.2/Q4G1C9-5.fasta: -------------------------------------------------------------------------------- 1 | MEAARPFAREWRAQSLPLAVGGVLKLRLCELWLLLLGSSLNARFLPDEEDVDFINEYVNL 2 | HNELRGDVIPRGSNLRFMTWDVALSRTARAWGKKCLFTHNIYLQDVQMVHPKFYGIGENM 3 | WVGPENEFTASIAIRSWHAEKKMYNFENGSCSGDCSNYIQRNTDEKTL 4 | -------------------------------------------------------------------------------- /10/10.2/Q64364-2.fasta: -------------------------------------------------------------------------------- 1 | MGRRFLVTVRIQRAGRPLQERVFLVKFVRSRRPRTASCALAFVNMLLRLERILRRGPHRN 2 | PGPGDDDGQRSRSSSSAQLRCRFELRGPHYLLPPGARRSAGRLPGHAGGAARVRGSAGCA 3 | RCLGSPAARLGPRAGTSRHRAIFAFRWVLFVFRWVVFVYRWERRPDRRA 4 | -------------------------------------------------------------------------------- /10/10.2/Q64373-3.fasta: -------------------------------------------------------------------------------- 1 | MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 2 | DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 3 | QSFEQDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK 4 | -------------------------------------------------------------------------------- /10/10.2/Q7Z2E3-3.fasta: -------------------------------------------------------------------------------- 1 | MQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKV 2 | IVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVI 3 | EMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWTQ 4 | -------------------------------------------------------------------------------- /10/10.2/Q8WXE1.fasta: -------------------------------------------------------------------------------- 1 | MEVLRRSSVFAAEIMDAFDRSPTDKELVAQAKALGREYVHARLLRAGLSWSAPERASPAP 2 | GGRLAEVCTVLLRLGITWGKVVSLYSVAAGLAVDCVRQAQPAMVHALVDCLGEFVRKTLA 3 | TWLRRRGGWTDVLKCVVSTDPGFRSHWLVATLCSFGRFLKAAFFLLLPER 4 | -------------------------------------------------------------------------------- /10/10.2/Q96676.fasta: -------------------------------------------------------------------------------- 1 | MKYTIVPAPRNLHDYVLELLEEWHPDCLDCEYPNGSPSPPTLHDLFDVELETSHPFVGLC 2 | DSCAEADTDSSASTEGDSGFSPLSTPPVSPIPPHPTSPASISDDMLLCLEEMPTFDDEDE 3 | VRSAATTFERWENTFDPHVGPIFGCLRCAFYQEQDDNALCGLCYPKGPCRR 4 | -------------------------------------------------------------------------------- /10/10.2/Q9H305-3.fasta: -------------------------------------------------------------------------------- 1 | MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHP 2 | MPQPGFIPPHMSADGTYMPPGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGL 3 | MNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKRLC 4 | -------------------------------------------------------------------------------- /10/10.2/Q9ULC4-3.fasta: -------------------------------------------------------------------------------- 1 | MENYSFLDKEKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFR 2 | QREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIV 3 | AIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTYK 4 | -------------------------------------------------------------------------------- /10/10.2/Q9Z1R2.fasta: -------------------------------------------------------------------------------- 1 | MEVAEPSSPTEEEEEEEEHSAEPRPRTRSNPEGAEDRAVGAQASVGSRSEGEGEAASADD 2 | GSLNTSGAGPKSWQVPPPAPEVQIRTPRVNCPEKVIICLDLSEEMSLPKLESFNGQQKTE 3 | LPVTENVQTIPPPYVVRTILVYSRPPCQPQFSLTEPMKVGEAWEREGCLQP 4 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/02-data_management/06-filtering_data/list_new.txt: -------------------------------------------------------------------------------- 1 | a 2 | b 3 | d 4 | e 5 | f 6 | g 7 | h 8 | i 9 | l 10 | m 11 | n 12 | o 13 | p 14 | q 15 | r 16 | s 17 | -------------------------------------------------------------------------------- /.idea/vcs.xml: -------------------------------------------------------------------------------- 1 | 2 | 3 | 4 | 5 | 6 | -------------------------------------------------------------------------------- /10/10.2/A0A0A1E6W6.fasta: -------------------------------------------------------------------------------- 1 | GPDVIDVRGLTATGRFTFDPGFMSTASCDSKITYIDGDNGILLHRGYPIEQLAEQSDYLE 2 | TCYLLLNGELPTAEQKAQFVAVVKNHTMVHEQLKTFFNGFRRDAHPMAVMCGVVGALSAF 3 | YHDSLDINNPQHREISAVRLVAKMPTLAAMVYKYSMGQPMMYPRNDLSYAE 4 | -------------------------------------------------------------------------------- /10/10.2/A2RV29.fasta: -------------------------------------------------------------------------------- 1 | MEGQRGAPRRSRGRPVSRGGAGHKAKRVTGGRGGRQGPSPAFHCALCQLQVNSETQLKQH 2 | MSSRRHKDRLAGKTPKPSSQHSKLQKHAALAVSILKSKLALQKQLTKTLAARFLPSPLPT 3 | AATAICALPGPLALRPAPTAATTLFPAPILGPALFRTPAGAVRPATGPIVLAPY 4 | -------------------------------------------------------------------------------- /10/10.2/O43324-2.fasta: -------------------------------------------------------------------------------- 1 | MAAAAELSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLTTIAAHLVKQANKEYL 2 | LGSTAEEKAIVQQWLEYRVTQVDGHSSKNDIHTLLKDLNSYLEDKVYLTGYNFTLADILL 3 | YYGLHRFIVDLTVQEKEKYLNVSRWFCHIQHYPGIRQHLSSVVFIKNRLYTNSH 4 | -------------------------------------------------------------------------------- /10/10.2/O54926-2.fasta: -------------------------------------------------------------------------------- 1 | MPKRSCPFADAAPLQLKVHVGLKELSHGVFAERYSREVFERTKQLLFQGARAYRDHISSE 2 | DCSVNHLQESLKSGVVGAPQPARGQMLIGPDGRLTRCQAQASEGGLPRTAPIACSSCMRS 3 | VDGKAVCSQCERALCGQCVYTCWGCGALACVLCGLADYADDGEKTLCTSCAMFEA 4 | -------------------------------------------------------------------------------- /10/10.2/O60858-3.fasta: -------------------------------------------------------------------------------- 1 | MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE 2 | TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 3 | GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLD 4 | -------------------------------------------------------------------------------- /10/10.2/P01126.fasta: -------------------------------------------------------------------------------- 1 | MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 2 | GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 3 | PSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIILPGK 4 | -------------------------------------------------------------------------------- /10/10.2/P04491.fasta: -------------------------------------------------------------------------------- 1 | MKLTLEPAPRCLHEYVSQLLEDWQPECLSCEYSHGGSSPPSLHDLFDLELENSRSPSPLL 2 | CDWCAEADSESTISTETDVGFTLNTPPVSPLPSYSTSPASIPEDMLLCLEEMPTFDDGDE 3 | VRSATTSFEHWENNFDPNVGSFFGCLRCAYYQEQGENSICGLCYLKALAEGKIF 4 | -------------------------------------------------------------------------------- /10/10.2/P10543.fasta: -------------------------------------------------------------------------------- 1 | MEAWECLEDFSAVRNLLEQSSNSTSWFWRFLWGSSQAKLVCRIKEDYKWEFEELLKSCGE 2 | LFDSLNLGHQALFQEKVIKTLDFSTPGRAAAAVAFLSFIKDKWSEETHLSGGYLLDFLAM 3 | HLWRAVVRHKNRLLLLSSVRPAIIPTEEQQQEEARRRRRQEQSPWNPRAGLDPRE 4 | -------------------------------------------------------------------------------- /10/10.2/P10544.fasta: -------------------------------------------------------------------------------- 1 | MEVWAILEDLRQTRLLLENASDGVSGLWRFWFGGDLARLVFRIKQDYREEFEKLLDDIPG 2 | LFEALNLGHQAHFKEKVLSVLDFSTPGRTAAAVAFLTFILDKWIRQTHFSKGYVLDFIAA 3 | ALWRTWKARRMRTILDYWPVQPLGVAGILRHPPTMPAVLQEEQQEDNPRAGLDPPVEE 4 | -------------------------------------------------------------------------------- /10/10.2/P10546.fasta: -------------------------------------------------------------------------------- 1 | MKLTLEPAPRCLHEYVSQLLEDWQPECLSCEYSHGGSSRPSLHDLFDLELENSRSPSPLL 2 | CDWCAEADSESTISTETDVGFTLNTPPVSPLPSYSTSPASIPEDMLLCLEEMPTFDDGDE 3 | VRSATTSFESRREKNFDPHVGSFFGCLRCAYYQEQGENSICGLCYLKALAEGKIF 4 | -------------------------------------------------------------------------------- /10/10.2/P23497.fasta: -------------------------------------------------------------------------------- 1 | MADQKKVSEAAKEREIKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIP 2 | VQNVTASILKKVISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILA 3 | ANYLDIKGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 4 | -------------------------------------------------------------------------------- /10/10.2/P40938.fasta: -------------------------------------------------------------------------------- 1 | MASAVLGLTLRWVMFLSAVLLLLLPGASAQEPPGVGCSEYTNRSCEECLRNVSCLWCNEN 2 | KACLDYPVRKILPPASLCKLSSARWGVCWVNFEALIITMSVLGGSVLLGITVCCCCCCRR 3 | KRSRKPDKSDERAMREQEERRVRQEERRAEMKSRHDEIRKKYGLFKEQNPYEKF 4 | -------------------------------------------------------------------------------- /10/10.2/P54132.fasta: -------------------------------------------------------------------------------- 1 | MPVHSRGDKKETNHHDEMEVDYAENEGSSSEDEDTESSSVSEDGDSSEMDDEDCERRRME 2 | CLDEMSNLEKQFTDLKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQIRTKVA 3 | GIYRELCLESVKNKYECEIQASRQHCESCGTTSFSHGKRGRIRSAPTRRSRSLSQVHI 4 | -------------------------------------------------------------------------------- /10/10.2/Q07812-8.fasta: -------------------------------------------------------------------------------- 1 | MKTGALLLQGFIQDRAGRMGGEAPELALDPVPQDASTKKLSECLKRIGDELDSNMELQRM 2 | IAAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGW 3 | TLDFLRERLLGWIQDQGGWDGLLSYFGTPTWQTVTIFVAGVLTASLTIWKKMG 4 | -------------------------------------------------------------------------------- /10/10.2/Q14671.fasta: -------------------------------------------------------------------------------- 1 | MAPANLGLTPHWVMLLGAVLLLLLSGASAQEPPRVGCSEYTNRSCEECLRNVSCLWCNEN 2 | KACMDYPVRKILPPASLCKLSSARWGVCWVNFEALIITMSVLGGSVLLGITVCCCYCCRR 3 | KKSRKPDKSDERAMREQEERRVRQEERRAEMKSRHDEIRKKYGLFKEQNPYEKF 4 | -------------------------------------------------------------------------------- /10/10.2/Q4G009.fasta: -------------------------------------------------------------------------------- 1 | MAAAAELRLLEKSLGLKPGNKYSAQGERQIPVLQTNNGPSLMGLSTIATHLVKQASKEHL 2 | LGSTAEEKAMVQQWLEFRVTRVDGHSSKEDTQTLLKDLNSYLEDKVYLAGHNITLADILL 3 | YYGLHRFIVDLTVQEKEKYLNVSRWFCHIQHYPDIRQHLSSIVFIKNRLYANSH 4 | -------------------------------------------------------------------------------- /10/10.2/Q569K4-5.fasta: -------------------------------------------------------------------------------- 1 | MVPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPP 2 | GAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEAR 3 | NGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQPKA 4 | -------------------------------------------------------------------------------- /10/10.2/Q63184.fasta: -------------------------------------------------------------------------------- 1 | MEAWECLEDFSAVRNLLEQSSNSTSWFWRFLWGSSQAKLVCRIKEDYKWEFEELLKSCGE 2 | LFDSLNLGHQALFQEKVIKTLDFSTPGRAAAAVAFLSFIKDKWSEETHLSGGYLLDFLAM 3 | HLWRAVVRHKNRLLLLSSVRPAIIPTEEQQQQQEEARRRRQEQSPWNPRAGLDPRE 4 | -------------------------------------------------------------------------------- /10/10.2/Q7TNL3.fasta: -------------------------------------------------------------------------------- 1 | MDKVLNREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYK 2 | KMEDGVKYAHQPDFGGFWDATEVFASSLNPGVDAMYCKQWPECAKKMSANCICLLCLLRM 3 | KHENRKLYRKDPLVWVDCYCFDCFRMWFGLDLCEGTLLLWCDIIGQTTYRDLKL 4 | -------------------------------------------------------------------------------- /10/10.2/Q8N2I9-3.fasta: -------------------------------------------------------------------------------- 1 | MGLRQGNGTVSLGILATDPAPPTEPSSPTPCLRDGRVSENTVCLIRKLLVLDPQQRLAAA 2 | DVLEALSAIIASWQSLSSLSGPLQVVPDIDDQMSNADSSQEAKVTEECSQYEFENYMRQQ 3 | LLLAEEKSSIHDARSWVPKRQFGSAPPVRRLGHDAQPMTSLDTAILAQRYLRK 4 | -------------------------------------------------------------------------------- /10/10.2/Q99612.fasta: -------------------------------------------------------------------------------- 1 | MDRPGPGSARPGRTVHVWGYRVEWKVRNGRKLQPSEWAGRGDLGGFKRRWKDTRATVGTT 2 | FRRRSRVSLVGELSKFPLPSDSSGGKSSSSFARGALAWCRQRNPNPSCAAAETGARTSLP 3 | KERCRGWRLGNWLHKHPHPNTCPRLPACWLPPILTERGERVPKLVPLLACYPKSKPKD 4 | -------------------------------------------------------------------------------- /10/10.2/Q9DB27.fasta: -------------------------------------------------------------------------------- 1 | MAAAAELKLLEKSLGLRPGNKYSAQGERQIPVLQTNNGPSLTGLATIATHLVKQASKEHL 2 | LGSTAEEKALVQQWLEYRITQVDGHSSKEDTHTLLKDLNSYLEDKVYLAGYNITLADILL 3 | YYGLHRFIVDLTVQEKEKYLNVSRWFCHIQHYPDIRQHLSSVVFIKNRLYANSH 4 | -------------------------------------------------------------------------------- /10/10.2/Q9HB09-3.fasta: -------------------------------------------------------------------------------- 1 | MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 2 | VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 3 | PSYSRLLCFGGPAAGTAGPRAAEISAQPRITGSPIDREGSHTAEAGGPAGGGGRSH 4 | -------------------------------------------------------------------------------- /10/10.2/Q9ULZ3-3.fasta: -------------------------------------------------------------------------------- 1 | MGRARDAILDALENLTAEELKKFKLKLLSVPLREGYGRIPRGALLSMDALDLTDKLVSFY 2 | LETYGAELTANVLRDMGLQEMAGQLQAATHQGLHFIDQHRAALIARVTNVEWLLDALYGK 3 | VLTDEQYQAVRAEPTNPSKMRKLFSFTPAWNWTCKDLLLQALRESQSYLVEDLERS 4 | -------------------------------------------------------------------------------- /10/10.2/Q9Y3C4-2.fasta: -------------------------------------------------------------------------------- 1 | MQLTHQLDLFPECRVTLLLFKDVKNAGDLRRKAMEGTIDGSLINPTVIVDPFQILVAANK 2 | AVHLYKLGKMKTRTLSTEIIFNLSPNNNISEALKKFGISANDTSILIVYIEEGEKQINQE 3 | YLISQVEGHQVSLKNLPEIMNITEVKKIYKLSSQEESIGTLLDAIICRMSTKDVL 4 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/02-data_management/04-parsing_data/cell_cycle_proteins.txt: -------------------------------------------------------------------------------- 1 | P62258 2 | P61981 3 | P62191 4 | P17980 5 | P43686 6 | P35998 7 | P62333 8 | Q99460 9 | O75832 10 | -------------------------------------------------------------------------------- /10/10.2/O09181.fasta: -------------------------------------------------------------------------------- 1 | MFNLQKRINGNNEDGRYLETRIAVRDKLLAQELQQLETALRDQKQKLWHLEVPSTSCLHE 2 | LELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNS 3 | LDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRYC 4 | -------------------------------------------------------------------------------- /10/10.2/P0C1Z6.fasta: -------------------------------------------------------------------------------- 1 | MASSASGMEEVRSSVLTPLKLVGLVCIFLALCLDIGAVLSPAWVTADNQYYLSLWESCKK 2 | SENRWICDSTLQSDWQIATLALLLGGAAIILIAFLVGLISICVGSRRRFYRPVAVMLFAA 3 | VVLQVCGLVLYPIKFIETVTLKIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDYY 4 | -------------------------------------------------------------------------------- /10/10.2/P0DOV2.fasta: -------------------------------------------------------------------------------- 1 | MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 2 | KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 3 | YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTVPLSGSILPVWG 4 | -------------------------------------------------------------------------------- /10/10.2/P55965.fasta: -------------------------------------------------------------------------------- 1 | MNSSNGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSSHCDSPSPQE 2 | DGQIMFDVEMHTSRDHSSQSEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRH 3 | PKRSVSLSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIYIGKRLSTPSASTY 4 | -------------------------------------------------------------------------------- /10/10.2/P82798.fasta: -------------------------------------------------------------------------------- 1 | MDGSGEQPRGGGPTSSEQIMKTGALLLQGFIQDRAGRMGGEAPELALDPVPQDASTKKLS 2 | ECLKRIGDELDSNMELQRMIAAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKL 3 | VLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWTVTIFVAGVLTASLTIWKKMG 4 | -------------------------------------------------------------------------------- /10/10.2/Q5U2U6.fasta: -------------------------------------------------------------------------------- 1 | MSNDPPPPYPGGPTAPLLEEKSGAPPTPGRTSPAVMQPPPGMSLPPADIGPPPYEPPGHP 2 | MPQPGFIPPHVNADGTYMPSGFYPPPGPHPPMGYYPPGPYPPGPYAGPGGHTATVLVPSG 3 | AATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGPPSLLMQV 4 | -------------------------------------------------------------------------------- /10/10.2/Q8R143.fasta: -------------------------------------------------------------------------------- 1 | MAPGVARGPTPYWRLRLGGAALLLLLIPVAAAQEPPGAACSQNTNKTCEECLKNVSCLWC 2 | NTNKACLDYPVTSVLPPASLCKLSSARWGVCWVNFEALIITMSVVGGTLLLGIAICCCCC 3 | CRRKRSRKPDRSEEKAMREREERRIRQEERRAEMKTRHDEIRKKYGLFKEENPYARFENN 4 | -------------------------------------------------------------------------------- /10/10.2/Q8TE02-4.fasta: -------------------------------------------------------------------------------- 1 | MTPSEGARAGTGRELEMLDSLLALGGLVLLRDSVEWEGRSLLKALVKKSALCGEQVHILG 2 | CEVSEEEFREGFDSDINNRLVYHDFFRDPLNWSKTEEAFPGGPLGALRAMCKRTDPVPVT 3 | IALDSLSWLLLRLPCTTLCQVLHAVSHQDSCPGETPPSLFPLIHLPLPRSVPLFLSTLE 4 | -------------------------------------------------------------------------------- /10/10.2/Q96FV9.fasta: -------------------------------------------------------------------------------- 1 | MASSASGMEEVRSSVLTPLKLVGLVCIFLALCLDIGAVLSPAWVTADNQYYLSLWESCKK 2 | AENLWICDSTLESDWQIATLALLLGGAAIILIAFLVGLISICVGSRRRFYRPVAVMLFAA 3 | VVLQVCGLVLYPIKFIETVTLKIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDYY 4 | -------------------------------------------------------------------------------- /10/10.2/Q96PM5-4.fasta: -------------------------------------------------------------------------------- 1 | MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV 2 | QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL 3 | KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE 4 | -------------------------------------------------------------------------------- /10/10.2/P56950.fasta: -------------------------------------------------------------------------------- 1 | MGKGRFDEKENVSNCIQLKTSVIKGIKNQLLEQFPGIEPWLNQIMPKKDPVKIVRCHEHI 2 | EILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSP 3 | GAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKT 4 | YK 5 | -------------------------------------------------------------------------------- /10/10.2/Q07820.fasta: -------------------------------------------------------------------------------- 1 | MGKGRFDEKENVSNCIQLKTSVIKGIKNQLLEQFPGIEPWLNQIMPKKDPVKIVRCHEHI 2 | EILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSP 3 | GAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKT 4 | YK 5 | -------------------------------------------------------------------------------- /10/10.2/Q13472.fasta: -------------------------------------------------------------------------------- 1 | MASAGSGMEEVRVSVLTPLKLVGLVCIFLALCLDLGAVLSPAWVTADHQYYLSLWESCRK 2 | PASLDIWHCESTLSSDWQIATLALLLGGAAIILIAFLVGLISICVGSRRRFYRPVAVMLF 3 | AAVVLQVCSLVLYPIKFIETVSLKIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDY 4 | Y 5 | -------------------------------------------------------------------------------- /10/10.2/Q2HJ21.fasta: -------------------------------------------------------------------------------- 1 | MFKKFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIE 2 | ILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPG 3 | AKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTY 4 | K 5 | -------------------------------------------------------------------------------- /10/10.2/Q6PBE5.fasta: -------------------------------------------------------------------------------- 1 | MASAGSGMEEVRVSVLTPLKLVGLVCIFLALCLDLGAVLSPAWVTADHQYYLSLWESCRK 2 | PASLDIWHCESTLSSDWQIATLALLLGGAAIILIAFLVGLISICVGSRRRFYRPVAVMLF 3 | AAVVLQVCSLVLYPIKFIETVSLKIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDY 4 | Y 5 | -------------------------------------------------------------------------------- /10/10.2/Q8IWI9.fasta: -------------------------------------------------------------------------------- 1 | MGKGRFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHI 2 | EILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSP 3 | GAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKT 4 | YK 5 | -------------------------------------------------------------------------------- /10/10.2/Q9BQJ4.fasta: -------------------------------------------------------------------------------- 1 | MASSVSGAEEVRVSALTPLKLVGLVCVFLALCLDVGAVLSPAWVTADDQYHLSLWKSCSK 2 | PAASATWRCNSTLGTDWQIATLALLLGGAFLILLSFLVALVSVCIRSRRRFYRPVAIMLF 3 | AAVVLQACCLVLYPIKFIETISLRIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDY 4 | Y 5 | -------------------------------------------------------------------------------- /10/10.2/Q9DB27-2.fasta: -------------------------------------------------------------------------------- 1 | MFKKFDEKENVSNCIQLKTSVIKGIKNQLLEQFPGIEPWLNQIMPKKDPVKIVRCHEHIE 2 | ILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPG 3 | AKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTY 4 | K 5 | -------------------------------------------------------------------------------- /10/10.2/Q9H305.fasta: -------------------------------------------------------------------------------- 1 | MGQDNINLNKVDGQPSSPPQEQQQQQQYPPQGYPQQQQYPPQQGYPPQQYPPQQGYPPQQ 2 | YPPQQGYPQQQPPQQYPAPVGAPQQPYMATQQVVVQQVYVQPTFGVVPVDCICQHCQTRM 3 | STKTSYKSGSMVWLVCVLLIIFGCWLGCCLIPFGIDSLKDVQHKCSHCKKVLYRFDRMSG 4 | K 5 | -------------------------------------------------------------------------------- /10/10.2/Q9HAV5.fasta: -------------------------------------------------------------------------------- 1 | MASAGSGMEEVRVSVLTPLKLVGLVCIFLALCLDLGAVLSPAWVTADHQYYLSLWESCRK 2 | PANLDIWHCESTLGSGERPHPTSGAAPLAPAWPSWAPPLPPPLWEPPPPLSFAPLPASLP 3 | YLLGPWTPGPSCMCPSLEGVRVGKTPETSYALYSSLAHPSSFGVTRLLFWAIVIIEGENH 4 | VAV 5 | -------------------------------------------------------------------------------- /10/10.2/Q9JJG6-2.fasta: -------------------------------------------------------------------------------- 1 | MASAGSGMEEVRVSVLTPLKLVGLVCIFLALCLDLGAVLSPAWVTADHQYYLSLWESCRK 2 | PANLDIWHCESTLGSDWQIATLALLLGGAAIILIAFLVGLISICVGSRRRFYRPVAVMLF 3 | AAVVLQVCSLVLYPIKFIETVSLKIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDY 4 | Y 5 | -------------------------------------------------------------------------------- /10/10.2/Q9JJG6.fasta: -------------------------------------------------------------------------------- 1 | MASAGSGMEEVRVSVLTPLKLVGLVCIFLALCLDLGAVLSPAWVTADHQYYLSLWESCRK 2 | PASLDIWHCESTLSSDWQIATLALLLGGAAIILIAFLVGLISICVGSRRRFYRPVAVMLF 3 | AAVVLQVCSLVLYPIKFIETVSLKIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDY 4 | Y 5 | -------------------------------------------------------------------------------- /10/10.2/Q9ULC4-2.fasta: -------------------------------------------------------------------------------- 1 | MFKKFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIE 2 | ILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPG 3 | AKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTY 4 | K 5 | -------------------------------------------------------------------------------- /15/lysozyme .fasta: -------------------------------------------------------------------------------- 1 | >AAC37312.1 lysozyme [Bos taurus] 2 | MKALIILGFLFLSVAVQGKVFERCELARTLKKLGLDGYKGVSLANWLCLTKWESSYNTKATNYNPSSEST 3 | DYGIFQINSKWWCNDGKTPNAVDGCHVSCSELMENDIAKAVACAKHIVSEQGITAWVAWKSHCRDHDVSS 4 | YVQGCTL 5 | 6 | -------------------------------------------------------------------------------- /10/10.2/A6H7B5.fasta: -------------------------------------------------------------------------------- 1 | MQQKSQKKAELLDNEKPAAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTEN 2 | VQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRW 3 | DYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAK 4 | GDTEF 5 | -------------------------------------------------------------------------------- /10/10.2/O75414-2.fasta: -------------------------------------------------------------------------------- 1 | MASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFY 2 | REHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSFG 3 | LTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEGGVHYVAGT 4 | GGLGPA 5 | -------------------------------------------------------------------------------- /10/10.2/P02686-5.fasta: -------------------------------------------------------------------------------- 1 | MASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFGGDRGAPKRGSGKV 2 | PWLKPGRSPLPSHARSQPGLCNMYKDSHHPARTAHYGSLPQKSHGRTQDENPVVHFFKNI 3 | VTPRTPPPSQGKGAEGQRPGFGYGGRASDYKSAHKGFKGVDAQGTLSKIFKLGGRDSRSG 4 | SPMARR 5 | -------------------------------------------------------------------------------- /10/10.2/P61290.fasta: -------------------------------------------------------------------------------- 1 | MATLIFVDKDNEEPGRRLASKDGLKLGTGVKALDGKLQVSTPRVGKVFNAPAVPKASRKA 2 | LGTVNRVAEKPMKTGKPLQPKQPTLTGKKITEKSTKTQSSVPAPDDAYPEIEKFFPFNPL 3 | DFESFDLPEEHQISLLPLNGVPLMTLNEERGLEKLLHLGPPSPLKTPFLSWESGKGVRSN 4 | SGCKQLVT 5 | -------------------------------------------------------------------------------- /10/10.2/P90971.fasta: -------------------------------------------------------------------------------- 1 | MKCPDQKCLYTCQIKDGGVQPQFEIVPEDDPQNAIVSSSADACHAELLRTISTTMGKLMP 2 | NLLPAGADFFGFSHPAIHNLIQSCPGARKCINYQWVKFDVCKPGDGQLPEGLPENDAAMS 3 | FEAFQRQIFDEDQNDPLLPGSLDLPELQPAAFVSSYQPMYLTHEPLVDTHLQHLKSPSQG 4 | SPIQSSD 5 | -------------------------------------------------------------------------------- /10/10.2/Q3T1J1.fasta: -------------------------------------------------------------------------------- 1 | MCGTGGTDSKTRRPPHRASFLKRLESKPLKMADDLDFETGDAGASATFPMQCSALRKNGF 2 | VVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQ 3 | LIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 4 | AMAK 5 | -------------------------------------------------------------------------------- /10/10.2/Q9CZI9.fasta: -------------------------------------------------------------------------------- 1 | MQGEESLRILVEPEGDSFPLMEISTCETEASEQWDYVLVAQRHTQRDPRQARQQQFLEEL 2 | RRKGFHIKVIRDQKQVFFGIRADNSVFGLYRTLLLEPEGPAPHAELAAPTTIPVTTSLRI 3 | RIVNFVVMNNKTSAGETFEDLMKDGVFEARFPLHKVRGGPAWRGPWGGTLGWGLSLSVTR 4 | ARGRDA 5 | -------------------------------------------------------------------------------- /10/10.2/Q9H160.fasta: -------------------------------------------------------------------------------- 1 | MVELVENRSRQVDSHVELFEAHQDISDGTGGSGKAGQDKSKSEAITQADKPNNKRSRRQR 2 | NNENRENASNNHDHDDITSGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCL 3 | CNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGESEKTMDKALEKSKKE 4 | RAYNR 5 | -------------------------------------------------------------------------------- /10/10.2/Q9NRC8-3.fasta: -------------------------------------------------------------------------------- 1 | MAAGGLSRSERKAAERVRRLREEQQRERLRQVSRILRKAAAERSAEEGRLLAESADLVTE 2 | LQGRSRRREGLKRRQEEVCDDPEELRGKVRELASAVRNAKYLVVYTGAGISTAASIPDYR 3 | GPNGVWTLLQKGRSVSAADLSEAEPTLTHMSITRLHEQKLVRALGGWYTCQGPGRAPWCP 4 | VGN 5 | -------------------------------------------------------------------------------- /10/10.2/Q9NWV8-3.fasta: -------------------------------------------------------------------------------- 1 | MMGASTLQEPALSPGRCPRQPLRSKFGHHGSTVQRKCSKTNALNVSQKMIEMFVRTKHKI 2 | DKSHEFALVVVNDDTAWLSGLTSDPRELCSCLYDLETASCSTFNLEGLFSLIQQKTELPV 3 | TENVQTIPPPYVVRTILVYSRPPCQPQFSLTEPMKKMFQCPYFFFDVVYIHNGTEEKEEE 4 | MSWK 5 | -------------------------------------------------------------------------------- /10/10.2/Q9UFF9-3.fasta: -------------------------------------------------------------------------------- 1 | MYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMV 2 | KLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQ 3 | AGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDSAQEKMSILAI 4 | INNMQQ 5 | -------------------------------------------------------------------------------- /krother-python-for-biologists-e47cf55735c7/03-modular_programming/14-building_pipelines/pathvariables.py: -------------------------------------------------------------------------------- 1 | tophat_dir = '/home/RNA-seq/tophat' 2 | index_dir = '/home/RNA-seq/index' 3 | cufflinks_dir = '/home/RNA-seq/cufflinks' 4 | -------------------------------------------------------------------------------- /10/10.2/A0A1C5JB18.fasta: -------------------------------------------------------------------------------- 1 | VGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVGESDSTGTQIHFKPSAETFK 2 | NIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNE 3 | VFHFNIQRDDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIE 4 | QEGLAKK 5 | -------------------------------------------------------------------------------- /10/10.2/B0BN44.fasta: -------------------------------------------------------------------------------- 1 | MAGKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFAVREPL 2 | GLRVWQFLSAMLFSSVAIMALALPDQLYDAVFDGAEVTSKTPIRLYGGALLSISLIMWNA 3 | LYTAEKVIIRWTLLTEACYFGVQSLVVTATLAETGLMSLGTVLLLASRLLFVIVSIYYYY 4 | QVGRKPKKV 5 | -------------------------------------------------------------------------------- /10/10.2/O00268.fasta: -------------------------------------------------------------------------------- 1 | MYKFPQIKVEPVIPAPSPVIPRLTLRVGAGQDKIVISKVVPAPEAKPAPSLNRPKTPPPA 2 | PVPIPVRVSPTPLQPPLLTQAAVCPALMPSPAPALSGIGSAKAPVRSVVTETVSTYVIRD 3 | EWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIKKD 4 | KKHKKRKHRAH 5 | -------------------------------------------------------------------------------- /10/10.2/O15547.fasta: -------------------------------------------------------------------------------- 1 | MLRCGLACERCRWILPLLLLSAIAFDIIALAGRGWLQSSNHIQTSSLWWRCFDEGGGSGS 2 | YDDGCQSLMEYAWGRAAAATLFCGFIILCICFILSFFALCGPQMLVFLRVIGGLLALAAI 3 | FQIISLVIYPVKYTQTFRLHDNPAVNYIYNWAYGFGWAATIILIGCSFFFCCLPNYEDDL 4 | LGAAKPRYFYPPA 5 | -------------------------------------------------------------------------------- /10/10.2/O39929.fasta: -------------------------------------------------------------------------------- 1 | RNLGKVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSI 2 | FLLALLSCLTVPASAYQVRNSSGLYHVTNDCPNSSIVYEAADAILHTPGCVPCVHEGNVS 3 | RCWVAMTPTVATRDGKLPTTQLRRHIDLLVGSATLCSALYVGDLCGSVFLVGQLFTFSPR 4 | RHWTTQGCNCSI 5 | -------------------------------------------------------------------------------- /10/10.2/O75340-2.fasta: -------------------------------------------------------------------------------- 1 | MAAYSYRPGPGAGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPF 2 | NPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS 3 | GFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSY 4 | EQYLSMVFSIV 5 | -------------------------------------------------------------------------------- /10/10.2/O75340-3.fasta: -------------------------------------------------------------------------------- 1 | MAAYSYRPGPGAGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPF 2 | NPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS 3 | GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQ 4 | YLSMVFSIV 5 | -------------------------------------------------------------------------------- /10/10.2/O75832.fasta: -------------------------------------------------------------------------------- 1 | MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT 2 | HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNTSKHRWPTGDNIHAEH 3 | QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS 4 | GNLALASLL 5 | -------------------------------------------------------------------------------- /10/10.2/O77618.fasta: -------------------------------------------------------------------------------- 1 | MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 2 | VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGN 3 | SDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKM 4 | QPCTSSCDQPGF 5 | -------------------------------------------------------------------------------- /10/10.2/P01112-2.fasta: -------------------------------------------------------------------------------- 1 | MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 2 | QEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDL 3 | AARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPG 4 | CMSCKCVLS 5 | -------------------------------------------------------------------------------- /10/10.2/P06493.fasta: -------------------------------------------------------------------------------- 1 | MSNEPPPPYPGGPTAPLLEEKSGAPLTPGRTSPAVMQPPPGMPLPSADIAPPPYEPPGQP 2 | VPQPGFVPPHMNADGTYMPAGPYPPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAP 3 | VQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSC 4 | KAYICTYKRLC 5 | -------------------------------------------------------------------------------- /10/10.2/P10275.fasta: -------------------------------------------------------------------------------- 1 | MGRARDAILDALENLSGDELKKFKMKLLTVQLREGYGRIPRGALLQMDAIDLTDKLVSYY 2 | LESYGLELTMTVLRDMGLQELAEQLQTTKEESGAVAAAASVPAQSTARTGHFVDQHRQAL 3 | IARVTEVDGVLDALHGSVLTEGQYQAVRAETTSQDKMRKLFSFVPSWNLTCKDSLLQALK 4 | EIHPYLVMDLEQS 5 | -------------------------------------------------------------------------------- /10/10.2/P12004.fasta: -------------------------------------------------------------------------------- 1 | MAAKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFTIREPL 2 | GLRVWQFLSAVLFSGIAIMALAFPDQLYDAVFDGAQVTSKTPIRLYGGALLSISLIMWNA 3 | LYTAEKVIIRWTLLTEACYFGVQFLVVTATLAETGLMSLGILLLLVSRLLFVVISIYYYY 4 | QVGRRPKKA 5 | -------------------------------------------------------------------------------- /10/10.2/P12815-2.fasta: -------------------------------------------------------------------------------- 1 | MAAYSYRPGPGGGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPF 2 | NPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS 3 | GFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSY 4 | EQYLSMVFSIV 5 | -------------------------------------------------------------------------------- /10/10.2/P19525.fasta: -------------------------------------------------------------------------------- 1 | MRHLALEMISELLDLGLDTIDGWLHTEFRPVPAGVSHNMSLHEMYDLDVTGQEDENEEAV 2 | DGVFSDAMLLAAEEGIEMPNLYSPGPLVGGGEMPELQPEEEDLFCYEDGFPPSDSEEGPV 3 | SDSEPDEPDSTTADSNHGSPPTLRCTPPRDLPRPVPVKASPGKRPAVNSLHDLIEEVEQT 4 | VPLDLSLKRSRSN 5 | -------------------------------------------------------------------------------- /10/10.2/P20749.fasta: -------------------------------------------------------------------------------- 1 | MDGSGEQPRGGGPTSSEQIMKTGALLLQGFIQDRAGRMGGETPELGLEQVPQDASTKKLS 2 | ECLKRIGDELDSNMELQRMIAAVDTDSPREVFFRVAAEMFSDGNFNWGRVVALFYFASKL 3 | VLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGTPTWQTVTIFVAGV 4 | LTASLTIWKKMG 5 | -------------------------------------------------------------------------------- /10/10.2/P57724.fasta: -------------------------------------------------------------------------------- 1 | MAGKRALVILAKGAEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLED 2 | AHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPTALLAHGIAYG 3 | STVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQ 4 | VKAPLILKD 5 | -------------------------------------------------------------------------------- /10/10.2/Q01196-7.fasta: -------------------------------------------------------------------------------- 1 | MRIPVDASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVLADHPG 2 | ELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNA 3 | TAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRNSL 4 | TWPRYPHI 5 | -------------------------------------------------------------------------------- /10/10.2/Q14934-23.fasta: -------------------------------------------------------------------------------- 1 | MDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTT 2 | GCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDV 3 | HPLPAEGYNKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVPIQGITLEEVSEIIGRDLSGF 4 | PAPPGEEPPA 5 | -------------------------------------------------------------------------------- /10/10.2/Q14934-24.fasta: -------------------------------------------------------------------------------- 1 | MDFSPPRPPYPSYPHEDPACETPYLSEGFGYGMPPLYPQTGPPPSYRPGLRMFPETRGTT 2 | GCAQPPAVSFLPRPFPSDPYGGRGSSFSLGLPFSPPAPFRPPPLPASPPLEGPFPSQSDV 3 | HPLPAEGYNKVGPGYGPGEGAPEQEKSRGGYSSGFRDSVPIQGITLEEGGCGTGGCECEC 4 | VQEIALHVC 5 | -------------------------------------------------------------------------------- /10/10.2/Q4QQM4.fasta: -------------------------------------------------------------------------------- 1 | MAAKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFAVREPL 2 | GLRVWQFVSAVLFSGIAIMALAFPDQLYDAVFDGAQVTSKTPIRLYGGALLSISLIMWNA 3 | LYTAEKVIIRWTLLTEACYFSVQFLVVTATLAETGLASQGILLLLASRLLFVAISVYYYY 4 | QVGRKPKKV 5 | -------------------------------------------------------------------------------- /10/10.2/Q5R5X3.fasta: -------------------------------------------------------------------------------- 1 | MAAYSYRPGPGGGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPF 2 | NPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS 3 | GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQ 4 | YLSMVFSIV 5 | -------------------------------------------------------------------------------- /10/10.2/Q5ZM39.fasta: -------------------------------------------------------------------------------- 1 | MARARQEGSSPEPVEGLARDSPRPFPLGRLMPSAVSCSLCEPGLPAAPAAPALLPAAYLC 2 | APTAPPAVTAALGGPRWPGGHRSRPRGPRPDGPQPSLSPAQQHLESPVPSAPEALAGGPT 3 | QAAPGVRVEEEEWAREIGAQLRRMADDLNAQYERRRQEEQHRHRPSPWRVMYNLFMGLLP 4 | LPRDPGAPEMEPN 5 | -------------------------------------------------------------------------------- /10/10.2/Q6ZW49.fasta: -------------------------------------------------------------------------------- 1 | MIRCGLACERCRWILPLLLLSAIAFDIIALAGRGWLQSSDHGQTSSLWWKCSQEGGGSGS 2 | YEEGCQSLMEYAWGRAAAAMLFCGFIILVICFILSFFALCGPQMLVFLRVIGGLLALAAV 3 | FQIISLVIYPVKYTQTFTLHANPAVTYIYNWAYGFGWAATIILIGCAFFFCCLPNYEDDL 4 | LGNAKPRYFYTSA 5 | -------------------------------------------------------------------------------- /10/10.2/Q8NBR0.fasta: -------------------------------------------------------------------------------- 1 | MAAKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFAVREPL 2 | GLRVWQFLSAMLFSSVAIMALALPDQLYDAVFDGAEVTSKTPIRLYGGALLSISLIMWNA 3 | LYTAEKVIIRWTLLTEACYFGVQSLVVTATLAETGLMSLGTLLLLASRLLFVIVSIYYYY 4 | QVGRKPKKV 5 | -------------------------------------------------------------------------------- /10/10.2/Q8R0L9.fasta: -------------------------------------------------------------------------------- 1 | MFQRFTSLFFNTPAPPEDSNCPGASPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGP 2 | ARLQSNPLEDLLIEHPSMSVYVTGSTIVLESGPPSPHPEAALPDQDLSDGELAPALREPR 3 | ALHHAAAPMPARAVLLEKAGQVRRLQRARQRAERHTLSAKVLQRQNRARESRSRRPKHQG 4 | SFIYQPCQRQFNY 5 | -------------------------------------------------------------------------------- /10/10.2/Q92841.fasta: -------------------------------------------------------------------------------- 1 | MVATGSLSSKNPASISELLDCGYHPESLLSDFDYWDYVVPEPNLNEVIFEESTCQNLVKM 2 | LENCLSKSKQTKLGCSKVLVPEKLTQRIAQDVLRLSSTEPCGLRGCVMHVNLEIENVCKK 3 | LDRIVCDSSVVPTFELTLVFKQENCSWTSFRDFFFSRGRFSSGFRRTLILSSGFRLVKKK 4 | LYSLIGTTVIEGS 5 | -------------------------------------------------------------------------------- /10/10.2/Q96PG8.fasta: -------------------------------------------------------------------------------- 1 | MDGSGEQLGGGGPTSSEQIMKTGAFLLQGFIQDRAGRMAGETPELTLEQPPQDASTKKLS 2 | ECLRRIGDELDSNMELQRMIADVDTDSPREVFFRVAADMFADGNFNWGRVVALFYFASKL 3 | VLKALCTKVPELIRTIMGWTLDFLRERLLVWIQDQGGWDGLLSYFGTPTWQTVTIFVAGV 4 | LTASLTIWKKMG 5 | -------------------------------------------------------------------------------- /10/10.2/Q96PM5-5.fasta: -------------------------------------------------------------------------------- 1 | MAATAREDGASGQERGQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEV 2 | QCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKDKKQYHCENCGICRIGPKEDFFHCL 3 | KCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEY 4 | DQVLETAG 5 | -------------------------------------------------------------------------------- /10/10.2/Q99ML1.fasta: -------------------------------------------------------------------------------- 1 | MDGSGEQLGSGGPTSSEQIMKTGAFLLQGFIQDRAGRMAGETPELTLEQPPQDASTKKLS 2 | ECLRRIGDELDSNMELQRMIADVDTDSPREVFFRVAADMFADGNFNWGRVVALFYFASKL 3 | VLKALCTKVPELIRTIMGWTLDFLRERLLVWIQDQGGWEGLLSYFGTPTWQTVTIFVAGV 4 | LTASLTIWKKMG 5 | -------------------------------------------------------------------------------- /10/10.2/Q9C0K0.fasta: -------------------------------------------------------------------------------- 1 | MARARQEGSSPEPVEGLARDSPRPFPLGRLMPSAVSCGLCEPGLPAAPAAPALLPAAYLC 2 | APTAPPAVTAALGGPRWPGGHRSRPRGPRPDGPQPSLSPAQQHLESPVPSAPEALAGGPT 3 | QAAPGVRVEEEEWAREIGAQLRRMADDLNAQYERRRQEEQHRHRPSPWRVMYNLFMGLLP 4 | LPRDPGAPEMEPN 5 | -------------------------------------------------------------------------------- /10/10.2/Q9HAF1-2.fasta: -------------------------------------------------------------------------------- 1 | MAMHNKAAPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRG 2 | WDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGT 3 | ESDTSPDFHNQENEPSQEDPEDLDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRID 4 | LKLNKKPRADY 5 | -------------------------------------------------------------------------------- /10/10.2/Q9HAF1-3.fasta: -------------------------------------------------------------------------------- 1 | MAMHNKAAPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRG 2 | WDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGT 3 | ESDTSPDFHNQENEPSQEDPEDLDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHSPS 4 | GMFDYDFEYVY 5 | -------------------------------------------------------------------------------- /10/10.2/Q9HB65.fasta: -------------------------------------------------------------------------------- 1 | MAMHNKAAPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRG 2 | WDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGT 3 | ESDTSPDFHNQENEPSQEDPEDLDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRMN 4 | VSPKTGWHQLHL 5 | -------------------------------------------------------------------------------- /10/10.2/Q9JJP6.fasta: -------------------------------------------------------------------------------- 1 | MAAKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFTIREPL 2 | GLRVWQFVSAVLFSGIAIMALAFPDQLYDAVFDGAQVTSKTPIRLYGGALLSISLIMWNA 3 | LYTAEKVIIRWTLLTEACYFGVQFLVVTATLAETGLMSLGILLLLVSRLLFVVISIYYYY 4 | QVGRRPKKA 5 | -------------------------------------------------------------------------------- /10/10.2/Q9NZC7-4.fasta: -------------------------------------------------------------------------------- 1 | MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLP 2 | YGWEQETDENGQVFFVDHINKRTTYLDPRLAFTVDDNPTKPTTRQRYDGSTTAMEILQGR 3 | DFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWKTKYHPPP 4 | EKCRIKIFH 5 | -------------------------------------------------------------------------------- /10/10.2/Q9NZN8-4.fasta: -------------------------------------------------------------------------------- 1 | MVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCR 2 | PQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDW 3 | RYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPS 4 | TFNYNPAQQAF 5 | -------------------------------------------------------------------------------- /10/10.2/Q9UGJ0.fasta: -------------------------------------------------------------------------------- 1 | MPRGRSTRSWWGVRTTPACSASLTPSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPVV 2 | TSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFRSEERF 3 | KSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIKDSVMVLSATHRYKKK 4 | YVTTLLYKPI 5 | -------------------------------------------------------------------------------- /10/10.2/O09053.fasta: -------------------------------------------------------------------------------- 1 | MPVPLTSRHEVVPALDAGSSDSSSRQHRPGHDAVGEVEAWHRNCIAYTSPWSPCSTSCGL 2 | GVSTRISNVNAQCWPEQESRLCNLRPCDVDIHTLIKAGKKCLAVYQPEASMNFTLAGCIS 3 | TRSYQPKYCGVCMDNRCCIPYKSKTIDVSFQCPDGLGFSRQVLWINACFCNLSCRNPNDI 4 | FADLESYPDFSEIAN 5 | -------------------------------------------------------------------------------- /10/10.2/P22579.fasta: -------------------------------------------------------------------------------- 1 | MSRQTATALPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHL 2 | VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEEL 3 | CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM 4 | MQSCFGFHFMLVDLS 5 | -------------------------------------------------------------------------------- /10/10.2/P97586.fasta: -------------------------------------------------------------------------------- 1 | MSNVRVSNGSPSLERMDARQAEHPKPSACRNLFGPVNHEELTRDLEKHCRDMEEASQRKW 2 | NFDFQNHKPLEGRYEWQEVERGSLPEFYYRPPRPPKSACKVLAQESQDVSGSRQAVPLIG 3 | SQANSEDRHLVDQMPDSSDNPAGLAEQCPGMRKRPAAEDSSSQNKRANRTEENVSDGSPN 4 | AGTVEQTPKKPGLRRQT 5 | -------------------------------------------------------------------------------- /10/10.2/Q07812-2.fasta: -------------------------------------------------------------------------------- 1 | MDGSGEQPRGGGPTSSEQIMKTGALLLQGFIQDRAGRMGGEAPELALDPVPQDASTKKLS 2 | ECLKRIGDELDSNMELQRMIAAVDTDSPREVFFRVAADMFSDGNFNWGRVVALFYFASKL 3 | VLKALCTKVPELIRTIMGWTLDFLRERLLGWIQDQGGWDGLLSYFGTPTWQTVTIFVAGV 4 | LTASLTIWKKMG 5 | -------------------------------------------------------------------------------- /10/10.2/Q16288.fasta: -------------------------------------------------------------------------------- 1 | MGNIFGRWPGARKAIEDLHNTSSEPVGQASQDLQNKGGLTTNTLGTSADVLEYSADHTEE 2 | EVGFPVRPAVPMRPMTEKLAIDLSWFLKEKGGLDGLFFSPKRAAILDTWMYNTQGVFPDW 3 | QNYTPGPGIRYPLCRGWLFKLVPVDPPEDDEKNILLHPACSHGTTDPDGETLIWRFDSSL 4 | ARRHIARERYPEYFK 5 | -------------------------------------------------------------------------------- /10/10.2/Q3UPP8.fasta: -------------------------------------------------------------------------------- 1 | MFNVTNTTAQMEPSTSYSSPSNSNNRKRFLNECDSPNNDYTMMHRTPPVTGYASRLHGCV 2 | PPIETEHENCQSPSMKRSRCTNYSFRTLTLSTAEYTKVVEFLAREAKVPRYTWVPTQVVS 3 | HILPTEGLERFLTAIKAGHDSVLFNANGIYTMGDMIREFEKHNDIFERIGIDSSKLSKYY 4 | EAFLSFYRIQEAMKLPK 5 | -------------------------------------------------------------------------------- /10/10.2/Q5RBU4.fasta: -------------------------------------------------------------------------------- 1 | MSNVRVSNGSPSLERMDARQAEHPKPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKW 2 | NFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIG 3 | APANSEDTHLVDPKTDPSDSQTGLAEQCAGIRKRPATDDSSTQNKRANRTEENVSDGSPN 4 | AGSVEQTPKKPGLRRRQT 5 | -------------------------------------------------------------------------------- /10/10.2/Q5RC72.fasta: -------------------------------------------------------------------------------- 1 | MAAQGATAAVAATTSGTVGEGEPGPGENAAVEGPARSPGRVSPPTPARGEPEVTVEIGET 2 | YLCRRPDSTWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLALTKTVKDAVQ 3 | KNSEKYLSELAEQPERKITRNQKRKHDEINHVQKVLAPPFSGPSQQSHSNSHVKAGSMPG 4 | FFSRLFTYEKILSL 5 | -------------------------------------------------------------------------------- /10/10.2/Q80Z64.fasta: -------------------------------------------------------------------------------- 1 | MPFVPKWTLPTGLNVSIECKRVSGLEPATVDWAFDLTKTNMQTMYEQSEWGWKDREKREE 2 | MTDDRAWYLIAWENSSVPVAFSHFRFDVECGDEVLYCYEVQLESKVRRKGLGKFLIQILQ 3 | LMANSTQMKKVMLTVFKHNHGAYQFFREALQFEIDDSSPSMSGCCGEDCSYEILSRRTKF 4 | GDSHHSHAGGHCGGCCH 5 | -------------------------------------------------------------------------------- /10/10.2/Q9BXH1-2.fasta: -------------------------------------------------------------------------------- 1 | MARARQEGSSPEPVEGLARDGPRPFPLGRLVPSAVSCGLCEPGLAAAPAAPTLLPAAYLC 2 | APTAPPAVTAALGGSRWPGGPRSRPRGPRPDGPQPSLSLAEQHLESPVPSAPGALAGGPT 3 | QAAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLP 4 | LPRGHRAPEMEPN 5 | -------------------------------------------------------------------------------- /10/10.2/Q9R0Y5-2.fasta: -------------------------------------------------------------------------------- 1 | MEEKLKKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSERGKKLSAI 2 | MEKGELVPLDTVLDMLRDAMLAKVDSSNGFLIDGYPREVKQGEEFEQKIGQPTLLLYVDA 3 | GAETMTQRLLKRGETSGRVDDNEETIKKRLETYYNATEPVISFYDKRGIVRKVNAEGTVD 4 | TVFSEVCTYLDSLK 5 | -------------------------------------------------------------------------------- /10/10.2/Q9ULC4.fasta: -------------------------------------------------------------------------------- 1 | MAEAAAPGTTATTSGAGAAAAAVAAASLTSIPTVAAPSPGAGGGGGGSDGSGGGWTKQVT 2 | CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQEEVTAT 3 | DLSAKPSLAASSSLSSGVGSLAEMNSGEAESRNPSFPTVGAGSEDWVNAIEFVPGQPYCG 4 | RSKYCEDPVNCNQRAK 5 | -------------------------------------------------------------------------------- /10/10.2/Q9ULZ3-2.fasta: -------------------------------------------------------------------------------- 1 | MGRARDAILDALENLTAEELKKFKLKLLSVPLREGYGRIPRGALLSMDALDLTDKLVSFY 2 | LETYGAELTANVLRDMGLQEMAGQLQAATHQGSGAAPAGIQAPPQSAAKPGLHFIDQHRA 3 | ALIARVTNVEWLLDALYGKVLTDEQYQAVRAEPTNPSKMRKLFSFTPAWNWTCKDLLLQA 4 | LRESQSYLVEDLERS 5 | -------------------------------------------------------------------------------- /.idea/misc.xml: -------------------------------------------------------------------------------- 1 | 2 | 3 | 4 | -------------------------------------------------------------------------------- /10/10.2/A0A1C3UT09.fasta: -------------------------------------------------------------------------------- 1 | MKNFTQNEKGQMFYEGSLVLTAKDGSVFFVSTEMLVCKAYRAKAKKPFINTHYRTIERLK 2 | QAVGESIQSCNARYEQKLQNKEKTAERLKKFREELQVGDILSTCWGYEQTNVEFYQVVSK 3 | KGAFCEVREIAKRSHDTAFMQSEVSPKQNEFIGEPIKKKILDGYIMITSYIRATPHEYET 4 | LATGTKVYKRSYVSSYA 5 | -------------------------------------------------------------------------------- /10/10.2/A0A1H1ZPA0.fasta: -------------------------------------------------------------------------------- 1 | ARKVLAAKAFRHTAEYDVAVAGWLSGVAEPGDAELPSWIGGTWNRSAVLRYGENPHQQAA 2 | LYIGAAGQGLAQAEQLHGKEMSYNNYTDADAAWRAAWDQDKACAAIIKHANPCGIAVSDI 3 | SIADAHLKAHECDPLSAFGGVIAVNREVSVEMAERVADIFTEVIVAPGYADGAVEVLSRK 4 | KNVRLLRAAQPESGSTEWR 5 | -------------------------------------------------------------------------------- /10/10.2/A2T767.fasta: -------------------------------------------------------------------------------- 1 | MSTLIYVDKENGEPGIHVAPKDGLKLGSVPSVKALDGRSQVSTPHVGKMFDAPPALPKTA 2 | RKALGTVNRATEKSVKTNGPLKQKQTTFSTKKITEKTVKAKSSVPASDDTYPEIEKFFPF 3 | NPLDFENFDLPEEHQIARLPLSGVPLMILDEERELEQLLHVGPPSPLKMPPLLWESNLLQ 4 | SPSSILSTLDVELPPVCCDLDI 5 | -------------------------------------------------------------------------------- /10/10.2/D3ZJ96.fasta: -------------------------------------------------------------------------------- 1 | MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEI 2 | KIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAA 3 | EPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVI 4 | VALSSKSWDVETATELLLSN 5 | -------------------------------------------------------------------------------- /10/10.2/O15164.fasta: -------------------------------------------------------------------------------- 1 | MMQDVSSSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAGGGAGPGGAAGGGV 2 | GGGDEPGSPAQGKRGKKSAGCGGGGGAGGGGGSSSGGGSPQSYEELQTQRVMANVRERQR 3 | TQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDELDSKMASCSYVAH 4 | ERLSYAFSVWRMEGAWSMSASH 5 | -------------------------------------------------------------------------------- /10/10.2/O43189.fasta: -------------------------------------------------------------------------------- 1 | MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFS 2 | DRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLK 3 | ADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPG 4 | SDTIKPDVQKSKEYFSKQK 5 | -------------------------------------------------------------------------------- /10/10.2/P02686-3.fasta: -------------------------------------------------------------------------------- 1 | MGNHAGKRELNAEKASTNSETNRGESEKKRNLGELSRTTSEDNEVFGEADANQNNGTSSQ 2 | DTAVTDSKRTADPKNAWQDAHPADPGSRPHLIRLFSRDAPGREDNTFKDRPSESDELQTI 3 | QEDSAATSESLDVMASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFG 4 | GDRGAPKRGSGKVSSEE 5 | -------------------------------------------------------------------------------- /10/10.2/P02686-4.fasta: -------------------------------------------------------------------------------- 1 | MASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFGGDRGAPKRGSGKV 2 | PWLKPGRSPLPSHARSQPGLCNMYKDSHHPARTAHYGSLPQKSHGRTQDENPVVHFFKNI 3 | VTPRTPPPSQGKGRGLSLSRFSWGAEGQRPGFGYGGRASDYKSAHKGFKGVDAQGTLSKI 4 | FKLGGRDSRSGSPMARR 5 | -------------------------------------------------------------------------------- /10/10.2/P04603.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSIVGWPAIRERIRAAEGVGAVSQDLDKRGAITNSNTGATNADLAWLEAQEEE 2 | VGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGLIYSRKRQEILDLWVYHTQGYFPDWQ 3 | NYTPGPGPRFPLTFGWCFKLVPVDPEEVEKANEGENNCLLHPMSLHGMEDDDKEVLKWQF 4 | DSRLALRHIARERHPEYYKD 5 | -------------------------------------------------------------------------------- /10/10.2/P05854.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSVVGWPAVRERMRRAEPAADGVGAVSRDLEKHGAITSSNTAATNADCAWLEA 2 | QEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGY 3 | FPDWQNYTPEPGVRYPLTFGWCYKLVPVEPDKVEEANKGENTRLLHPVSLHGMDDPEREV 4 | LEWRFDSRLAFHHVARELHPEY 5 | -------------------------------------------------------------------------------- /10/10.2/P15941-14.fasta: -------------------------------------------------------------------------------- 1 | MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNALSTGVSF 2 | FFLSFHISNLQFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQ 3 | LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSGCLSVPPKELRAAGHLSSPGYL 4 | PSYERVPHLPHPWALCAP 5 | -------------------------------------------------------------------------------- /10/10.2/P19546.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSIVGWPNVRERMRAAEGVGKVSQDLDKHGAITSSNTRATNADLAWLEAQEEE 2 | VGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSKKRQEILDLWVYHTQGYFPDWQ 3 | NYTPGPGIRYPLTLGWCFKLVPVDPEEIEKANEGENNCLLHPISLHGMEDEDREVLRWKF 4 | DSSLALRHVARERHPEFYQD 5 | -------------------------------------------------------------------------------- /10/10.2/P22814.fasta: -------------------------------------------------------------------------------- 1 | MARPVNTNAETESRGRPTQGGGYASNNNGSCNNNNGSNNNNNNNNNNNNNSNNSNNNNGP 2 | TSSGRTNGKQRLTAAQQQYIKNLIETHITDNHPDLRPKSHPMDFEEYTDAFLRRYKDHFQ 3 | LDVPDNLTLQGYLLGSKLGAKTYSYKRNTQGQHDKRIHKRDLANVVRRHFDEHSIKETDC 4 | IPQFIYKVKNQKKKFKMEFRG 5 | -------------------------------------------------------------------------------- /10/10.2/P23921.fasta: -------------------------------------------------------------------------------- 1 | MCRTLAAFPTTCLERAKEFKTRLGIFLHKSELGCDTGSTGKFEWGSKHSKENRNFSEDVL 2 | GWRESFDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHQIFEE 3 | FICSEAPKEVNIDHETHELTRMNLQTATATCFDAAQGKTRTLMEKDSYPRFLKSPAYRDL 4 | AAQASAASATLSSCSLDEPSHT 5 | -------------------------------------------------------------------------------- /10/10.2/P25911.fasta: -------------------------------------------------------------------------------- 1 | MYLFPRQLLVKHFWTPKQQIDFLDVYHGLRRRSHSEVITHLRRASTFVSHEKLRRQLTDL 2 | CTKVQSGTHPAAQDVLALRDCFSTYPLGFSQLQASQMRALSQAMLLTPYLPPPLLRQRLK 3 | SHTTVIHQLDRALAKLGIGQLTAQEVKSACYLRGLNSTHIADDRCRAWLGEWLHISCSLK 4 | EPELSLLLHNVVLLSTNYLETRR 5 | -------------------------------------------------------------------------------- /10/10.2/P34152-9.fasta: -------------------------------------------------------------------------------- 1 | MAAAYLDPNLNHTPSSSTKTHLGTGMERSPGAMERVLKVFHYFESSSEPTTWASIIRHGD 2 | ATDVRGIIQKIVDSHKVKHVACYGFRLSHLRSEEVHWLHVDMGVSSVREKYELAHPPEEW 3 | KYELRIRYLPKGFLNQFTEDKPTLNFFYQQVKSDYMQEIADQVDQEIALKLGCLEIRRSY 4 | WEMRGNALEKKSNYEVLE 5 | -------------------------------------------------------------------------------- /10/10.2/P39689.fasta: -------------------------------------------------------------------------------- 1 | MNDRNNRWRTMKDEETFEISIPFEEAPHLDSQILYRLSPSRRNVEEPPEGASPTLALMSS 2 | VKAQLHMALERNSWLQKRIEDLEEERDFLRCQLDKFISSARMDAEDYCRMKPGPRRVDGD 3 | SRAGVGEASDPESAASSFSGVSEDGSASERKRQKQKGSTSRKRFGKTKARERQRGEWGVG 4 | TCDGCVEGLCTQNRSVSSTVMP 5 | -------------------------------------------------------------------------------- /10/10.2/P53801.fasta: -------------------------------------------------------------------------------- 1 | MATLIFVDKDNEEPGSRLASKDGLKLGSGVKALDGKLQVSTPRVGKVFGAPGLPKASRKA 2 | LGTVNRVTEKPVKSSKPLQSKQPTLSVKKITEKSTKTQGSAPAPDDAYPEIEKFFPFDPL 3 | DFESFDLPEEHQISLLPLNGVPLMILNEERGLEKLLHLDPPSPLQKPFLPWESDPLPSPP 4 | SALSALDVELPPVCYDADI 5 | -------------------------------------------------------------------------------- /10/10.2/P58340-3.fasta: -------------------------------------------------------------------------------- 1 | MRQMIRSFSEPFGRDLLSISDGRGRAHNRRGHNDGEDSLTHTDVSSFQTMDQMVSNMRNY 2 | MQKLERNFIKETRKAMRDSDSGLEKMAIGHHIHDRAHVIKKSKNKKTGDEEVNQEFINMN 3 | ESDAHAFDEEWQSEVLKYKPGRHNLGNTRMRSVGHENPGSRELKRREKPQQSPAIEHGRR 4 | SNVLGDKLHIKGSSVKSNKK 5 | -------------------------------------------------------------------------------- /10/10.2/P61086-2.fasta: -------------------------------------------------------------------------------- 1 | MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEI 2 | KIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAA 3 | EPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVI 4 | VALSSKSWDVETATELLLSN 5 | -------------------------------------------------------------------------------- /10/10.2/P68399.fasta: -------------------------------------------------------------------------------- 1 | MEARDKQVLRLLRLELGAEVLVEGLVLQYLYQEGILTENHVQEINAQTTGLRKTMLLLDI 2 | LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI 3 | NQLAQRLGPEWEPVVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL 4 | HNGLRAVEVDPSLLLHMLE 5 | -------------------------------------------------------------------------------- /10/10.2/P78560-2.fasta: -------------------------------------------------------------------------------- 1 | MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 2 | LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI 3 | NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL 4 | HNGLRAVEVDPSLLLHMLE 5 | -------------------------------------------------------------------------------- /10/10.2/P97613.fasta: -------------------------------------------------------------------------------- 1 | MATLIYVDKENGEPGTRVAAKDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKAT 2 | RKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPF 3 | NPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGXPSPVKMPSPPWESNLLQ 4 | SPSSILSTLDVELPPVCCDIDI 5 | -------------------------------------------------------------------------------- /10/10.2/Q4KM77.fasta: -------------------------------------------------------------------------------- 1 | MAAAAGAAAAAAAEGEAPAEMGALLLEKETRGATERVHGSLGDTPRSEETLPKATPDSLE 2 | PAGPSSPASVTVTVGDEGADTPVGATPLIGDESENLEGDGDLRGGRILLGHATKSFPSSP 3 | SKGGSCPSRAKMSMTGAGKSPPSVQSLAMRLLSMPGAQGAAAAGSEPPPATTSPEGQPKV 4 | HRARKTMSKPGNGQVSGMGEMG 5 | -------------------------------------------------------------------------------- /10/10.2/Q4R741.fasta: -------------------------------------------------------------------------------- 1 | MCRTLATFPNTCLERAKEFKTRLGIFLHKSELSSDTGGISKFEWASKHNKERSFSEDVLG 2 | WRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEY 3 | IRSEAPKEVNIDHETRELTKTNLQAATTSCFDVAQGKTRTLMEKDSYPRFLKSPAYRDLA 4 | AQASATSTSAPSGSPAEPSHT 5 | -------------------------------------------------------------------------------- /10/10.2/Q4V8F5.fasta: -------------------------------------------------------------------------------- 1 | MFQRFTSLFFSTPAPPEDSNCPGAFVSEEDEVDGWLIIDLQDSYTAPPDPRASPAPAGRP 2 | PPAPSLMDESWFVTPPACFTAEGPGLGPARLQSNPLEDLLIEHPSMSVYVTGSTIVLESG 3 | PPSPHPEAALPDQDLSDGELAPARREPRALHHAAAPMPARAVLLEKAGQVRRLQRARQRA 4 | ERHTLSAKVLQRQNRARES 5 | -------------------------------------------------------------------------------- /10/10.2/Q502I1.fasta: -------------------------------------------------------------------------------- 1 | MSGECQSPDCPGTRAEFFFKCGAHPTSDKDTSVALNLITNNSRSIPCIACTDVRNPVLVF 2 | QCNHRHVICLDCFHLYCVTRLNDRQFVHDAQLGYSLPCVAGCPNSLIKELHHFRILGEEQ 3 | YNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEQGQKKVTCEGGNGLGCGFVFCRDCKEA 4 | YHEGECDSMFEASGATSQEDVCT 5 | -------------------------------------------------------------------------------- /10/10.2/Q5R6I4.fasta: -------------------------------------------------------------------------------- 1 | MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEIKAQTTGLRKTMLLLDI 2 | LPSRGPKAFDTFLDSLQEFPWVREKLEKAREEVTAELPTGDWMAGIPSHILSSSPSDQQI 3 | NQLAQRLGPEWEPVVLSLGLSQTDIYRCKANHPHNVHSQVVEAFVRWRQRFGKQATFLSL 4 | HKGLQAVEADPSLLQHMLE 5 | -------------------------------------------------------------------------------- /10/10.2/Q5VWG9.fasta: -------------------------------------------------------------------------------- 1 | MCLLSSSAASDLAATSLTAHPCHPPLPRQPQPQLILSGSPSIGTVPPPAVGHTSLLPVNP 2 | PAISTTTSDLSAREDATPSASTGHLSVFPAFQVKIPAVPSEQTSQSFSEASHRVLPGGGP 3 | RCSRDFGAGVAGHLGLGIFGVGFGSPALLQSVVDENSCCLLYVVEDQLCDVEQAFRAEHL 4 | GQHQSGSGTGCRHCPQRPAAL 5 | -------------------------------------------------------------------------------- /10/10.2/Q6P767.fasta: -------------------------------------------------------------------------------- 1 | MATLIYVDKENGEPGTRVVAKDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKAT 2 | RKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPF 3 | NPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNLLQ 4 | SPSSILSTLDVELPPVCCDIDI 5 | -------------------------------------------------------------------------------- /10/10.2/Q8CH18.fasta: -------------------------------------------------------------------------------- 1 | MEAEAGGLEELTDEEMAALGKEELVRRLRREEAARLAALVQRGRLMQEVNRQLQGHLGEI 2 | RELKQLNRRLQAENRELRDLCCFLDSERQRGRRAARQWQLFGTQASRAVREDLGGCWQKL 3 | AELEGRQEELLRENLALKELCLALGEEWGPRGGPSGAGGSGAGPAPELALPPCGPRDLGD 4 | GSSSTGSVGSPDQLPLACSPDD 5 | -------------------------------------------------------------------------------- /10/10.2/Q9CQJ7-2.fasta: -------------------------------------------------------------------------------- 1 | MATLIFVDKDNEEPGRRLASKDGLKLGTGVKALDGKLQVSTPRVGKVFNAPAVPKASRKA 2 | LGTVNRVAEKPMKTGKPLQPKQPTLTGKKITEKSTKTQSSVPAPDDAYPEIEKFFPFNPL 3 | DFESFDLPEEHQISLLPLNGVPLMTLNEERGLEKLLHLGPPSPLKTPFLSWESDPLYSPP 4 | SALSTLDVELPPVCYDADI 5 | -------------------------------------------------------------------------------- /10/10.2/Q9CQJ7.fasta: -------------------------------------------------------------------------------- 1 | MATLIYVDKENGEPGTRVAAKDGLKLGSAPSIKALDGRSQVSTPRFGKTFDAPPALPKAT 2 | RKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPF 3 | NPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGPPSPVRMPSPPWESNLLQ 4 | SPSSILSTLDVELPPVCCDIDI 5 | -------------------------------------------------------------------------------- /10/10.2/Q9HAF1-4.fasta: -------------------------------------------------------------------------------- 1 | MAMHNKAAPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRG 2 | WDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGT 3 | ESDTSPDFHNQENEPSQEDPEDLDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHSPS 4 | GMFDYDFEIDLKLNKKPRADY 5 | -------------------------------------------------------------------------------- /10/10.2/Q9QSQ6.fasta: -------------------------------------------------------------------------------- 1 | MGNKWSKSWPQVRERMRRAPAPAADGVGAVSQDLAKHGAITSSNTAATNADCAWLEAQTE 2 | EEVGFPVKPQIPLRPMTYKGAVDLSFFLKEKGGLDGLIYSKKRQEILDLWVHNTQGYFPD 3 | WQNYTPGPGIRYPLTFGWCYKLVPVDPSEVEEANEGENNCLLHPICQHGIEDEEREVLQW 4 | KFDSSLARRHIARELHPEFYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/Q9U903.fasta: -------------------------------------------------------------------------------- 1 | MDAFDRSPTDKELVAQAKALGREYVHARLLRAGLSWSAPERASPAPGGRLAEVCTVLLRL 2 | GDELEQIRPSVYRNVARQLHIPLQSEPVVTDAFLAVAGHIFSAGITWGKVVSLYSVAAGL 3 | AVDCVRQAQPAMVHALVDCLGEFVRKTLATWLRRRGGWTDVLKCVVSTDPGFRSHWLVAT 4 | LCSFGRFLKAAFFLLLPER 5 | -------------------------------------------------------------------------------- /10/10.2/Q9Y4A5.fasta: -------------------------------------------------------------------------------- 1 | MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEI 2 | KIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAA 3 | EPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVI 4 | VALSSKSWDVETATELLLSN 5 | -------------------------------------------------------------------------------- /10/10.1_number_of_fastas.py: -------------------------------------------------------------------------------- 1 | def fastas_number(filename): 2 | i = 0 3 | inf = open(filename, 'r') 4 | for line in inf: 5 | if line.startswith('>'): 6 | i += 1 7 | print(i) 8 | return i 9 | 10 | fastas_number('SwissProt.fasta') -------------------------------------------------------------------------------- /10/10.2/A0A0I9PHJ4.fasta: -------------------------------------------------------------------------------- 1 | VVFECTGLFTSRDKAAAHLTAGARKVIISAPASGADATIVYGVNHDTLRQSHQIISSASC 2 | TTNCLAPVAQVLHRELGIENGLMTTIHAYTNDQNLIDVYHTDPYRARSATQSMIPSKTGA 3 | AEAVGLVLPELAGKLTGMAVRVPVINVSLVDLTVTLKRETTVDEVNALMKEASQHSKVLG 4 | YNTLPLVSHDFNHNPLSSIF 5 | -------------------------------------------------------------------------------- /10/10.2/O35147-2.fasta: -------------------------------------------------------------------------------- 1 | MGTPKQPSLAPAHALGLRKSDPGIRSLGSDAGGRRWRPAAQSMFQIPEFEPSEQEDASTT 2 | DRGLGPSLTEDQPGPYLAPGLLGSIVQQQPGQAANNSHHGGAGTMETRSRHSSYPAGTEE 3 | DEGMEEELSPFRGRSRSAPPNLWAAQRYGRELRRMSDEFEGSFKGLPRPKSAGTATQMRQ 4 | SASWTRIIQSWWDRNLGKGGSTPSQ 5 | -------------------------------------------------------------------------------- /10/10.2/O36006.fasta: -------------------------------------------------------------------------------- 1 | YSPALNKMFCQLAKTCPVYLRISSPPPPGTRVRAMAIYKKSEFMTEVVRRCPHHERCSDS 2 | SDGLAPPQHLIRVEGNLRAEYLDDRNTLRHSVVVPYEPPEVGSDCTTIHYNFMCNSSCMG 3 | GMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENFRKKEEPCPEPPPRST 4 | KRVLSSNTSSSPPQKEDPLDGEYFTLH 5 | -------------------------------------------------------------------------------- /10/10.2/O41804.fasta: -------------------------------------------------------------------------------- 1 | MGNKWSKCSTVGRPAIRERMRRAPAAEGVGPASQDSDKYGALTSSSTPANNADCAWLEAQ 2 | QEEEEVGFPVRPQVPLRPMTYKAVVDLSFFLEEKGGLEGLIYSKKRQDILDLWVYNTQGY 3 | FPDWQNYTPGPGVRFPLTFGWCFKLVPVDPREVEEANTGENNSLLHPMSLHGMEDSHREV 4 | LQWKFDSLLARRHMARELHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/O60356.fasta: -------------------------------------------------------------------------------- 1 | MEGAAAPVAGDRPDLGLGAPGSPREAVAGATAALEPRKPHGVKRHHHKHNLKHRYELQET 2 | LGKGTYGKVKRATERFSGRVVAIKSIRKDKIKDEQDMVHIRREIEIMSSLNHPHIISIYE 3 | VFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQIVSAVHYCHKNGVVHRDLK 4 | LKKTSRENQVTTLPQSAVSLRSCWTVMM 5 | -------------------------------------------------------------------------------- /10/10.2/O89293.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSVVGWPAVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAANNAACAWLEA 2 | QEEEKVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGY 3 | FPDWQNYTPGPGIRYPLTFGWCYKLVPVEPEKLEEANKGENTSLLHPVSLHGMDDPEREV 4 | LEWRFDSRLAFHHVARELHPEYFKNC 5 | -------------------------------------------------------------------------------- /10/10.2/O89945.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSVIGWPTVRERMRRAEPAADRVGAASRDLEKHGAITSSNTAATNAACAWLEA 2 | QEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGY 3 | FPDWQNYTPGPGVRYPLTFGWCYKLVPVEPDKIEEANKGENTSLLHPVSLHGMDDPEREV 4 | LEWRFDSRLAFHHVARELHPEYFKNC 5 | -------------------------------------------------------------------------------- /10/10.2/O96017-6.fasta: -------------------------------------------------------------------------------- 1 | MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTL 2 | SSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKS 3 | CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKR 4 | RPLNNNSEIALSLSRNKVVPVER 5 | -------------------------------------------------------------------------------- /10/10.2/P03406.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSIVGWSTVRERMRKTPPAADGVGAVSQDLDKHGAVTSSNTAFNNPDCAWLEA 2 | QEDEDVGFPVRPQVPLRPMTFKGAFDLGFFLKEKGGLDGLIYSKRRQEILDLWVYHTQGF 3 | FPDWQNYTPGPGIRYPLTFGWCYKLVPVDPREVEEATEGENNCLLHPVNQHGMEDEHREV 4 | LKWKFDSSLARKHVAREMHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P03407.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSIVGWPAIRERMRRTPPTPPAAEGVGAVSQDLERRGAITSSNTRANNPDLAW 2 | LEAQEEDEVGFPVRPQVPLRPMTYKGAVDLSHFLKEKGGLEGLIYSKRRQEILDLWVYHT 3 | QGYFPDWQNYTPGPGIRYPLTMGWCFKLVPVDPEEVEKANEGENNCLLHPMSQHGMEDED 4 | KEVLKWEFDSRLALRHIARERHPEYYQD 5 | -------------------------------------------------------------------------------- /10/10.2/P04602.fasta: -------------------------------------------------------------------------------- 1 | MGNKWSKSWPQVRDRMRRAAPAPAADGVGAVSQDLAKHGAITSSNTAATNDDCAWLEAQT 2 | EEEVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLDGLIYSKKRQEILDLWVHNTQGYFP 3 | DWQNYTPGPGTXYPLTFGWCFKLVPVDPSEVEEANEGENNCLLHPACQHGIEDEEREVLK 4 | WKFDSSLARRHIARELHPEFYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P05857.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSKMGWPAVRERMKRAEPAADGVGAASRDLEKHGALTSSNTAATNADCAWLEAQ 2 | EDEEVGFPVKPQVPLRPMTYKAALDLSHFLKEKGGLEGLVYSQKRQDILDLWIYHTQGYF 3 | PDWQNYTPGPGVRFPLTFGWCFKLVPVEPEKVEEANEGENNSLLHPMSLHGMEDPEKEVL 4 | VWKFDSHLAFRHMARELHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P05858.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSLVGWPAIRERIRKTDPAADGVGAVSRDLEKHGAITSSNTASTNDTCAWLEA 2 | QEESEEVGFPVRPQVPLRPMTYKEAVDLSHFLKEKGGLEGLIWSKKRQEILDLWVYNTQG 3 | IFPDWQNYTPGPGIRYPLTFGWCFQLVPVDPQEVEEATEREDNCLLHPMCQQGMEDPERQ 4 | VLMWRFNSRLALEHKARELHPEFYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P12479.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSIVGWPQIRERIRQTPVAAEGVGAVSQDLARHGAITSSNTATNNPDCAWLEA 2 | QEEDSDVGFPVRPQVPLRPMTYKAAFDLSFFLKEKGGLDGLIYSKRRQDILDLWVYNTQG 3 | FFPDWQNYTPGPGTRLPLTFGWCFKLVPMDPAEIEEANKGENISLLHPICQHGMEDEDRE 4 | VLVWRFNSSLARRHLARELHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P12480.fasta: -------------------------------------------------------------------------------- 1 | MGGTMSKCSPVGWPAIRERIRRAAPAAEGVGAASRDLDKYGALTSSNTPANNPDCAWLEA 2 | QEEEEEVGFPVRPQVPLRPMTYKAAFDLSLFLKEKGGLEGLIYSKKRQEILDLWVYNTQG 3 | FFPDWQNYTPGPGVRYPLTFGWCFKLVPVDPSEVEEINEGENNCLLHPASLHGMEDEDRE 4 | VLKWKFDSHLARRHMARELHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P12481.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKRMSGWSAVRERMKRAEPAEPAADGVGAVSRDLEKHGAITSSNTAANNADCAWL 2 | EAQEDEDVGFPVRPQVPLRPMTYKAALDLSHFLKEKGGLEGLIYSQKRQDILDLWIHHTQ 3 | GYFPDWQNYTPGPGIRYPLTFGWCFKLVPVDPDYVEEANAGENNSLLHPMSQHGMDDPEK 4 | EVLVWRFDSRLAFHHMARELHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P15941-11.fasta: -------------------------------------------------------------------------------- 1 | MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAIPAPTTT 2 | KSCRETFLKCFCRFINKGVFWASPILSSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVA 3 | LAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKV 4 | SAGNGGSSLSYTNPAVAATSANL 5 | -------------------------------------------------------------------------------- /10/10.2/P18801.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKRVTGWPTVRERMRRAEPAELAADGVGAASRDLEKHGALTSSNTAATNADCAWL 2 | EAQEEEEVGFPVKPQVPLRPMTYKAALDLSHFLKEKGGLDGLIYSQKRQDILDLWVYHTQ 3 | GYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPEKIEEANKGENNCLLHPMSQHGMDDPER 4 | EVLVWKSDSHLAFQHYARELHPEYYKNC 5 | -------------------------------------------------------------------------------- /10/10.2/P19545.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSKMGGWPAVRERMQKAEPAADGVGAASRDLEKHGTITSSNTAANNAACTWLEA 2 | QEDEDEEVGFPVRPQVPLRPMTFKAAVDLSHFLKEKGGLDGLVFSQKRQDILDLWVYHTQ 3 | GYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPDKVEEATEGENNSLLHPICLHGMDDPEK 4 | EVLVWKFDSRLAFHHVAREKHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P20867.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSIVGWPAIRERIRRTNPAADGVGAVSRDLEKHGAITSSNTASTNADCAWLEA 2 | QEESDEVGFPVRPQVPLRPMTYKEALDLSHFLKEKGGLEGLIWSKKRQEILDLWVYNTQG 3 | IFPDWQNYTPGPGIRYPLTFGWCYELVPVDPQEVEEDTEGETNSLLHPICQHGMEDPERQ 4 | VLKWRFNSRLAFEHKAREMHPEFYKN 5 | -------------------------------------------------------------------------------- /10/10.2/P24741.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKGCISGWPAVRERIRQTEPAAEGVGAVSQDLDRRGAVTINNIASNNADSAWLEA 2 | QEEEEEVGFPVRPQVPLRPMTYKGAFDLSHFLKEKGGLEGLIYSKKRQEILDLWVYNTQG 3 | YFPDWHNYTPGPGERYPLTFGWCFKLVPVDPQDVEKANEGENNSLLHPMCQHGIEDPERE 4 | VLMWKFDSRLALRHRAKELHPEFYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P35959.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSIVGWPEVRERIRNTPTAAEGVGAVSQDLDRHGAITSSNTAANNPDCAWLEA 2 | QEEDSEVGFPVRPQVPLRPMTFKGAFDLSFFLKEKGGLDGLIYSKKRQEILDLWVYNTQG 3 | YFPDWQNYTPGPGTRFPLTFGWCFKLVPMDPAEVEEANKGENNSLLHPICQHGMEDEDRE 4 | VLVWRFDSSLARRHIARELHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P46736-5.fasta: -------------------------------------------------------------------------------- 1 | MRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQ 2 | SIQAQKSSESLHGPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPHVTIGKVCLESAVE 3 | LPKILCQEEQDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQN 4 | QQHLQELQQEKEELMQELSSLE 5 | -------------------------------------------------------------------------------- /10/10.2/P48734.fasta: -------------------------------------------------------------------------------- 1 | MASDPPPPYPGGPSAPLLEDKHGAPRMEEPRPAPYPQAMAFAPPDCGPPPYDANPGYIAP 2 | NPGFYPPPGPYVPMGYYPPSPSQFQPPYPSQYSSPGAQGTAVILPPGPTSTSGTTTVTSN 3 | TTTVTVLHGEIFQGSPVQTVCQHCQQPITTKISHEIGLMNFLLCCFCCFVGCDLGCCLIP 4 | CIINDLKDVTHTCPNCKAVIYTYRRMC 5 | -------------------------------------------------------------------------------- /10/10.2/P97305.fasta: -------------------------------------------------------------------------------- 1 | MGKVWSKSSLVGWPQVIDRMRRQQDPAEGVGAVSQDLANRGAITIRNTKENNQALAWLEE 2 | QKEEAVGFPVCPQVPLRPMTYKEAFDLSFFLREKGGLEGLVWSTKRQEILDLWVYHTQGI 3 | FPDWQNYTPGPGVRYPLTFGWCFKLVPLSPEEVEEANQGDNNVLLHPMCQHGMEDPDKEV 4 | LVWRFDSSLARVHRARELHPEFYQNC 5 | -------------------------------------------------------------------------------- /10/10.2/P97313.fasta: -------------------------------------------------------------------------------- 1 | MLALRCGPRLLGLLSGPRSAPLLLSATRTCSDGGARGANSSSGNPLVYLDVGADGQPLGR 2 | VVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIY 3 | GSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVV 4 | KKIESFGSKSGKTSKKIVITDCGQLS 5 | -------------------------------------------------------------------------------- /10/10.2/Q00535.fasta: -------------------------------------------------------------------------------- 1 | MASDPPPPYPGGPSAPLLEEKQGLPRMEEPRAAPYPQAMPFAPPDCGPPPYDANPGYIAP 2 | NPGFYPPPGPYAPMGYYPPTPGQFQPPYPSQYPSPGAQGTAVIVPPGPSSTSAATTVTST 3 | TTTVTVLQGEIFQGSPVQTVCTNCQQPITTKISHDIGLMNFLLCCFCCFVGCDLGCCLIP 4 | CIINDLKDVTHSCPNCKYHIYTYRRMC 5 | -------------------------------------------------------------------------------- /10/10.2/Q12968.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSLVGWPEVRDRLRRTQTAAEGVGPVSRDLARHGAITSRNTSQTNETLAWLEE 2 | VQNEEVGFPVRPQVPLRPMTFKGAFDLSHFLKEKGGLEGLVYSKKRQEILDLWVYHTQGF 3 | FPDWQNYTPGPGIRYPLTFGWCFKLVPLEPEEVERANEGDNNILLHPICQHGQEDEAREV 4 | LVWTFDSRLALKHRARELHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/Q17134.fasta: -------------------------------------------------------------------------------- 1 | MAHAGRTGYDNREIVMKYIHYKLSQRGYEWDAGDVGAAPPGAAPAPGIFSSQPGHTPHPA 2 | ASRDPVARTSPLQTPAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQLH 3 | LTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEY 4 | LNRHLHTWIQDNGGWVGALGDVSLG 5 | -------------------------------------------------------------------------------- /10/10.2/Q1A260.fasta: -------------------------------------------------------------------------------- 1 | MGKIWSKSSLVGWPEIRERIRRQTPEPAVGVGAVSQDLANRGAITTSNTKDNNQTVAWLE 2 | AQEEZEVGFPVRPQVPLRPMTYKAAFDLSFFLKEKGGLEGLVWSRKRQEILDLWVYHTQG 3 | FFPDWQNYTPGPGVRYPLCFGWCFKLVPLSEEAVEEANEGDNNALLHPICQHGVDDDHKQ 4 | VLVWRFDSSLARRHVAKELHPDFYKNC 5 | -------------------------------------------------------------------------------- /10/10.2/Q5R4V7.fasta: -------------------------------------------------------------------------------- 1 | MMQDVSSSPVSPADDSLSNSEEEPDRQQPASGKRGARKRRSSRRSAGGSAGPGGATGGGI 2 | GGGDEPGSPAQGKRGKKSAGGGGGGGAGGGGGGGGGSSSGGGSPQSYEELQTQRVMANVR 3 | ERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDELDSKMASCS 4 | YVAHERLSYAFSVWRMEGAWSMSASH 5 | -------------------------------------------------------------------------------- /10/10.2/Q5RCH1.fasta: -------------------------------------------------------------------------------- 1 | MSNEPPPPYPGGPTAPLLEEKSGAPHTPGRTSPAVMQPPPGMPLPSADIAPPPYEPPGHP 2 | VPQPGFVPPHMNADGTYMPAGFYPPPGPHPPMGYYPPGPYPPGSYPGPGGHTATVLVPSG 3 | AATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLI 4 | PCLINDFKDVTHTCPSCKAYICTYKRLC 5 | -------------------------------------------------------------------------------- /10/10.2/Q62433.fasta: -------------------------------------------------------------------------------- 1 | MGNKWSKGWPAVRERIRQTPPAPPAAEGVGAASQDLAKHGAISSSNTATNNPDCAWLEAQ 2 | EESEEVGFPVRPQVPLRPMTFKGAFDLSFFLKEKGGLDGLIYSKKRQEILDLWVYHTQGF 3 | FPDWHNYTPGPGTRYPLCFGWCFKLVPVDPREVEEANTGENNCLLHPMSQHGMDDDEREV 4 | LMWKFDSSLARKHLAREMHPEFYKD 5 | -------------------------------------------------------------------------------- /10/10.2/Q6P1Q0-5.fasta: -------------------------------------------------------------------------------- 1 | MYLFPRQLLIRHFWTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPLISDAGLRWRLTDL 2 | CTKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLTSYLPPPLLRHRLK 3 | THTTVIHQLDKALAKLGIGQLTAQEVKSACYLRGLNSTHIGEDRCRTWLGEWLQISCSLK 4 | EAELSLLLHNVVLLSTNYLGTRR 5 | -------------------------------------------------------------------------------- /10/10.2/Q70627.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSVVGWPAVRERMRRAEPAADGVGAVSRDLEKHGAITSSNTAATNADCAWLEA 2 | QEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIHHTQGY 3 | FPDWQNYTPGPGVRYPLTFGWCYKLVPVEPEKEEANKGENTSLLHPVSLHGMDDPEREVL 4 | EWRFDSRLAFHHMARELHPEYFKNC 5 | -------------------------------------------------------------------------------- /10/10.2/Q75009.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKRRAEGWQTIRERMRRAEPAEPAADGVGAVSRDLARHGAITSSNTNNADIAWLE 2 | AQEEGEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLVHSQKRQDILDLWVYHTQG 3 | FFPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDEGENNREDNSLLHPANQHGVEDSERQVL 4 | VWRFDSRLAFHHVARELHPEYFKN 5 | -------------------------------------------------------------------------------- /10/10.2/Q79671.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSVIGWPTVRERMRRAEPAADGVGAASQDLEKHGAITSSNTAATNADCAWLEA 2 | QEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGY 3 | FPDWQNYTPGPGIRYPLTFGWCYKLVPVEPEKLEEANKGENTSLLHPVSLHGMDDPEREV 4 | LEWRFDSRLAFHHVARELHPEYFKNC 5 | -------------------------------------------------------------------------------- /10/10.2/Q89842.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSVIGWPAVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAANNAACAWLEA 2 | QEEEKVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGY 3 | FPDWQNYTPGPGIRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREV 4 | LEWRFDSRLAFHHVARELHPEYFKNC 5 | -------------------------------------------------------------------------------- /10/10.2/Q94527.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKKSRVEWPEVRKRMRETPAAAKGVGAVSQDLDKYGAVTSSNTSSTNASCAWLEA 2 | QEEGDVGFPVRPQVPLRPMTYKAAFDLSFFLKEKGGLDGLIHSQKRQEILDLWVYHTQGF 3 | FPDWQNYTPGPGIRYPLTFGWCYKLVPVDPAEVEEATGGENNSLLHPICQHGVDDEEKEV 4 | LMWKFDSTLALKHRAYELHPEFYKD 5 | -------------------------------------------------------------------------------- /10/10.2/Q9IDV1.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSIVGWPAVGERMRQTPTAAEGVGAVSRDLDRRGAITSSNTRTTNPDLAWLEA 2 | QEEEEVGFPVRPQVPVRPMTYKAAVDLSHFLKEKGGLEGLIYSKKRGDTLDLWVYHTQGY 3 | FPDWQNYTPGPGIRYPLTLGWCFKLVPVDPEEVEKANEGENNCLLHPMSQHGMEDEDREV 4 | LRWKFDSSLALRHIARERHPEFYQD 5 | -------------------------------------------------------------------------------- /10/10.2/Q9QBY1.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSRMGGWSTIRERMRRAEPVAEGVGAVSRDLDRRGAVTINNTASTNRDAAWLEA 2 | QEDGEEVGFPVRPQVPLRPMTYKGAFDLSHFLKEKGGLDGLIYSKQRQDILDLWVYNTQG 3 | YFPDWQNYTPGPGERFPLTFGWCFKLVPVNPQEVEQANEGENNSLLHPMSLHGMEDDGRE 4 | VLMWKFDSRLALTHLARVKHPEYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/Q9QBZ3.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSVVGWPTVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAATNAACAWLEA 2 | QEEEEVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGY 3 | FPDWQNYTPGPGVRYPLTFGWCYKLVPVEPDKVEEANKGENTSLLHPVSLHGMDDPEREV 4 | LEWRFDSRLAFHHVARELHPEYFKNC 5 | -------------------------------------------------------------------------------- /10/10.2/Q9WV70.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKSSVVGWPAVRERMRRAEPAADGVGAASRDLEKHGAITSSNTAANNAACAWLEA 2 | QEEEKVGFPVTPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGY 3 | FPDWQNYTPGPGIRYPLTFGWRYKLVPVEPEKLEEANKGENTSLLHPVSLHGMDDPEREV 4 | LEWRFDSRLAFHHVARELHPEYFKNC 5 | -------------------------------------------------------------------------------- /10/10.2/D3ZEF4.fasta: -------------------------------------------------------------------------------- 1 | MPVAVMADNAFSFRKLLDQCENQELEAPGGIATPPVYGQLLALYLLQNDMNNARYLWKRI 2 | PPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFAL 3 | VSQAYTSIIADDFAAFVGLPVEEAVKGVLEQGWQADSTTRMVLPRKPASGTLDVSLNRFI 4 | PLSEPAPVPPIPNEQQLARLTDYVAFLEN 5 | -------------------------------------------------------------------------------- /10/10.2/E9Q5F9.fasta: -------------------------------------------------------------------------------- 1 | MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQ 2 | FIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDS 3 | HSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQNFFR 4 | QQTESLLQLLTPAYITKKRGEWKDLITTLAKK 5 | -------------------------------------------------------------------------------- /10/10.2/O95388.fasta: -------------------------------------------------------------------------------- 1 | MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLP 2 | YGWEQETDENGQVFFVDHINKRTTYLDPRLAFTVDDNPTKPTTRQRYDGSTTAMEILQGR 3 | DFTGKVVVVTGANSGIGKASCHVGRTLKHTRVEELSLLPTAINRELPPPCTVLLSQNWRV 4 | WEGCTSTTAAAACPHQKLRAKRRPGPCGRSARG 5 | -------------------------------------------------------------------------------- /10/10.2/P04601.fasta: -------------------------------------------------------------------------------- 1 | MGGKWSKRSMGGWSAIRERMRRAEPRAEPAADGVGAVSRDLEKHGAITSSNTAATNADCA 2 | WLEAQEEEEVGFPVRPQVPLRPMTYKAALDISHFLKEKGGLEGLIWSQRRQEILDLWIYH 3 | TQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPEKVEEANEGENNSLLHPMSLHGMEDA 4 | EKEVLVWRFDSKLAFHHMARELHPEYYKDC 5 | -------------------------------------------------------------------------------- /10/10.2/P04637-9.fasta: -------------------------------------------------------------------------------- 1 | MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQ 2 | HLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPIL 3 | TIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNT 4 | SSSPQPKKKPLDGEYFTLQDQTSFQKENC 5 | -------------------------------------------------------------------------------- /10/10.2/P10407.fasta: -------------------------------------------------------------------------------- 1 | MCPGNWLWASMTFMARFSRGSSRSPVRTRGSLEEMPSVHHPFLNVFELERLLYTGKTACN 2 | HADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHNRWRGTPEAYEGLGIRYLGVEAHD 3 | SPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHFTLVEAIK 4 | KVKDHRGITPNRGFLRQLLALDRRLRQGLEA 5 | -------------------------------------------------------------------------------- /10/10.2/P20886.fasta: -------------------------------------------------------------------------------- 1 | MGNAWSKSKFAGWSEVRDRMRRSSSDPQQPCAPGVGAVSRELATRGGISSSHTPQNNAAL 2 | AFLDSHKDEDVGFPVRPQVPLRPMTFKAAFDLSFFLKEKGGLDGLIYSHKRAEILDLWIY 3 | HTQGFFPDWQCYTPGPGPRFPLTFGWLFKLVPVSAEEAERLGNTNEDASLLHPACNHGAE 4 | DAHGEILKWQFDRSLGLTHIALQKHPELFPK 5 | -------------------------------------------------------------------------------- /10/10.2/P30405-2.fasta: -------------------------------------------------------------------------------- 1 | MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG 2 | RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI 3 | YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDV 4 | VKKIESFGSKSGRTSKKIVITDCGQLS 5 | -------------------------------------------------------------------------------- /10/10.2/P70618.fasta: -------------------------------------------------------------------------------- 1 | MGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILD 2 | FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTGAGGRPWGDEGQGPRLALDWLCMPG 3 | LRGQARSPRMWDPHSKVALQRPLEHDGCWPPLAVQLWTSPCLGGLGMAEEGVCPSWGLDV 4 | TVGLLEEGRGVGTLMEVPSPSHSGYLVRGLHHG 5 | -------------------------------------------------------------------------------- /10/10.2/P99029-2.fasta: -------------------------------------------------------------------------------- 1 | MLQLGLRVLGCKASSVLRASTCLAGRAGRKEAGWECGGARSFSSSAVTMAPIKVGDAIPS 2 | VEVFEGEPGKKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVA 3 | CLSVNDVFVIEEWGRAHQAEGKVRLLADPTGAFGKATDLLLDDSLVSLFGNRRLKRFSMV 4 | IDNGIVKALNVEPDGTGLTCSLAPNILSQL 5 | -------------------------------------------------------------------------------- /10/10.2/Q15544-2.fasta: -------------------------------------------------------------------------------- 1 | MDDAHESPSDKGGETGESDETAAVPGDPGATDTDGIPEETDGDADVDLKEAAAEEGELES 2 | QDVSDLTTVEREDSSLLNPAAKKLKIDTKEKKEKKQKVDEDEIQKMQILVSSFSEEQLNR 3 | YEMYRRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMP 4 | PLQPKHMREAVRRLKSKGQIPNSKHKKIIFF 5 | -------------------------------------------------------------------------------- /10/10.2/Q2EF73.fasta: -------------------------------------------------------------------------------- 1 | MQVAAGTRGDTRLQEVALLPQLFDLLVLGQRRARLLRQVPSALAGKDLAQLQAGATLAGY 2 | RRAHGPEELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYP 3 | FKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLR 4 | ADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD 5 | -------------------------------------------------------------------------------- /10/10.2/Q4R4Q3.fasta: -------------------------------------------------------------------------------- 1 | MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE 2 | KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD 3 | DLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQK 4 | PADPLIWLADWLLKNNPNKPKLCHHPIVEEPY 5 | -------------------------------------------------------------------------------- /10/10.2/Q58D45-2.fasta: -------------------------------------------------------------------------------- 1 | MSNDPPPPYPGGPTAPLLEEKSGAPPTPGRTSPAVMQPPPGMSLPPADIGPPPYEPPGHP 2 | MPQPGFIPPHVNADGTYMPSGFYPPPGPHPPMGYYPPGPYPPGPYAGPGGHTATVLVPSG 3 | AATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLI 4 | PCLINDFKDVTHTCPSCKAYIYTYKRLC 5 | -------------------------------------------------------------------------------- /10/10.2/Q62151-6.fasta: -------------------------------------------------------------------------------- 1 | MPAGTAARAWVLVLALWGAVAGGQNITARIGEPLVLSCKGAPKKPPQQLEWKLNTGRTEA 2 | WKVLSPQGGPWDSVARILPNGSLLLPATGIVDEGTFRCRATNRRGKEVKSNYRVRVYQIP 3 | GKPEIVDPASELTASVPNKVGTCVSEGSYPAGTLSWHLDGKLLIPDGKETLVKEETRRHP 4 | ETGLFTLRAELNQSEEAEMPENGAGGP 5 | -------------------------------------------------------------------------------- /10/10.2/Q64373-4.fasta: -------------------------------------------------------------------------------- 1 | MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEAERETPSAINGNPSWHLA 2 | DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY 3 | QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEP 4 | WIQENGGWVRTTPLVCPPLACVSLLCEHP 5 | -------------------------------------------------------------------------------- /10/10.2/Q6P4Z9.fasta: -------------------------------------------------------------------------------- 1 | MPVAVMAESAFSFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRI 2 | PPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRDATRRRAFAL 3 | VSQAYTSIVADDFAAFVGLPVEEAVKGILEQGWQADSTTRMVLPRKPVAGALDVSFNKFI 4 | PLSEPAPVPPIPNEQQLARLTDYVAFLEN 5 | -------------------------------------------------------------------------------- /10/10.2/Q6ZQ88.fasta: -------------------------------------------------------------------------------- 1 | MGCCVSSEPQEEGGRKTGEKLKKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLR 2 | AEVSSGSERGKKLSAIMEKGELVPLDTVLDMLRDAMLAKVDSSNGFLIDGYPREVKQGEE 3 | FEQKIGQPTLLLYVDAGAETMTQRLLKRGETSGRVDDNEETIKKRLETYYNATEPVISFY 4 | DKRGIVRKVNAEGTVDTVFSEVCTYLDSLK 5 | -------------------------------------------------------------------------------- /10/10.2/Q86XK2-5.fasta: -------------------------------------------------------------------------------- 1 | MNSVRAANRRPRRVSRPRPVQQQQQQPPQQPPPQPPQQQPPQQQPPPPPQQQQQQQPPPP 2 | PPPPPPLPQERNNVGERDDDVPADMVAEESGPGAQNSPYQLRRKTLLPKRTACPTKNSME 3 | GASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCRAA 4 | CVCKRFSELANDPILWLGEVAHAYNPSTLGG 5 | --------------------------------------------------------------------------------